| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is luxQ [H]
Identifier: 150009502
GI number: 150009502
Start: 3484001
End: 3486088
Strand: Direct
Name: luxQ [H]
Synonym: BDI_2915
Alternate gene names: 150009502
Gene position: 3484001-3486088 (Clockwise)
Preceding gene: 150009499
Following gene: 150009505
Centisome position: 72.41
GC content: 46.22
Gene sequence:
>2088_bases ATGAAACGATATCTAATACATTTATGCTTATTATTTATGTCCTTTGTCGTTTCATCTCAAACGACTACACCAGACTCGCT TAAAAGCGCCTTGCAAAAAACGACCTCCGAGCGCACAAGGCTGGAAATCCTCGCCAACTTGATGGATATCTCACGAAACG ATGACATATTAGTAAACGCTAAACAACTCTATCAGGAAGCCTTAAAAGCGAATGACAATTACTATAAGGAAGCGGCATTG ACCGAGATTCTCCGGCATTATATCAACACGGACCAAACCGATAGCGCAAATGTCTATATCGCCAAAGCCGAGCAGGAGCT AAAAGGAGAAGCCAGAACCAGCCTCGTATCGTTCATGAAAATGATCCAAGATACGCGCGTCATATTCTACACATCCGGTG AACCAAGAAGGAAAGTCCTCATGAATTGCCTATTCAAGCTGGAGGAACCCGACAAATTGTCTCCCTATGAGAAAATAGCC TGCAATTATGTACTTGGTATGGCTGTCAGCAACAGCGTCATGGAGGAGAACATGCTTAAGGAGGACTTCAAGCAAGGGAA AGAATATTTCGACAACGTCTTGACCGAGGCTGAAAAACTGCCCCTACGATACGCATACAATTTCTTGCCTAACACCTATT TCATGCTATGCGCCTACGCTGCCGACCCTTGGGAGAGAGGGAAATACGCAACCCGCTATCTCAATACGATCTTAGGATAC TCCAATATCCCGGAGATGAGCAAACGTCCTTACGCGACTAACAAGCGCCACTTGCTAAGCGCCTACTCCAACCTCGCCAT CAGCGCCGAGGCTATCGGGAAGGATTTGGCCACTTCTTATTTCCATGAGTTCCAAAAGTTATTGAAGGCTTATCCGGAGG CGGCTAGCACCACCCCGGAATACGAGCTATACTATACTTCCGCCAATTATTACCTAAACATCAAGGACTACATGAAATTC ATTGAGTTCAGCGACTCCTTGATCAATTTCTCCAAACAAATACCGCTTTACAAGGAGCATGTAATCGCCTATGTATCCGC AAAAGCCGCCGCCTACGACAGCCTCCGGATGTACAAGGAGGCCTATGAGACATCCAAAGAGTATGCGGTATTGCTAGATA CCTTGCGTATGCAAGAACTCCGGAAGAAAATGGAAAATCTCGAGATCGAGAAAGGGGCGAACGAGTTGGTGATCGAAAAG AGATCATTGGAATTGGAATTGCAGAAAAGCAAGAAGGAGAATTACCTATATATATCCCTATTGCTTCTAGCCTTATGCGC CGTGTTCTATATCTTTTTCCGGCTAGGCAAAATGAGATCCCTCTATCGGGCATTGCAGAAGTCTAACGAGCTGGTCTTGA TAGCGAACCAGAAAGCACAAGAGAGCGAGGAGATGAAGACCGCCTTCATCCGGAATATGTCGCATGAGATACGGACTCCC TTAAACGCGATCAACGGTTTCTCGGAACTCATCACCAACGACGATATCTCCATGGACGAGAAACAGGCTTTCAGCCGTAT TATCTATGAAAACTGTTACCATTTGACTTCCATGCTGAACAATCTCCTTGAGATCGCCCAGCTCGATAGCGGCAATGATT CCCTTCCTCTTGTTCCCACACGTATCCATGAGCTTTGTATACATGAGATGCAACAGGTAAAGAAATATCAAGAGAAGCCG GAGATCAACTATGTGGTGGAAGGCGATAAGGAGAATGATATGGTCTTGACCAACCGTGCTTATTTCAGTTTGATCATCTC GCATCTGCTGGCAAACGCGAATAAATTCACGGAGAAAGGAAGCATCACGCTTTCATACCATCTGGATAGCGGAGCCAATT TAGTGACCCTGTCGGTAACAGATACGGGTTGCGGCATCCCTCAAGACAAGCAGGAATGGATATTCGAGCGTTTCACGAAG ACCAATGATTTCATTCCCGGCTCTGGCCTGGGGCTTTACCTATGTCGCTTGATCGTTAACCGGCTAAACGGTAAGATAAA GACAGATCCGTCTTATACGAAAGGCTCACGCTTCGTTATCACGATGCCAATCGCCACGCCGTCCAAGCCCTCCGAACCTA CCGATTAA
Upstream 100 bases:
>100_bases TCAATTGTTTGTTTTTCTAACTATTTAATAGCTTTTTTATGGTGAGATTACGTATATTTGCATTTGTAATACAATAAACA CAACAAGAGATTCTATTTGT
Downstream 100 bases:
>100_bases CGAAAGAAACGTCCTACGTACGGGAGTTCTCGTAAAGGTAAATCCCTTTTAACCATAAACGCGATGAATACGCCTAATAA GATTGTACGGTATCCCAACC
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MKRYLIHLCLLFMSFVVSSQTTTPDSLKSALQKTTSERTRLEILANLMDISRNDDILVNAKQLYQEALKANDNYYKEAAL TEILRHYINTDQTDSANVYIAKAEQELKGEARTSLVSFMKMIQDTRVIFYTSGEPRRKVLMNCLFKLEEPDKLSPYEKIA CNYVLGMAVSNSVMEENMLKEDFKQGKEYFDNVLTEAEKLPLRYAYNFLPNTYFMLCAYAADPWERGKYATRYLNTILGY SNIPEMSKRPYATNKRHLLSAYSNLAISAEAIGKDLATSYFHEFQKLLKAYPEAASTTPEYELYYTSANYYLNIKDYMKF IEFSDSLINFSKQIPLYKEHVIAYVSAKAAAYDSLRMYKEAYETSKEYAVLLDTLRMQELRKKMENLEIEKGANELVIEK RSLELELQKSKKENYLYISLLLLALCAVFYIFFRLGKMRSLYRALQKSNELVLIANQKAQESEEMKTAFIRNMSHEIRTP LNAINGFSELITNDDISMDEKQAFSRIIYENCYHLTSMLNNLLEIAQLDSGNDSLPLVPTRIHELCIHEMQQVKKYQEKP EINYVVEGDKENDMVLTNRAYFSLIISHLLANANKFTEKGSITLSYHLDSGANLVTLSVTDTGCGIPQDKQEWIFERFTK TNDFIPGSGLGLYLCRLIVNRLNGKIKTDPSYTKGSRFVITMPIATPSKPSEPTD
Sequences:
>Translated_695_residues MKRYLIHLCLLFMSFVVSSQTTTPDSLKSALQKTTSERTRLEILANLMDISRNDDILVNAKQLYQEALKANDNYYKEAAL TEILRHYINTDQTDSANVYIAKAEQELKGEARTSLVSFMKMIQDTRVIFYTSGEPRRKVLMNCLFKLEEPDKLSPYEKIA CNYVLGMAVSNSVMEENMLKEDFKQGKEYFDNVLTEAEKLPLRYAYNFLPNTYFMLCAYAADPWERGKYATRYLNTILGY SNIPEMSKRPYATNKRHLLSAYSNLAISAEAIGKDLATSYFHEFQKLLKAYPEAASTTPEYELYYTSANYYLNIKDYMKF IEFSDSLINFSKQIPLYKEHVIAYVSAKAAAYDSLRMYKEAYETSKEYAVLLDTLRMQELRKKMENLEIEKGANELVIEK RSLELELQKSKKENYLYISLLLLALCAVFYIFFRLGKMRSLYRALQKSNELVLIANQKAQESEEMKTAFIRNMSHEIRTP LNAINGFSELITNDDISMDEKQAFSRIIYENCYHLTSMLNNLLEIAQLDSGNDSLPLVPTRIHELCIHEMQQVKKYQEKP EINYVVEGDKENDMVLTNRAYFSLIISHLLANANKFTEKGSITLSYHLDSGANLVTLSVTDTGCGIPQDKQEWIFERFTK TNDFIPGSGLGLYLCRLIVNRLNGKIKTDPSYTKGSRFVITMPIATPSKPSEPTD >Mature_695_residues MKRYLIHLCLLFMSFVVSSQTTTPDSLKSALQKTTSERTRLEILANLMDISRNDDILVNAKQLYQEALKANDNYYKEAAL TEILRHYINTDQTDSANVYIAKAEQELKGEARTSLVSFMKMIQDTRVIFYTSGEPRRKVLMNCLFKLEEPDKLSPYEKIA CNYVLGMAVSNSVMEENMLKEDFKQGKEYFDNVLTEAEKLPLRYAYNFLPNTYFMLCAYAADPWERGKYATRYLNTILGY SNIPEMSKRPYATNKRHLLSAYSNLAISAEAIGKDLATSYFHEFQKLLKAYPEAASTTPEYELYYTSANYYLNIKDYMKF IEFSDSLINFSKQIPLYKEHVIAYVSAKAAAYDSLRMYKEAYETSKEYAVLLDTLRMQELRKKMENLEIEKGANELVIEK RSLELELQKSKKENYLYISLLLLALCAVFYIFFRLGKMRSLYRALQKSNELVLIANQKAQESEEMKTAFIRNMSHEIRTP LNAINGFSELITNDDISMDEKQAFSRIIYENCYHLTSMLNNLLEIAQLDSGNDSLPLVPTRIHELCIHEMQQVKKYQEKP EINYVVEGDKENDMVLTNRAYFSLIISHLLANANKFTEKGSITLSYHLDSGANLVTLSVTDTGCGIPQDKQEWIFERFTK TNDFIPGSGLGLYLCRLIVNRLNGKIKTDPSYTKGSRFVITMPIATPSKPSEPTD
Specific function: At low cell density, in absence of AI-2 (autoinducer 2), luxQ has a kinase activity and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=263, Percent_Identity=26.9961977186312, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1789149, Length=240, Percent_Identity=28.75, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI48994928, Length=243, Percent_Identity=26.3374485596708, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=29.7413793103448, Blast_Score=97, Evalue=5e-21, Organism=Escherichia coli, GI87081816, Length=245, Percent_Identity=26.9387755102041, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI145693157, Length=247, Percent_Identity=24.2914979757085, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1790436, Length=283, Percent_Identity=24.7349823321555, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786783, Length=315, Percent_Identity=25.3968253968254, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787894, Length=227, Percent_Identity=29.9559471365639, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1788393, Length=239, Percent_Identity=26.3598326359833, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI1788549, Length=339, Percent_Identity=22.1238938053097, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI1786600, Length=249, Percent_Identity=23.6947791164659, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 80081; Mature: 80081
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLIHLCLLFMSFVVSSQTTTPDSLKSALQKTTSERTRLEILANLMDISRNDDILVNA CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH KQLYQEALKANDNYYKEAALTEILRHYINTDQTDSANVYIAKAEQELKGEARTSLVSFMK HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHH MIQDTRVIFYTSGEPRRKVLMNCLFKLEEPDKLSPYEKIACNYVLGMAVSNSVMEENMLK HHHCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EDFKQGKEYFDNVLTEAEKLPLRYAYNFLPNTYFMLCAYAADPWERGKYATRYLNTILGY HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHCC SNIPEMSKRPYATNKRHLLSAYSNLAISAEAIGKDLATSYFHEFQKLLKAYPEAASTTPE CCCCCCCCCCCCCCHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC YELYYTSANYYLNIKDYMKFIEFSDSLINFSKQIPLYKEHVIAYVSAKAAAYDSLRMYKE EEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AYETSKEYAVLLDTLRMQELRKKMENLEIEKGANELVIEKRSLELELQKSKKENYLYISL HHHCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCHHHHHHHCCCCCEEHHHH LLLALCAVFYIFFRLGKMRSLYRALQKSNELVLIANQKAQESEEMKTAFIRNMSHEIRTP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCH LNAINGFSELITNDDISMDEKQAFSRIIYENCYHLTSMLNNLLEIAQLDSGNDSLPLVPT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH RIHELCIHEMQQVKKYQEKPEINYVVEGDKENDMVLTNRAYFSLIISHLLANANKFTEKG HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHCCCC SITLSYHLDSGANLVTLSVTDTGCGIPQDKQEWIFERFTKTNDFIPGSGLGLYLCRLIVN CEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RLNGKIKTDPSYTKGSRFVITMPIATPSKPSEPTD HHCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKRYLIHLCLLFMSFVVSSQTTTPDSLKSALQKTTSERTRLEILANLMDISRNDDILVNA CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH KQLYQEALKANDNYYKEAALTEILRHYINTDQTDSANVYIAKAEQELKGEARTSLVSFMK HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHH MIQDTRVIFYTSGEPRRKVLMNCLFKLEEPDKLSPYEKIACNYVLGMAVSNSVMEENMLK HHHCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EDFKQGKEYFDNVLTEAEKLPLRYAYNFLPNTYFMLCAYAADPWERGKYATRYLNTILGY HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHCC SNIPEMSKRPYATNKRHLLSAYSNLAISAEAIGKDLATSYFHEFQKLLKAYPEAASTTPE CCCCCCCCCCCCCCHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC YELYYTSANYYLNIKDYMKFIEFSDSLINFSKQIPLYKEHVIAYVSAKAAAYDSLRMYKE EEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AYETSKEYAVLLDTLRMQELRKKMENLEIEKGANELVIEKRSLELELQKSKKENYLYISL HHHCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCHHHHHHHCCCCCEEHHHH LLLALCAVFYIFFRLGKMRSLYRALQKSNELVLIANQKAQESEEMKTAFIRNMSHEIRTP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCH LNAINGFSELITNDDISMDEKQAFSRIIYENCYHLTSMLNNLLEIAQLDSGNDSLPLVPT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH RIHELCIHEMQQVKKYQEKPEINYVVEGDKENDMVLTNRAYFSLIISHLLANANKFTEKG HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHCCCC SITLSYHLDSGANLVTLSVTDTGCGIPQDKQEWIFERFTKTNDFIPGSGLGLYLCRLIVN CEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RLNGKIKTDPSYTKGSRFVITMPIATPSKPSEPTD HHCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301; 12176318 [H]