| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is nanM [H]
Identifier: 150009536
GI number: 150009536
Start: 3531439
End: 3532629
Strand: Direct
Name: nanM [H]
Synonym: BDI_2949
Alternate gene names: 150009536
Gene position: 3531439-3532629 (Clockwise)
Preceding gene: 150009535
Following gene: 150009537
Centisome position: 73.4
GC content: 53.23
Gene sequence:
>1191_bases ATGCATAATAAACAACAAATCACCGGTTGGCTGTTCTTCCTGCTACTCTGCGTAGCGGGATGCGGCCAGCCTGTATCTAA AAAACAGAACACCATGATAAACTGGACAAAATTACCGGATCTACCGGGAGCAGCCGATACGGCTTCCCTTGGCGTTTCCG CCCCGTTCGCCGGCATCCATAACGGTGTATTGATCGTTGCCGGAGGTTGTAACTTTCCGGACAAACCCGTCACCGAGGGA GGAGCCAAGCGATATTATAGCGAGATATTCGTCCTTCTTCCCGAAGGCTGGAAAGAGATCGACCGACTGCCTCGTCCCGT CGCCTACGGCGCTACGGTTTCCACCCCGGAAGGTATCGTTTGCATCGGAGGAAACAACAGTGATTCTTCCTTGGTCGAGG TCTCCCACATCTCCTATAACCCCACGAAAGGAGAGGTAGCGGTTTGCGCCTTACCCTCCTTACCGTCTCCAATGGATAAT CTCTCGGCCGCTTTTACCGGACAGGAGATTTACGTAGCAGGTGGAAATGAGAACGGACAACCCTGCCATACCTTCTTACG CCTCAACCTAGCGAATATCGAAAAGGGATGGGAACAACTACCGGACTTCCCGGGAGCAGCCCGTGTACAACCGGTATTAG CGGCCGGAGAAAGTCCCAACGGCACACGTATCTATCTAGCCGGAGGCTTCCAGCCCATCCTAAACGAAGAGGAACCGATC GTCCCGACGGATGTATTGGTATTCGACCCGGCAACTTTTACCTGGCAACAAGAGACCGTTCTTCCCCCGTTTAAGGACGG AGCGAACCGTACCCTAACAGGAGGCTGTGCCGTGACTTTCCAAACGGATAAAATCTTATTTATGGGAGGTGTGAACTACG ATTGTTTCCTAGCCGCCATCGCCCGACCGATCCATTTAGCGAAAGCGGAGGCGGCGCGAGATTCAGCGGCCATTACCCGC CTAGAAGCGGAGGCCAAGGCCTATATGCACCATCCGGTAGAATGGTACCGATTCAATACCACCTTACTCCAATACGACCT ATCCACGAAAGCATGGAGCGATCTGGGCGAATATGAGCAGTTGGCCCGTGCCGGAGCGGGAGCGGTTATCCAAGATGGCC GATTAACCATCATCAACGGAGAATTGAAACCGGGTATCCGCACGCCGCAAGTGAATCAAGCGAAATTATAA
Upstream 100 bases:
>100_bases GAAGCTGGTACGCTACGGCTGGCAACCCTTCACGAGAGCGAATCTTGTAAACGAGGCGGGTATGCCGGCCTCTACGTTCC GGGCTATAAAAGAATAAGCT
Downstream 100 bases:
>100_bases TAGGGATTTAGTGGGATCGCTGGTAAGTTTGCCAACGATCCCTGTTTACTTTTCCCACCCGATTTTCAGTATCCGGAGTC TATTTAGAGCATACGTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: N-acetylneuraminate mutarotase; Neu5Ac mutarotase; Sialic acid epimerase [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MHNKQQITGWLFFLLLCVAGCGQPVSKKQNTMINWTKLPDLPGAADTASLGVSAPFAGIHNGVLIVAGGCNFPDKPVTEG GAKRYYSEIFVLLPEGWKEIDRLPRPVAYGATVSTPEGIVCIGGNNSDSSLVEVSHISYNPTKGEVAVCALPSLPSPMDN LSAAFTGQEIYVAGGNENGQPCHTFLRLNLANIEKGWEQLPDFPGAARVQPVLAAGESPNGTRIYLAGGFQPILNEEEPI VPTDVLVFDPATFTWQQETVLPPFKDGANRTLTGGCAVTFQTDKILFMGGVNYDCFLAAIARPIHLAKAEAARDSAAITR LEAEAKAYMHHPVEWYRFNTTLLQYDLSTKAWSDLGEYEQLARAGAGAVIQDGRLTIINGELKPGIRTPQVNQAKL
Sequences:
>Translated_396_residues MHNKQQITGWLFFLLLCVAGCGQPVSKKQNTMINWTKLPDLPGAADTASLGVSAPFAGIHNGVLIVAGGCNFPDKPVTEG GAKRYYSEIFVLLPEGWKEIDRLPRPVAYGATVSTPEGIVCIGGNNSDSSLVEVSHISYNPTKGEVAVCALPSLPSPMDN LSAAFTGQEIYVAGGNENGQPCHTFLRLNLANIEKGWEQLPDFPGAARVQPVLAAGESPNGTRIYLAGGFQPILNEEEPI VPTDVLVFDPATFTWQQETVLPPFKDGANRTLTGGCAVTFQTDKILFMGGVNYDCFLAAIARPIHLAKAEAARDSAAITR LEAEAKAYMHHPVEWYRFNTTLLQYDLSTKAWSDLGEYEQLARAGAGAVIQDGRLTIINGELKPGIRTPQVNQAKL >Mature_396_residues MHNKQQITGWLFFLLLCVAGCGQPVSKKQNTMINWTKLPDLPGAADTASLGVSAPFAGIHNGVLIVAGGCNFPDKPVTEG GAKRYYSEIFVLLPEGWKEIDRLPRPVAYGATVSTPEGIVCIGGNNSDSSLVEVSHISYNPTKGEVAVCALPSLPSPMDN LSAAFTGQEIYVAGGNENGQPCHTFLRLNLANIEKGWEQLPDFPGAARVQPVLAAGESPNGTRIYLAGGFQPILNEEEPI VPTDVLVFDPATFTWQQETVLPPFKDGANRTLTGGCAVTFQTDKILFMGGVNYDCFLAAIARPIHLAKAEAARDSAAITR LEAEAKAYMHHPVEWYRFNTTLLQYDLSTKAWSDLGEYEQLARAGAGAVIQDGRLTIINGELKPGIRTPQVNQAKL
Specific function: Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, whic
COG id: COG3055
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 7 Kelch repeats [H]
Homologues:
Organism=Escherichia coli, GI87082419, Length=243, Percent_Identity=28.8065843621399, Blast_Score=82, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015915 - InterPro: IPR006652 - InterPro: IPR019936 [H]
Pfam domain/function: PF01344 Kelch_1 [H]
EC number: NA
Molecular weight: Translated: 42653; Mature: 42653
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNKQQITGWLFFLLLCVAGCGQPVSKKQNTMINWTKLPDLPGAADTASLGVSAPFAGIH CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCC NGVLIVAGGCNFPDKPVTEGGAKRYYSEIFVLLPEGWKEIDRLPRPVAYGATVSTPEGIV CCEEEEECCCCCCCCCCCCCHHHHHEEEEEEECCCCHHHHHHCCCCEECCCEECCCCCEE CIGGNNSDSSLVEVSHISYNPTKGEVAVCALPSLPSPMDNLSAAFTGQEIYVAGGNENGQ EECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHEECCCEEEEECCCCCCC PCHTFLRLNLANIEKGWEQLPDFPGAARVQPVLAAGESPNGTRIYLAGGFQPILNEEEPI CEEEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCHHHCCCCCCC VPTDVLVFDPATFTWQQETVLPPFKDGANRTLTGGCAVTFQTDKILFMGGVNYDCFLAAI CCCEEEEECCCCEEECCCCCCCCCCCCCCCEEECCEEEEEECCEEEEEECCCHHHHHHHH ARPIHLAKAEAARDSAAITRLEAEAKAYMHHPVEWYRFNTTLLQYDLSTKAWSDLGEYEQ HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCHHHHHHHHHHHH LARAGAGAVIQDGRLTIINGELKPGIRTPQVNQAKL HHHCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MHNKQQITGWLFFLLLCVAGCGQPVSKKQNTMINWTKLPDLPGAADTASLGVSAPFAGIH CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCC NGVLIVAGGCNFPDKPVTEGGAKRYYSEIFVLLPEGWKEIDRLPRPVAYGATVSTPEGIV CCEEEEECCCCCCCCCCCCCHHHHHEEEEEEECCCCHHHHHHCCCCEECCCEECCCCCEE CIGGNNSDSSLVEVSHISYNPTKGEVAVCALPSLPSPMDNLSAAFTGQEIYVAGGNENGQ EECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHEECCCEEEEECCCCCCC PCHTFLRLNLANIEKGWEQLPDFPGAARVQPVLAAGESPNGTRIYLAGGFQPILNEEEPI CEEEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCHHHCCCCCCC VPTDVLVFDPATFTWQQETVLPPFKDGANRTLTGGCAVTFQTDKILFMGGVNYDCFLAAI CCCEEEEECCCCEEECCCCCCCCCCCCCCCEEECCEEEEEECCEEEEEECCCHHHHHHHH ARPIHLAKAEAARDSAAITRLEAEAKAYMHHPVEWYRFNTTLLQYDLSTKAWSDLGEYEQ HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCHHHHHHHHHHHH LARAGAGAVIQDGRLTIINGELKPGIRTPQVNQAKL HHHCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA