| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009600
Identifier: 150009600
GI number: 150009600
Start: 3605752
End: 3608172
Strand: Reverse
Name: 150009600
Synonym: BDI_3013
Alternate gene names: NA
Gene position: 3608172-3605752 (Counterclockwise)
Preceding gene: 150009601
Following gene: 150009592
Centisome position: 74.99
GC content: 48.33
Gene sequence:
>2421_bases ATGAAAAAGATAGGACTAATGTTGGCCTTATTATGGGTGATTTGTGCGCTCTCGTGGGCTTCTTCTCCGAATGCCCGTAT TAAGGGGCAGTTAATAGATGCCTCTACGAATCAAGTGATTAATTATGCGGATATCTTTCTGTTTGCGATGGGAAGTGAAA AACCTTTGCAACAGACTTTTCCGGACGATCAAGGACGTTTCTCGTTTACTAAGGTGGCTCCGGGTAATTATGTGGTCATG GTCCGTCTGATGGGATATGATGTGTTTACAAAGAATGATATCATCTTGGATGCCTCGTCTCCGGTGGATTTAGGTAAGTT GATGATGAGTCCCTTGGAGGTAGGTATCGCCGAAGTGGAGGTAGTGGCCGAGAAACGCCAATTGGTTTATAAGTTGGATA AGAAAGTGGTCGAGGCCTCTTCCAATATGATGGGAGGAGGCGGTTCCGCGGTGGATATATTAGAGAATACGCCTTCCATA CGGGTAGACGCGGAAGGCGATGTTACTTTTCGTGGAAGCAGCGGCTTTTTGGTTTACATAGATGGTAAGCCGAGTGTCTT CTCGGGTACACAGGCTTTGGAGCAAGTCCCGGCCGGGCATATAGAGAATATAGAGATTATCACGACACCTTCCGCCAAGC ATGATACGGAAGGCGACGTAGGTATCATTAATATTATCACGAAGAAGCATTCCCAGCGGGGATTGAGTGGGATGGTGAAT CTCTCGGGAAGTACGTGGCTTTCCCGCCATGTCGATTTCTTGTTGGCACAGCAACATCAGCGTTCCCGTTGGTACATCGG CGGACAGTGGACAGACCGGTTGCGCAAGAGTGATTTCGACCAAGAGAAGATGACGGTGGTGGGCGATCAGACCACTACCT CGCATTCCGTCGGGCCTCGTACGGGAAACAGCTATCATTATACGATGAAAGGCGGTTGGAGCCTGAATCTTCCCAAGACA ACCATCGCGTTGGATCTGGAGGGCGGCTATGGCGGAAATAAGCGTAAGGGAGAAATGAACTATAAGGAAACCCGTTCGGT AGCGGGCGGCTCTCCGGTGACGGAAGATTATCGAAGCATAGATGATTATGATAATGATGAGAATATAGGTTTGGGAAGTC TGGCGGTACAGCATAAGTTCAACGATAAGGGACACGAGCTTTCCGGTAGTGCCTATTACAAATATGGCGGTCATGCCTTG GAATATTTCTTTAACGACTTGATGTCCTTGGAAGGGCAACGCCAACAGGGGCACCGTGCTTATGAGGCCGAGCACCGGGA AACGATGCGTATCAATCTGGATTACGCCTTGCCTTTCGGAAAAGGAGGTAAGCTAGAGGCGGGTTACCAATATTATTCTT ATCTGGAAGACGGCGATTACAATATGGAATGGTGGGACCCCAAGGGACAAACGTTCTTTTGGCGTGATGATATCTACAAC ACGTTTTATTTTCAAGAAGGGGTGAATTCTATCTATACGATTCTTTCCCATACGTGGAAGAATTTAGAGGCGCAAGCCGG CGTTCGGGGAGAGCATACGCATACGGTCTTGCGAAGTTCCGTGGAGGGAGCGGATCGTACGAAGAATCGTTTTGAGTTTT TCCCATCGGTGCATTTGGGCTATACGTTCCCGAATGAGCATCGTTTGTTGGCTTCCTATTCCCGTCGTACCACACGTCCG CAGCTTTTCTATATGGAGCCTTATATCACGTATCGCGACTTTTATACGGCCGAGATCGGTAATCCGGATATACGTCCGGA GTACATCAACTCCTTTGAATTGAACTACCGGAAGAGTTTCGGGGAAAACACGGTATCCGCCACCGCCTTTCATCGGTATC GGAAGGATAAGATCGAGCGGTTGCGTGTTCCCTATTCAGCCGGTGTAACCTTGGATTCGATGGCGAACGTAGGGCATGAT TACTCGACGGGTATCGAGCTAAGCGTCAGTCTGCATCCGGTACGCTGGTGGAATACCACGGTCAACGGAAACGTTTATCA CTATAAGGTGAAGAACGAACAGGCCGCCGGTGGAAATACGACCTCTAGCACCAATTATGATATCCTATGGAATAACCTGT TTAATCTGGGGAAATACACACGTATCCAATTGGATGGTAGTTTTGTAGGCCCTTCCGTAACGACGCAGGGCCGTACGGAC GCTTATTGGTACGCGAACGTAGCCGTCCGCCAGCAACTATGTAACCGAAAACTAACCGCCACCTTAGCTTTCCGGGATAT TTTCCGTTCCGCCAAATATATCAGCGATATCCAAACGGCAGATTTACGCTCCCTGACACGTATCAAACCCAAATATCCAC AAATCACGTTGACGTTGAGTTGGACATTTAATAGTTTCAAGGCTAAATCCACCCAAGCGAAAGAAGATCGCTCGGAGATG TTTGAGGGTATAAAGCATTGA
Upstream 100 bases:
>100_bases ATCCCGGGAAAGAATATATCAAGAATGATCGCTATTAATTACCGTAACATTCTGAATTTAGTTACTTTTGCGTAGAAATC TAATTGTAATTCTCAATATC
Downstream 100 bases:
>100_bases TATTGTATCTTTACTATATTGGTTTGTCTTCGCGAAACAACTACGATTGCAAATAAATTCTGCAGTCGTAGTTGTTTCCC TCTTTTACGGATGGTGGAAT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; NB-Dependent Receptor Exported Protein; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; NB Dependent Receptor; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Outer Membrane Receptor Protein Mostly Fe Transport; Outer Membrane Receptor Family Transporter; Protein Containing nB-Dependent Receptor Plug Domain
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTFPDDQGRFSFTKVAPGNYVVM VRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVEVVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSI RVDAEGDVTFRGSSGFLVYIDGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPRTGNSYHYTMKGGWSLNLPKT TIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSIDDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHAL EYFFNDLMSLEGQRQQGHRAYEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLGYTFPNEHRLLASYSRRTTRP QLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSFGENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHD YSTGIELSVSLHPVRWWNTTVNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLSWTFNSFKAKSTQAKEDRSEM FEGIKH
Sequences:
>Translated_806_residues MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTFPDDQGRFSFTKVAPGNYVVM VRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVEVVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSI RVDAEGDVTFRGSSGFLVYIDGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPRTGNSYHYTMKGGWSLNLPKT TIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSIDDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHAL EYFFNDLMSLEGQRQQGHRAYEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLGYTFPNEHRLLASYSRRTTRP QLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSFGENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHD YSTGIELSVSLHPVRWWNTTVNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLSWTFNSFKAKSTQAKEDRSEM FEGIKH >Mature_806_residues MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTFPDDQGRFSFTKVAPGNYVVM VRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVEVVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSI RVDAEGDVTFRGSSGFLVYIDGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPRTGNSYHYTMKGGWSLNLPKT TIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSIDDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHAL EYFFNDLMSLEGQRQQGHRAYEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLGYTFPNEHRLLASYSRRTTRP QLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSFGENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHD YSTGIELSVSLHPVRWWNTTVNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLSWTFNSFKAKSTQAKEDRSEM FEGIKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91294; Mature: 91294
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTF CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHCC PDDQGRFSFTKVAPGNYVVMVRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVE CCCCCCEEEEEECCCCEEEEEEEECCEEEECCCEEEECCCCCHHHHHHHHHHHCCHHHHH VVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSIRVDAEGDVTFRGSSGFLVYI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCEEEEE DGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPR CCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC TGNSYHYTMKGGWSLNLPKTTIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSI CCCEEEEEEECCEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHC DDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHALEYFFNDLMSLEGQRQQGHRA CCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHCCCCH YEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN HHCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCH TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLG HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHEECCCEEEE YTFPNEHRLLASYSRRTTRPQLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSF EECCCCCHHHHHHHHCCCCCEEEEECCEEEEECEEEEECCCCCCCHHHCCCEEEEHHHHC GENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHDYSTGIELSVSLHPVRWWNTT CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHCCCCCCCCEEEEEEEEEEEEEEEE VNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD ECCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEEECCCEECCCCCCCCCCC AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLS EEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEE WTFNSFKAKSTQAKEDRSEMFEGIKH EEECCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKKIGLMLALLWVICALSWASSPNARIKGQLIDASTNQVINYADIFLFAMGSEKPLQQTF CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHCC PDDQGRFSFTKVAPGNYVVMVRLMGYDVFTKNDIILDASSPVDLGKLMMSPLEVGIAEVE CCCCCCEEEEEECCCCEEEEEEEECCEEEECCCEEEECCCCCHHHHHHHHHHHCCHHHHH VVAEKRQLVYKLDKKVVEASSNMMGGGGSAVDILENTPSIRVDAEGDVTFRGSSGFLVYI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCEEEEE DGKPSVFSGTQALEQVPAGHIENIEIITTPSAKHDTEGDVGIINIITKKHSQRGLSGMVN CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE LSGSTWLSRHVDFLLAQQHQRSRWYIGGQWTDRLRKSDFDQEKMTVVGDQTTTSHSVGPR CCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC TGNSYHYTMKGGWSLNLPKTTIALDLEGGYGGNKRKGEMNYKETRSVAGGSPVTEDYRSI CCCEEEEEEECCEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHC DDYDNDENIGLGSLAVQHKFNDKGHELSGSAYYKYGGHALEYFFNDLMSLEGQRQQGHRA CCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHCCCCH YEAEHRETMRINLDYALPFGKGGKLEAGYQYYSYLEDGDYNMEWWDPKGQTFFWRDDIYN HHCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCH TFYFQEGVNSIYTILSHTWKNLEAQAGVRGEHTHTVLRSSVEGADRTKNRFEFFPSVHLG HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHEECCCEEEE YTFPNEHRLLASYSRRTTRPQLFYMEPYITYRDFYTAEIGNPDIRPEYINSFELNYRKSF EECCCCCHHHHHHHHCCCCCEEEEECCEEEEECEEEEECCCCCCCHHHCCCEEEEHHHHC GENTVSATAFHRYRKDKIERLRVPYSAGVTLDSMANVGHDYSTGIELSVSLHPVRWWNTT CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHCCCCCCCCEEEEEEEEEEEEEEEE VNGNVYHYKVKNEQAAGGNTTSSTNYDILWNNLFNLGKYTRIQLDGSFVGPSVTTQGRTD ECCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEEECCCEECCCCCCCCCCC AYWYANVAVRQQLCNRKLTATLAFRDIFRSAKYISDIQTADLRSLTRIKPKYPQITLTLS EEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEE WTFNSFKAKSTQAKEDRSEMFEGIKH EEECCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA