Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150009478

Identifier: 150009478

GI number: 150009478

Start: 3451176

End: 3451904

Strand: Direct

Name: 150009478

Synonym: BDI_2891

Alternate gene names: NA

Gene position: 3451176-3451904 (Clockwise)

Preceding gene: 150009477

Following gene: 150009479

Centisome position: 71.73

GC content: 41.43

Gene sequence:

>729_bases
ATGAAATGGCATGATTTACTTTATTTCTCCAAGGGGGAAAGGCAGGCTCTTACCCTACTCCTTTCCTTAATAGCGATGGC
ATGGATCGCAATTATCGGGACGGATTTCTACCGTTCCCAATTTCAAACAGTTCCATTGGTAAACACCGGAATCAAACAAG
ATTCCTCACAGATCTATTCGAATAAAACACCTTCAAATTCCATTCGGAAAGAAAAAGAATCCCATTCGAACGAAACTAAA
ATCCCTTCCGAAGGGAAATCCAAACGCATCCGAAGGGAATCAAAGCCCCATTTTCCCTCTTATCCCAAAGCAGAAAAATG
GCCGCAAGGAACGGTTGTCGAATTAAACTCGGCTGATACCACCGCCCTTAAAATGGTTCCGGGAATTGGTAGCGTTTTTG
CCAAGCGGATCATTAAATACAGGGACTTATTAGGAGGATTTTATTCCGTAGAACAACTAGGAGAAGTATATGGTATTGAC
GAGGATCGTTATGAAGCGATGAAATCGTGGTTTTCCGTGGACCCGTCAGTTATTAGTCATCTATTTGTCAACCAACTGTC
AGCTAAAAAACTAGCCAGTCACCCATATGTCAGTTATAAACAAGCTAGGATCATCGAAAAAATGATCCGGAAAAAAGGGA
AATTACAAGGTTGGGAGGATTTATCCCTATTGGAAGAGTTTCCGGAGCACGAACAACAACGATTACGATATTATCTTTCA
TTCCATTGA

Upstream 100 bases:

>100_bases
TGAAATGGATCACCGGTAAATAATACCGAGAATTCCTTGTCAATAGAAACGGAACTTCTACCTTTGTCGGTGGAAGTTCC
ACAAATCAAAACATAAGACT

Downstream 100 bases:

>100_bases
TATTTTCACTATGTTTGTAACAAAACATATTCTGTATGATCTATCTGAAGCAAGTAAAATTACTGGACCCGGACTTGGTA
GCCGGCGATCCCGAGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKWHDLLYFSKGERQALTLLLSLIAMAWIAIIGTDFYRSQFQTVPLVNTGIKQDSSQIYSNKTPSNSIRKEKESHSNETK
IPSEGKSKRIRRESKPHFPSYPKAEKWPQGTVVELNSADTTALKMVPGIGSVFAKRIIKYRDLLGGFYSVEQLGEVYGID
EDRYEAMKSWFSVDPSVISHLFVNQLSAKKLASHPYVSYKQARIIEKMIRKKGKLQGWEDLSLLEEFPEHEQQRLRYYLS
FH

Sequences:

>Translated_242_residues
MKWHDLLYFSKGERQALTLLLSLIAMAWIAIIGTDFYRSQFQTVPLVNTGIKQDSSQIYSNKTPSNSIRKEKESHSNETK
IPSEGKSKRIRRESKPHFPSYPKAEKWPQGTVVELNSADTTALKMVPGIGSVFAKRIIKYRDLLGGFYSVEQLGEVYGID
EDRYEAMKSWFSVDPSVISHLFVNQLSAKKLASHPYVSYKQARIIEKMIRKKGKLQGWEDLSLLEEFPEHEQQRLRYYLS
FH
>Mature_242_residues
MKWHDLLYFSKGERQALTLLLSLIAMAWIAIIGTDFYRSQFQTVPLVNTGIKQDSSQIYSNKTPSNSIRKEKESHSNETK
IPSEGKSKRIRRESKPHFPSYPKAEKWPQGTVVELNSADTTALKMVPGIGSVFAKRIIKYRDLLGGFYSVEQLGEVYGID
EDRYEAMKSWFSVDPSVISHLFVNQLSAKKLASHPYVSYKQARIIEKMIRKKGKLQGWEDLSLLEEFPEHEQQRLRYYLS
FH

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27995; Mature: 27995

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWHDLLYFSKGERQALTLLLSLIAMAWIAIIGTDFYRSQFQTVPLVNTGIKQDSSQIYS
CCHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHC
NKTPSNSIRKEKESHSNETKIPSEGKSKRIRRESKPHFPSYPKAEKWPQGTVVELNSADT
CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCC
TALKMVPGIGSVFAKRIIKYRDLLGGFYSVEQLGEVYGIDEDRYEAMKSWFSVDPSVISH
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH
LFVNQLSAKKLASHPYVSYKQARIIEKMIRKKGKLQGWEDLSLLEEFPEHEQQRLRYYLS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHC
FH
CC
>Mature Secondary Structure
MKWHDLLYFSKGERQALTLLLSLIAMAWIAIIGTDFYRSQFQTVPLVNTGIKQDSSQIYS
CCHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHC
NKTPSNSIRKEKESHSNETKIPSEGKSKRIRRESKPHFPSYPKAEKWPQGTVVELNSADT
CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCC
TALKMVPGIGSVFAKRIIKYRDLLGGFYSVEQLGEVYGIDEDRYEAMKSWFSVDPSVISH
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH
LFVNQLSAKKLASHPYVSYKQARIIEKMIRKKGKLQGWEDLSLLEEFPEHEQQRLRYYLS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHC
FH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA