| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009614
Identifier: 150009614
GI number: 150009614
Start: 3624094
End: 3625653
Strand: Direct
Name: 150009614
Synonym: BDI_3027
Alternate gene names: NA
Gene position: 3624094-3625653 (Clockwise)
Preceding gene: 150009613
Following gene: 150009615
Centisome position: 75.32
GC content: 30.13
Gene sequence:
>1560_bases ATGTTTTCCTTATCAGTATTATTATTAATGTCTTGTGTAGAGGAAATAGATTATAGTTTACCAAGAAATGAAGTAAGCCG TAATATTACCACTGTTAGTAGTGATACAATAACAAATCATGAATTATTAGAAGAATTTAGTAAGGCATTAGCTTATAGTT TAGATTCTTCAATAGAATTAAGGCGTATTATTAAAAATGAAGCTTTAAAGATGTTTGATTATGATTATGATGTATTATAT TTATCTATTAATTCTTATAGATTAACTTCTGGAAAAACGGTTGATGAATTAATGAGCTTGTATATGGATATAACTAGATT AGAAAAAATAAAACAATTATTTTCAACCTTAACTATATTTGTACCAGAATTGCCTGATAACAGTTTTTCTGCTGAACTTT GGAATGTGGAGAGTGAAGTTCCATATACAGCTTTAAGAGTTAAAAATAGTAATGATGTAATGGGCTATGGAGTAAATAAA GAATTCTTAATACCATCAAATGAAATTCCTAAATATCCTATTGTAGTAGTGAAGTTAAATGAAAGAGTGGTTTCTGTAAA TAAGGCTCAAAGGAATTTGTCACCGATGAGTATTATAAATCCTGATATTGTATTCTTTAGTGATGTATTTGATAATACAG AGAATGCTTCTTCAGTCATACAGAATAGAAATTTTTCTAGTGGTGATACTAGAGATCGCACAGGATCAATACCTGAAAAT ATGAAAAAGGTTTATGAAGCCTACGACGTATTTGCTGCAACAAATGAATGGCCGAGAGATTATATATATTATGGCTTGAC TCCTCAACAGCCAAAAGGACCTTTCAATCGAGATTTTAAGGAAAGTTTGGTGTATTTTAAATTATTAGGAGATCCACGTA CAGTTATGAACAAAATTTGTGATCAAAGTGAAGATCCTAGAATTGATGGAAATACTCATCAAGAAACAGGAGGTGGTCGT CCCGGAGGTAGTACTATTCTTACACCATGGACAGACGGATCACTTGAATTTATAGTAAAAGTGTATGTTGCAAATCAAGC TGGTATAGGTAATGAATATATTAACAATTTTATAGCTAAACCATCTGCATTGTTTAAAATAACACCAAAAGATCCGCTTA GTAGTAAATTCGAAGTTAAATCAATAGAGTTAACAGATGGAATAGCTTTGGACCTTCCATTATTCGAATGGAATATAGAG AATTATGGTGCAATAATAAAAATAGCGATAGAAGAACTAGATATTAGTGAAACTATTCAAAGTGTAGAATCTTCAACAGC TACATTTGCAACTAATTTTGGATTTGATCCATCTTTTGGAGAAAAAGTAAAGATTGGTTTAAAATTTGGAGCTACAGCAA CTACATCAAAAACAGTTTCATATACAGTTACTAAAAGTTTAGCTAGTGATGAATTAGGTCAAGTTATTGTTAATTTTGAA GATAAAATCCTAAAATCAAAGAAGAATTTATCAACTGGAAGGGATTGGAAACCTGACTATACAGATAAATATAGGACTGG ATGGTATCAATTAGCACTAAGTCCATTAAAATATAATTAA
Upstream 100 bases:
>100_bases ACAGATGGTTATAACAATGTATATGGATTCTTATTTCTATAGATTTTATTAATTAAAATATTAATTATAAATAATAGTTA TTATAAAAATAATTAAAATA
Downstream 100 bases:
>100_bases TTTTTGTGGTTTGATATTTTTTTGACTGTAATATGTAGAGATAATCTTAAAAATAATATCTATATTTAAGATAGAATGTA CGAACTGATTCTGTTAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MFSLSVLLLMSCVEEIDYSLPRNEVSRNITTVSSDTITNHELLEEFSKALAYSLDSSIELRRIIKNEALKMFDYDYDVLY LSINSYRLTSGKTVDELMSLYMDITRLEKIKQLFSTLTIFVPELPDNSFSAELWNVESEVPYTALRVKNSNDVMGYGVNK EFLIPSNEIPKYPIVVVKLNERVVSVNKAQRNLSPMSIINPDIVFFSDVFDNTENASSVIQNRNFSSGDTRDRTGSIPEN MKKVYEAYDVFAATNEWPRDYIYYGLTPQQPKGPFNRDFKESLVYFKLLGDPRTVMNKICDQSEDPRIDGNTHQETGGGR PGGSTILTPWTDGSLEFIVKVYVANQAGIGNEYINNFIAKPSALFKITPKDPLSSKFEVKSIELTDGIALDLPLFEWNIE NYGAIIKIAIEELDISETIQSVESSTATFATNFGFDPSFGEKVKIGLKFGATATTSKTVSYTVTKSLASDELGQVIVNFE DKILKSKKNLSTGRDWKPDYTDKYRTGWYQLALSPLKYN
Sequences:
>Translated_519_residues MFSLSVLLLMSCVEEIDYSLPRNEVSRNITTVSSDTITNHELLEEFSKALAYSLDSSIELRRIIKNEALKMFDYDYDVLY LSINSYRLTSGKTVDELMSLYMDITRLEKIKQLFSTLTIFVPELPDNSFSAELWNVESEVPYTALRVKNSNDVMGYGVNK EFLIPSNEIPKYPIVVVKLNERVVSVNKAQRNLSPMSIINPDIVFFSDVFDNTENASSVIQNRNFSSGDTRDRTGSIPEN MKKVYEAYDVFAATNEWPRDYIYYGLTPQQPKGPFNRDFKESLVYFKLLGDPRTVMNKICDQSEDPRIDGNTHQETGGGR PGGSTILTPWTDGSLEFIVKVYVANQAGIGNEYINNFIAKPSALFKITPKDPLSSKFEVKSIELTDGIALDLPLFEWNIE NYGAIIKIAIEELDISETIQSVESSTATFATNFGFDPSFGEKVKIGLKFGATATTSKTVSYTVTKSLASDELGQVIVNFE DKILKSKKNLSTGRDWKPDYTDKYRTGWYQLALSPLKYN >Mature_519_residues MFSLSVLLLMSCVEEIDYSLPRNEVSRNITTVSSDTITNHELLEEFSKALAYSLDSSIELRRIIKNEALKMFDYDYDVLY LSINSYRLTSGKTVDELMSLYMDITRLEKIKQLFSTLTIFVPELPDNSFSAELWNVESEVPYTALRVKNSNDVMGYGVNK EFLIPSNEIPKYPIVVVKLNERVVSVNKAQRNLSPMSIINPDIVFFSDVFDNTENASSVIQNRNFSSGDTRDRTGSIPEN MKKVYEAYDVFAATNEWPRDYIYYGLTPQQPKGPFNRDFKESLVYFKLLGDPRTVMNKICDQSEDPRIDGNTHQETGGGR PGGSTILTPWTDGSLEFIVKVYVANQAGIGNEYINNFIAKPSALFKITPKDPLSSKFEVKSIELTDGIALDLPLFEWNIE NYGAIIKIAIEELDISETIQSVESSTATFATNFGFDPSFGEKVKIGLKFGATATTSKTVSYTVTKSLASDELGQVIVNFE DKILKSKKNLSTGRDWKPDYTDKYRTGWYQLALSPLKYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58614; Mature: 58614
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLSVLLLMSCVEEIDYSLPRNEVSRNITTVSSDTITNHELLEEFSKALAYSLDSSIEL CCHHHHHHHHHHHHHHHCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHH RRIIKNEALKMFDYDYDVLYLSINSYRLTSGKTVDELMSLYMDITRLEKIKQLFSTLTIF HHHHHHHHHEEECCCCEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE VPELPDNSFSAELWNVESEVPYTALRVKNSNDVMGYGVNKEFLIPSNEIPKYPIVVVKLN EECCCCCCCCHHEECCCCCCCEEEEEEECCCCEEEECCCCEEECCCCCCCCCCEEEEEEC ERVVSVNKAQRNLSPMSIINPDIVFFSDVFDNTENASSVIQNRNFSSGDTRDRTGSIPEN CEEEEEHHHHHCCCCCEECCCCEEEEEHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHH MKKVYEAYDVFAATNEWPRDYIYYGLTPQQPKGPFNRDFKESLVYFKLLGDPRTVMNKIC HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHEEEEEECCCCHHHHHHHH DQSEDPRIDGNTHQETGGGRPGGSTILTPWTDGSLEFIVKVYVANQAGIGNEYINNFIAK CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHCC PSALFKITPKDPLSSKFEVKSIELTDGIALDLPLFEWNIENYGAIIKIAIEELDISETIQ CCEEEEECCCCCCCCCEEEEEEEECCCEEEECEEEEECCCCCCEEEEEEEECCCHHHHHH SVESSTATFATNFGFDPSFGEKVKIGLKFGATATTSKTVSYTVTKSLASDELGQVIVNFE HHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHEEECCH DKILKSKKNLSTGRDWKPDYTDKYRTGWYQLALSPLKYN HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MFSLSVLLLMSCVEEIDYSLPRNEVSRNITTVSSDTITNHELLEEFSKALAYSLDSSIEL CCHHHHHHHHHHHHHHHCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHH RRIIKNEALKMFDYDYDVLYLSINSYRLTSGKTVDELMSLYMDITRLEKIKQLFSTLTIF HHHHHHHHHEEECCCCEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE VPELPDNSFSAELWNVESEVPYTALRVKNSNDVMGYGVNKEFLIPSNEIPKYPIVVVKLN EECCCCCCCCHHEECCCCCCCEEEEEEECCCCEEEECCCCEEECCCCCCCCCCEEEEEEC ERVVSVNKAQRNLSPMSIINPDIVFFSDVFDNTENASSVIQNRNFSSGDTRDRTGSIPEN CEEEEEHHHHHCCCCCEECCCCEEEEEHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHH MKKVYEAYDVFAATNEWPRDYIYYGLTPQQPKGPFNRDFKESLVYFKLLGDPRTVMNKIC HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHEEEEEECCCCHHHHHHHH DQSEDPRIDGNTHQETGGGRPGGSTILTPWTDGSLEFIVKVYVANQAGIGNEYINNFIAK CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHCC PSALFKITPKDPLSSKFEVKSIELTDGIALDLPLFEWNIENYGAIIKIAIEELDISETIQ CCEEEEECCCCCCCCCEEEEEEEECCCEEEECEEEEECCCCCCEEEEEEEECCCHHHHHH SVESSTATFATNFGFDPSFGEKVKIGLKFGATATTSKTVSYTVTKSLASDELGQVIVNFE HHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHEEECCH DKILKSKKNLSTGRDWKPDYTDKYRTGWYQLALSPLKYN HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA