Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150009600

Identifier: 150009600

GI number: 150009600

Start: 3605752

End: 3608172

Strand: Reverse

Name: 150009600

Synonym: BDI_3013

Alternate gene names: NA

Gene position: 3608172-3605752 (Counterclockwise)

Preceding gene: 150009601

Following gene: 150009592

Centisome position: 74.99

GC content: 48.33

Gene sequence:

>2421_bases
ATGAAAAAGATAGGACTAATGTTGGCCTTATTATGGGTGATTTGTGCGCTCTCGTGGGCTTCTTCTCCGAATGCCCGTAT
TAAGGGGCAGTTAATAGATGCCTCTACGAATCAAGTGATTAATTATGCGGATATCTTTCTGTTTGCGATGGGAAGTGAAA
AACCTTTGCAACAGACTTTTCCGGACGATCAAGGACGTTTCTCGTTTACTAAGGTGGCTCCGGGTAATTATGTGGTCATG
GTCCGTCTGATGGGATATGATGTGTTTACAAAGAATGATATCATCTTGGATGCCTCGTCTCCGGTGGATTTAGGTAAGTT
GATGATGAGTCCCTTGGAGGTAGGTATCGCCGAAGTGGAGGTAGTGGCCGAGAAACGCCAATTGGTTTATAAGTTGGATA
AGAAAGTGGTCGAGGCCTCTTCCAATATGATGGGAGGAGGCGGTTCCGCGGTGGATATATTAGAGAATACGCCTTCCATA
CGGGTAGACGCGGAAGGCGATGTTACTTTTCGTGGAAGCAGCGGCTTTTTGGTTTACATAGATGGTAAGCCGAGTGTCTT
CTCGGGTACACAGGCTTTGGAGCAAGTCCCGGCCGGGCATATAGAGAATATAGAGATTATCACGACACCTTCCGCCAAGC
ATGATACGGAAGGCGACGTAGGTATCATTAATATTATCACGAAGAAGCATTCCCAGCGGGGATTGAGTGGGATGGTGAAT
CTCTCGGGAAGTACGTGGCTTTCCCGCCATGTCGATTTCTTGTTGGCACAGCAACATCAGCGTTCCCGTTGGTACATCGG
CGGACAGTGGACAGACCGGTTGCGCAAGAGTGATTTCGACCAAGAGAAGATGACGGTGGTGGGCGATCAGACCACTACCT
CGCATTCCGTCGGGCCTCGTACGGGAAACAGCTATCATTATACGATGAAAGGCGGTTGGAGCCTGAATCTTCCCAAGACA
ACCATCGCGTTGGATCTGGAGGGCGGCTATGGCGGAAATAAGCGTAAGGGAGAAATGAACTATAAGGAAACCCGTTCGGT
AGCGGGCGGCTCTCCGGTGACGGAAGATTATCGAAGCATAGATGATTATGATAATGATGAGAATATAGGTTTGGGAAGTC
TGGCGGTACAGCATAAGTTCAACGATAAGGGACACGAGCTTTCCGGTAGTGCCTATTACAAATATGGCGGTCATGCCTTG
GAATATTTCTTTAACGACTTGATGTCCTTGGAAGGGCAACGCCAACAGGGGCACCGTGCTTATGAGGCCGAGCACCGGGA
AACGATGCGTATCAATCTGGATTACGCCTTGCCTTTCGGAAAAGGAGGTAAGCTAGAGGCGGGTTACCAATATTATTCTT
ATCTGGAAGACGGCGATTACAATATGGAATGGTGGGACCCCAAGGGACAAACGTTCTTTTGGCGTGATGATATCTACAAC
ACGTTTTATTTTCAAGAAGGGGTGAATTCTATCTATACGATTCTTTCCCATACGTGGAAGAATTTAGAGGCGCAAGCCGG
CGTTCGGGGAGAGCATACGCATACGGTCTTGCGAAGTTCCGTGGAGGGAGCGGATCGTACGAAGAATCGTTTTGAGTTTT
TCCCATCGGTGCATTTGGGCTATACGTTCCCGAATGAGCATCGTTTGTTGGCTTCCTATTCCCGTCGTACCACACGTCCG
CAGCTTTTCTATATGGAGCCTTATATCACGTATCGCGACTTTTATACGGCCGAGATCGGTAATCCGGATATACGTCCGGA
GTACATCAACTCCTTTGAATTGAACTACCGGAAGAGTTTCGGGGAAAACACGGTATCCGCCACCGCCTTTCATCGGTATC
GGAAGGATAAGATCGAGCGGTTGCGTGTTCCCTATTCAGCCGGTGTAACCTTGGATTCGATGGCGAACGTAGGGCATGAT
TACTCGACGGGTATCGAGCTAAGCGTCAGTCTGCATCCGGTACGCTGGTGGAATACCACGGTCAACGGAAACGTTTATCA
CTATAAGGTGAAGAACGAACAGGCCGCCGGTGGAAATACGACCTCTAGCACCAATTATGATATCCTATGGAATAACCTGT
TTAATCTGGGGAAATACACACGTATCCAATTGGATGGTAGTTTTGTAGGCCCTTCCGTAACGACGCAGGGCCGTACGGAC
GCTTATTGGTACGCGAACGTAGCCGTCCGCCAGCAACTATGTAACCGAAAACTAACCGCCACCTTAGCTTTCCGGGATAT
TTTCCGTTCCGCCAAATATATCAGCGATATCCAAACGGCAGATTTACGCTCCCTGACACGTATCAAACCCAAATATCCAC
AAATCACGTTGACGTTGAGTTGGACATTTAATAGTTTCAAGGCTAAATCCACCCAAGCGAAAGAAGATCGCTCGGAGATG
TTTGAGGGTATAAAGCATTGA

Upstream 100 bases:

>100_bases
ATCCCGGGAAAGAATATATCAAGAATGATCGCTATTAATTACCGTAACATTCTGAATTTAGTTACTTTTGCGTAGAAATC
TAATTGTAATTCTCAATATC

Downstream 100 bases:

>100_bases
TATTGTATCTTTACTATATTGGTTTGTCTTCGCGAAACAACTACGATTGCAAATAAATTCTGCAGTCGTAGTTGTTTCCC
TCTTTTACGGATGGTGGAAT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; NB-Dependent Receptor Exported Protein; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; NB Dependent Receptor; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Outer Membrane Receptor Protein Mostly Fe Transport; Outer Membrane Receptor Family Transporter; Protein Containing nB-Dependent Receptor Plug Domain

Number of amino acids: Translated: 806; Mature: 806

Protein sequence:

>806_residues
MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTFPDDQGRFSFTKVAPGNYVVM
VRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVEVVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSI
RVDAEGDVTFRGSSGFLVYIDGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN
LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPRTGNSYHYTMKGGWSLNLPKT
TIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSIDDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHAL
EYFFNDLMSLEGQRQQGHRAYEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN
TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLGYTFPNEHRLLASYSRRTTRP
QLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSFGENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHD
YSTGIELSVSLHPVRWWNTTVNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD
AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLSWTFNSFKAKSTQAKEDRSEM
FEGIKH

Sequences:

>Translated_806_residues
MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTFPDDQGRFSFTKVAPGNYVVM
VRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVEVVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSI
RVDAEGDVTFRGSSGFLVYIDGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN
LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPRTGNSYHYTMKGGWSLNLPKT
TIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSIDDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHAL
EYFFNDLMSLEGQRQQGHRAYEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN
TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLGYTFPNEHRLLASYSRRTTRP
QLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSFGENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHD
YSTGIELSVSLHPVRWWNTTVNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD
AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLSWTFNSFKAKSTQAKEDRSEM
FEGIKH
>Mature_806_residues
MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTFPDDQGRFSFTKVAPGNYVVM
VRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVEVVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSI
RVDAEGDVTFRGSSGFLVYIDGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN
LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPRTGNSYHYTMKGGWSLNLPKT
TIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSIDDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHAL
EYFFNDLMSLEGQRQQGHRAYEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN
TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLGYTFPNEHRLLASYSRRTTRP
QLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSFGENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHD
YSTGIELSVSLHPVRWWNTTVNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD
AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLSWTFNSFKAKSTQAKEDRSEM
FEGIKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91294; Mature: 91294

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTF
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHCC
PDDQGRFSFTKVAPGNYVVMVRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVE
CCCCCCEEEEEECCCCEEEEEEEECCEEEECCCEEEECCCCCHHHHHHHHHHHCCHHHHH
VVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSIRVDAEGDVTFRGSSGFLVYI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCEEEEE
DGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN
CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE
LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPR
CCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
TGNSYHYTMKGGWSLNLPKTTIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSI
CCCEEEEEEECCEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHC
DDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHALEYFFNDLMSLEGQRQQGHRA
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHCCCCH
YEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN
HHCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCH
TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLG
HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHEECCCEEEE
YTFPNEHRLLASYSRRTTRPQLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSF
EECCCCCHHHHHHHHCCCCCEEEEECCEEEEECEEEEECCCCCCCHHHCCCEEEEHHHHC
GENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHDYSTGIELSVSLHPVRWWNTT
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHCCCCCCCCEEEEEEEEEEEEEEEE
VNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD
ECCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEEECCCEECCCCCCCCCCC
AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLS
EEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEE
WTFNSFKAKSTQAKEDRSEMFEGIKH
EEECCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTF
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHCC
PDDQGRFSFTKVAPGNYVVMVRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVE
CCCCCCEEEEEECCCCEEEEEEEECCEEEECCCEEEECCCCCHHHHHHHHHHHCCHHHHH
VVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSIRVDAEGDVTFRGSSGFLVYI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCEEEEE
DGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN
CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE
LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPR
CCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
TGNSYHYTMKGGWSLNLPKTTIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSI
CCCEEEEEEECCEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHC
DDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHALEYFFNDLMSLEGQRQQGHRA
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHCCCCH
YEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN
HHCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCH
TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLG
HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHEECCCEEEE
YTFPNEHRLLASYSRRTTRPQLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSF
EECCCCCHHHHHHHHCCCCCEEEEECCEEEEECEEEEECCCCCCCHHHCCCEEEEHHHHC
GENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHDYSTGIELSVSLHPVRWWNTT
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHCCCCCCCCEEEEEEEEEEEEEEEE
VNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD
ECCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEEECCCEECCCCCCCCCCC
AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLS
EEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEE
WTFNSFKAKSTQAKEDRSEMFEGIKH
EEECCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA