| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is epsH [H]
Identifier: 150009518
GI number: 150009518
Start: 3506301
End: 3506612
Strand: Direct
Name: epsH [H]
Synonym: BDI_2931
Alternate gene names: 150009518
Gene position: 3506301-3506612 (Clockwise)
Preceding gene: 150009517
Following gene: 150009519
Centisome position: 72.88
GC content: 47.76
Gene sequence:
>312_bases TTGACCACATGCATAGATTCCTTGATGTACCAAGGCGATCTGCACTTGGAGATTGTCTTGGTGGATGATGGCTCGACCGA CTTATCCAGAAAGATCGCTGACGAATACGCTAAGAAAGAGGATCGTATCAAGGTGATTCATCAAGAGAACGAGGGAGCGT CCGCTGCCCGTAACCCAGGTTTGGAGATTGCCCAAGGTGAGTATATCGCTTTTTTAGATAGCGAAGACTGGATAAGTTGG AAGGACAAACATGGGTCAGCTGGCATCTGGAGTCCGAAAAGGATGATCTGGGAATCAACGACCCGGAAATAA
Upstream 100 bases:
>100_bases TCAAAGCGTTCCATATGGTCTTAGAAGCTCATCCTAATAGTCGTTTGCTGATAGCCGGTAACGGTGATTATACAAGGGCC TTCCAAGAAGCAAAAAATAT
Downstream 100 bases:
>100_bases ACGAACTATTCGACCTTTTGATAAGTGACCCACAAGATAGCAAGATAGCGAGAGGAAACAACATCCATTGCTAAGCCTTT GCCTAAATTATGTAAATAAC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTTCIDSLMYQGDLHLEIVLVDDGSTDLSRKIADEYAKKEDRIKVIHQENEGASAARNPGLEIAQGEYIAFLDSEDWISW KDKHGSAGIWSPKRMIWESTTRK
Sequences:
>Translated_103_residues MTTCIDSLMYQGDLHLEIVLVDDGSTDLSRKIADEYAKKEDRIKVIHQENEGASAARNPGLEIAQGEYIAFLDSEDWISW KDKHGSAGIWSPKRMIWESTTRK >Mature_102_residues TTCIDSLMYQGDLHLEIVLVDDGSTDLSRKIADEYAKKEDRIKVIHQENEGASAARNPGLEIAQGEYIAFLDSEDWISWK DKHGSAGIWSPKRMIWESTTRK
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=74, Percent_Identity=48.6486486486487, Blast_Score=79, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 11712; Mature: 11581
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTCIDSLMYQGDLHLEIVLVDDGSTDLSRKIADEYAKKEDRIKVIHQENEGASAARNPG CCHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC LEIAQGEYIAFLDSEDWISWKDKHGSAGIWSPKRMIWESTTRK CEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEECCCCCC >Mature Secondary Structure TTCIDSLMYQGDLHLEIVLVDDGSTDLSRKIADEYAKKEDRIKVIHQENEGASAARNPG CHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC LEIAQGEYIAFLDSEDWISWKDKHGSAGIWSPKRMIWESTTRK CEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]