| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is exuT [H]
Identifier: 150009530
GI number: 150009530
Start: 3519374
End: 3520624
Strand: Direct
Name: exuT [H]
Synonym: BDI_2943
Alternate gene names: 150009530
Gene position: 3519374-3520624 (Clockwise)
Preceding gene: 150009529
Following gene: 150009531
Centisome position: 73.15
GC content: 46.92
Gene sequence:
>1251_bases ATGAAAAATAAGAAATTATATCCTTGGATCGTAGTCGGTTTACTATGGGTTGTCGCCTTACTGAACTATATGGATCGCCA GATGCTATCAACCATGAAATCAGCTATGATGGTGGATATCGTGGAACTAGAGTCTGCGGCGAACTTCGGACGTTTGATGG CGGTCTTCCTCTGGATCTACGGATTCATGAGCCCTGTAGCCGGTATGGTGGCAGACAGGGTAAACAGGAAGTGGCTAATC GTGGGTAGCTTATTTGTCTGGTCCTTCGTGACTTTGATGATGGGGTATTGCACGGATTTCAATCAGATCTATTACCTACG TGCCTTGATGGGGGTCAGTGAGGCCCTGTATATTCCTGCCGGATTATCGCTTATCACAGATTATCACCAAGAGAAAACAC GCTCATTAGCCGTAGGTATCCATATGACAGGTCTATACGTAGGCCAAGCCTTGGGGGGATTCGGAGCTACGGTGGCCAGC GCTTATACGTGGGAAACGACTTTCCATTGGTTTGGTATCATCGGCATCGCTTATAGCGTGGTCTTGATCATCTTCTTACA CGATAAGAAAGATCATGTGGAACAAGCCGTAAAACTGGAAAATTATCCGAAAGAGAATCCGATTTCCGGTGCGTTTAAAG GATTAGGGATGTTATTCACGAACATCGCTTTTTGGATCATTCTTCTTTATTTCGCCACGCCGAGCTTACCGGGTTGGGCG ACAAAGAACTGGCTCCCTACCCTATTCGCTGAAAATCTCTCGTTGGATATGTCCGAGGCCGGTCCGTTATCTACATTCAC GATCGCTATCTCTTCCTTTATAGGGGTAATCGCCGGAGGTATTTTATCCGATAAATGGATCCAGCGGAATGTCCGGGGAC GTGTATACACAGGCGCCATCGGTTTGGCATTAACGATACCCTCTCTCCTATTACTAGGATTTGGGCACAACTTCCCGATG ATTATCGGCGGTGGTCTTTGCTTCGGTATCGGTTATGGTATATTCGACGCCAATAATATGCCTATCCTTTGCCAATTCAT CTCCCCCCGTTATCGGGCTACAGCCTATGGAATTATGAATATGACCGGTGTATTTGCCGGAGCCGCCATCACGGATATAC TAGGAAAATCTACCGACGCTGGTAATCTTGGCCATGACTTCGCCATGCTAGCCGGATTGGTACTCATCGCACTTTTAATC CAAGTGATCTTCTTACGTCCGAAAGTCGCTAATATGACCGACGAATGCTAA
Upstream 100 bases:
>100_bases TATCTAAAATACTGAAAATTGGTCAATTGACATCAGGGGTCACAACCGTGGCTCCTGATGTTTCTAAGGCTTTGTTTTCC TTTTTATTTTCCTCAATCAA
Downstream 100 bases:
>100_bases TTAATCTCATCCAATAAACTAAATAAACAACAAAAAAGTAATTCATTATGAAGAAGAATCTACTGCTCTTAATGCTTGCG CTCCTACTTCCGGCATTTAT
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKNKKLYPWIVVGLLWVVALLNYMDRQMLSTMKSAMMVDIVELESAANFGRLMAVFLWIYGFMSPVAGMVADRVNRKWLI VGSLFVWSFVTLMMGYCTDFNQIYYLRALMGVSEALYIPAGLSLITDYHQEKTRSLAVGIHMTGLYVGQALGGFGATVAS AYTWETTFHWFGIIGIAYSVVLIIFLHDKKDHVEQAVKLENYPKENPISGAFKGLGMLFTNIAFWIILLYFATPSLPGWA TKNWLPTLFAENLSLDMSEAGPLSTFTIAISSFIGVIAGGILSDKWIQRNVRGRVYTGAIGLALTIPSLLLLGFGHNFPM IIGGGLCFGIGYGIFDANNMPILCQFISPRYRATAYGIMNMTGVFAGAAITDILGKSTDAGNLGHDFAMLAGLVLIALLI QVIFLRPKVANMTDEC
Sequences:
>Translated_416_residues MKNKKLYPWIVVGLLWVVALLNYMDRQMLSTMKSAMMVDIVELESAANFGRLMAVFLWIYGFMSPVAGMVADRVNRKWLI VGSLFVWSFVTLMMGYCTDFNQIYYLRALMGVSEALYIPAGLSLITDYHQEKTRSLAVGIHMTGLYVGQALGGFGATVAS AYTWETTFHWFGIIGIAYSVVLIIFLHDKKDHVEQAVKLENYPKENPISGAFKGLGMLFTNIAFWIILLYFATPSLPGWA TKNWLPTLFAENLSLDMSEAGPLSTFTIAISSFIGVIAGGILSDKWIQRNVRGRVYTGAIGLALTIPSLLLLGFGHNFPM IIGGGLCFGIGYGIFDANNMPILCQFISPRYRATAYGIMNMTGVFAGAAITDILGKSTDAGNLGHDFAMLAGLVLIALLI QVIFLRPKVANMTDEC >Mature_416_residues MKNKKLYPWIVVGLLWVVALLNYMDRQMLSTMKSAMMVDIVELESAANFGRLMAVFLWIYGFMSPVAGMVADRVNRKWLI VGSLFVWSFVTLMMGYCTDFNQIYYLRALMGVSEALYIPAGLSLITDYHQEKTRSLAVGIHMTGLYVGQALGGFGATVAS AYTWETTFHWFGIIGIAYSVVLIIFLHDKKDHVEQAVKLENYPKENPISGAFKGLGMLFTNIAFWIILLYFATPSLPGWA TKNWLPTLFAENLSLDMSEAGPLSTFTIAISSFIGVIAGGILSDKWIQRNVRGRVYTGAIGLALTIPSLLLLGFGHNFPM IIGGGLCFGIGYGIFDANNMPILCQFISPRYRATAYGIMNMTGVFAGAAITDILGKSTDAGNLGHDFAMLAGLVLIALLI QVIFLRPKVANMTDEC
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Escherichia coli, GI2367379, Length=256, Percent_Identity=26.5625, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789515, Length=306, Percent_Identity=23.8562091503268, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789152, Length=331, Percent_Identity=25.0755287009063, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082320, Length=292, Percent_Identity=22.6027397260274, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71992409, Length=431, Percent_Identity=24.8259860788863, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193209775, Length=416, Percent_Identity=21.6346153846154, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17569727, Length=295, Percent_Identity=24.0677966101695, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17557872, Length=409, Percent_Identity=23.2273838630807, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI17864456, Length=222, Percent_Identity=26.5765765765766, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654039, Length=222, Percent_Identity=26.5765765765766, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654041, Length=222, Percent_Identity=26.5765765765766, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654044, Length=219, Percent_Identity=26.9406392694064, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654037, Length=222, Percent_Identity=26.5765765765766, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45760; Mature: 45760
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKKLYPWIVVGLLWVVALLNYMDRQMLSTMKSAMMVDIVELESAANFGRLMAVFLWIY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GFMSPVAGMVADRVNRKWLIVGSLFVWSFVTLMMGYCTDFNQIYYLRALMGVSEALYIPA HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC GLSLITDYHQEKTRSLAVGIHMTGLYVGQALGGFGATVASAYTWETTFHWFGIIGIAYSV CHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCHHHHHHHHEEHHHHHHHHHHHHHHHHH VLIIFLHDKKDHVEQAVKLENYPKENPISGAFKGLGMLFTNIAFWIILLYFATPSLPGWA HHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TKNWLPTLFAENLSLDMSEAGPLSTFTIAISSFIGVIAGGILSDKWIQRNVRGRVYTGAI CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHH GLALTIPSLLLLGFGHNFPMIIGGGLCFGIGYGIFDANNMPILCQFISPRYRATAYGIMN HHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCEECCCCCCEEEEECCCCHHHHHHHHHH MTGVFAGAAITDILGKSTDAGNLGHDFAMLAGLVLIALLIQVIFLRPKVANMTDEC HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKNKKLYPWIVVGLLWVVALLNYMDRQMLSTMKSAMMVDIVELESAANFGRLMAVFLWIY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GFMSPVAGMVADRVNRKWLIVGSLFVWSFVTLMMGYCTDFNQIYYLRALMGVSEALYIPA HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC GLSLITDYHQEKTRSLAVGIHMTGLYVGQALGGFGATVASAYTWETTFHWFGIIGIAYSV CHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCHHHHHHHHEEHHHHHHHHHHHHHHHHH VLIIFLHDKKDHVEQAVKLENYPKENPISGAFKGLGMLFTNIAFWIILLYFATPSLPGWA HHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TKNWLPTLFAENLSLDMSEAGPLSTFTIAISSFIGVIAGGILSDKWIQRNVRGRVYTGAI CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHH GLALTIPSLLLLGFGHNFPMIIGGGLCFGIGYGIFDANNMPILCQFISPRYRATAYGIMN HHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCEECCCCCCEEEEECCCCHHHHHHHHHH MTGVFAGAAITDILGKSTDAGNLGHDFAMLAGLVLIALLIQVIFLRPKVANMTDEC HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]