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The map label for this gene is ycdQ [C]

Identifier: 150009627

GI number: 150009627

Start: 3641597

End: 3642583

Strand: Direct

Name: ycdQ [C]

Synonym: BDI_3041

Alternate gene names: 150009627

Gene position: 3641597-3642583 (Clockwise)

Preceding gene: 150009626

Following gene: 150009628

Centisome position: 75.69

GC content: 46.61

Gene sequence:

>987_bases
GTGATACCGTCTGTAGAGGGTATCCTCAATCTTTTTTATACAAAAGATATGCGTTTATATTCCATTATAATTCCTGTTTA
TAACAGGCCGGATGAGCTTGATGATCTGTTATCAAGCCTTTGCAAGCAAACCTATGTCCATTTTGAGGTTATCGTGGTGG
AGGATGGCTCTACGATACCGGCGAAAGAGATCGTAAGGCGATACCAAGAGCGGTTGGACCTCCATTATTGTGTGATCTCG
AACTCCGGCCCGGGTATGGCGCGTAATCATGGCGCTAGGCAAGCGCATGGCGAGTATCTGCTCATACTGGATTCTGACGT
GGTACTACCCTCCACGTGGCTTGAGCATATACACGACTCGTTGAATCATTATCCGGTGGATGCGTTCGGTGGTCCGGATA
AGGCGCATGCCTCGTTTTCCCCGATCCAGAAGGCGATCAATTACGCCATGACCTCATTCCTGACGACCGGTGGTATCCGC
GGCGGGAAGAAAAAGTTGGATAAATTTTATCCCCGTAGTTTTAATATGGGAATAAGGCGGGATGTATATGAGCGTCTGGG
CGGTTTTTCCGGCATGCGATATGGTGAGGACATTGATTTTAGCATACGGATCATGGAGGCTGGTTATCGGACCCGGCTAT
TTCCTTCGGCATGGGTTTATCATAAAAGGCGGACGGATCTCATGCAGTTCTTCCGTCAGGTGCGTCATTCGGGGGAGGCC
CGGATTGCGTTGAACCGGAAACATCCCGGCTCATTGAAATTGGTACATTGCTTACCGGCATTATTCACGTTTTCAGTCTG
TCTATTGGTTATCAGTTCATTCTTTTGCCGCTTGTTTCTGGTGCCTCTTATTATTTATGCCCTTTTATTGTTTGTAGACG
CAATGTTCCGCAATAAATGTGATTTACGTGTAGGATCGCTATCCGTAATAGCCTCTTTTACGCAATTGTTTGGATATGGT
ACTGGGTTCCTTAGAAGTATTATTTGA

Upstream 100 bases:

>100_bases
TTCTTTGGTAGTAGACGGACAGTTGATCTCAACGAAACGTATGCTATTGGTACAATAATATTTATTTCTATTGAAGCTAT
AGTTTTTTTGATAAGATTGA

Downstream 100 bases:

>100_bases
ATGTTTATCTATTTATATTTTAGAACAACTTATATGAAAACAACAAGACTTTTTTCTTTCTTAATTTTAATTAGTTTAGT
ATCAAACGCAAATGCTCAAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MIPSVEGILNLFYTKDMRLYSIIIPVYNRPDELDDLLSSLCKQTYVHFEVIVVEDGSTIPAKEIVRRYQERLDLHYCVIS
NSGPGMARNHGARQAHGEYLLILDSDVVLPSTWLEHIHDSLNHYPVDAFGGPDKAHASFSPIQKAINYAMTSFLTTGGIR
GGKKKLDKFYPRSFNMGIRRDVYERLGGFSGMRYGEDIDFSIRIMEAGYRTRLFPSAWVYHKRRTDLMQFFRQVRHSGEA
RIALNRKHPGSLKLVHCLPALFTFSVCLLVISSFFCRLFLVPLIIYALLLFVDAMFRNKCDLRVGSLSVIASFTQLFGYG
TGFLRSII

Sequences:

>Translated_328_residues
MIPSVEGILNLFYTKDMRLYSIIIPVYNRPDELDDLLSSLCKQTYVHFEVIVVEDGSTIPAKEIVRRYQERLDLHYCVIS
NSGPGMARNHGARQAHGEYLLILDSDVVLPSTWLEHIHDSLNHYPVDAFGGPDKAHASFSPIQKAINYAMTSFLTTGGIR
GGKKKLDKFYPRSFNMGIRRDVYERLGGFSGMRYGEDIDFSIRIMEAGYRTRLFPSAWVYHKRRTDLMQFFRQVRHSGEA
RIALNRKHPGSLKLVHCLPALFTFSVCLLVISSFFCRLFLVPLIIYALLLFVDAMFRNKCDLRVGSLSVIASFTQLFGYG
TGFLRSII
>Mature_328_residues
MIPSVEGILNLFYTKDMRLYSIIIPVYNRPDELDDLLSSLCKQTYVHFEVIVVEDGSTIPAKEIVRRYQERLDLHYCVIS
NSGPGMARNHGARQAHGEYLLILDSDVVLPSTWLEHIHDSLNHYPVDAFGGPDKAHASFSPIQKAINYAMTSFLTTGGIR
GGKKKLDKFYPRSFNMGIRRDVYERLGGFSGMRYGEDIDFSIRIMEAGYRTRLFPSAWVYHKRRTDLMQFFRQVRHSGEA
RIALNRKHPGSLKLVHCLPALFTFSVCLLVISSFFCRLFLVPLIIYALLLFVDAMFRNKCDLRVGSLSVIASFTQLFGYG
TGFLRSII

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=287, Percent_Identity=27.5261324041812, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790044, Length=91, Percent_Identity=39.5604395604396, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 37469; Mature: 37469

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSVEGILNLFYTKDMRLYSIIIPVYNRPDELDDLLSSLCKQTYVHFEVIVVEDGSTIP
CCCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCC
AKEIVRRYQERLDLHYCVISNSGPGMARNHGARQAHGEYLLILDSDVVLPSTWLEHIHDS
HHHHHHHHHHHCCEEEEEEECCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
LNHYPVDAFGGPDKAHASFSPIQKAINYAMTSFLTTGGIRGGKKKLDKFYPRSFNMGIRR
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHH
DVYERLGGFSGMRYGEDIDFSIRIMEAGYRTRLFPSAWVYHKRRTDLMQFFRQVRHSGEA
HHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE
RIALNRKHPGSLKLVHCLPALFTFSVCLLVISSFFCRLFLVPLIIYALLLFVDAMFRNKC
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLRVGSLSVIASFTQLFGYGTGFLRSII
CCEECHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MIPSVEGILNLFYTKDMRLYSIIIPVYNRPDELDDLLSSLCKQTYVHFEVIVVEDGSTIP
CCCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCC
AKEIVRRYQERLDLHYCVISNSGPGMARNHGARQAHGEYLLILDSDVVLPSTWLEHIHDS
HHHHHHHHHHHCCEEEEEEECCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
LNHYPVDAFGGPDKAHASFSPIQKAINYAMTSFLTTGGIRGGKKKLDKFYPRSFNMGIRR
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHH
DVYERLGGFSGMRYGEDIDFSIRIMEAGYRTRLFPSAWVYHKRRTDLMQFFRQVRHSGEA
HHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE
RIALNRKHPGSLKLVHCLPALFTFSVCLLVISSFFCRLFLVPLIIYALLLFVDAMFRNKC
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLRVGSLSVIASFTQLFGYGTGFLRSII
CCEECHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA