| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009423
Identifier: 150009423
GI number: 150009423
Start: 3376646
End: 3378163
Strand: Direct
Name: 150009423
Synonym: BDI_2831
Alternate gene names: NA
Gene position: 3376646-3378163 (Clockwise)
Preceding gene: 150009421
Following gene: 150009428
Centisome position: 70.18
GC content: 48.22
Gene sequence:
>1518_bases ATGGATATTTTAACACAGACGATTTCGCTCCTTTTCCGCCATCGACAAACGGAGATCGGACGATTTGGGCAGGATATAGA CCATATCCAGCGCAAACAGCTGCATGCTCTGCTTTCGACGGCACGCAAGACGGAATGGGGACTCAAATATGATTATAAAA GCATTCGCTCTTATTCAGACTTCTGCCAACGTCTTCCCTTACAGACTTATGACGAGATAAAGCCGTATGTCACCCGAATG ATCAACGGAGAAAGGAATATTCTCTGGCCTTCGGTGGTGCGGTGGTACGCTAAGAGTAGCGGAACCACGAACGACAAAAG TAAATTCCTGCCCGTCACCCCCGAGATATTAAAGGGTTGCCACTATAAAGGCGGCTTTGATTGCGTAGCCATTTATCTGC GGAACAACCCGGAAAGCCGTTTCTTCTCCAAGAAAGGCTTGATTTTAGGTGGCAGCCATAGCCCTTCTCCGCTAAACTCC GAGGCTCATCAAGGCGACTTATCCGCCGTATTACTTCAAAATCTCAATCCGCTCGTCAATTTAATACGCGTCCCCAAGAA ACCCATTATCCTAATGGATGAATGGGAAAGCAAGATCAAGGCGATCGTGGAGAACACTTGGAATAAGGATGTAAACAGCC TATCCGGTGTTCCTTCTTGGATGTTGGTCTTGATCAAGGCCGTATTGAAAAAAACGGGTAGGGAATATCTTACGGACGTA TGGCCTAATCTGGAGGTCTTCTTCCATGGGGGAATCAGTTTCGAGCCTTACCGGGAGCAATATAAAACCTTGATTCCATC GAATAAGATGCATTATATGGAGACCTATAACGCATCCGAGGGCTTCTTCGGGCTGCAAGACGATCCGACAGACCCCAGTT TGCTTATGATGCCGGATTACGGTATTTTCTATGAGTTCATCCCGATGAACGAGGTGGGTAACGCCCATCCGACCGTGTTG CCGCTGGAATCGGTAGAGACCGGGAAAAACTATGCGATGGTAATCACGACCTCGGGAGGATTATGGCGTTATCAGATCGG GGATACGGTACGTTTCACCTCGTTATTCCCTCATAAATTTGTCATCTCCGGACGCACCAAGCACTTTATCAACGCCTTTG GCGAGGAGCTAATGGTGGATAACGCCGATAAAGCGATCGCCATGACTTGCCTACGAACCGGGGCGAAAGTAAAAGAATAT ACCGCCGCCCCACTCTTTATGCTGGATAAGGCGAAAGGACGGCACCAATGGTTTATCGAGTTTGACAAGAAACCGGAATC TCTCGATGAATTCGCCACTTTATTAGATCAGAACTTACAAAAGCTGAACTCGGACTATGAGGCGAAGCGGTATAAAGAGA TCTCCCTCCAACCGCTGGAAATCGTTATCGCCCACGACGGCGCTTTCTATGAATGGCTCAAGCAGAAAGGCAAATTAGGC GGCCAACACAAGATCCCACGCCTCAGCAACGACCGCACGCATATAGAGGAGCTTTTGCGCATCAACCAGTCTCTATAA
Upstream 100 bases:
>100_bases GAGAGAATCCCTATTTTCATCGTAACGTTAATTTAGTACTTAGCAAAGATATAAATAAAAAGAGAATGCCTACATTTGCA CTCGAACAAATAAAAAGGGC
Downstream 100 bases:
>100_bases GCCGACATGCGCTTGATCCATAAGACGCATTAAAATTGATAAGTCAGATAGAATCCCGCCATATTCGAACTGAATACCGG AGCGGCCACGATCGGGCAGT
Product: putative auxin-regulated protein
Products: NA
Alternate protein names: Auxin-Regulated Protein; GH3 Auxin-Responsive Promoter Family Protein; Gh3 Auxin-Responsive Promoter; Plant Auxin-Regulated Protein; Gh3 AuxiN-Responsive Promoter; GH3 Auxin-Responsive Promoter Superfamily Protein; Auxin-Regulated Like; GH3 Family Protein
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MDILTQTISLLFRHRQTEIGRFGQDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSDFCQRLPLQTYDEIKPYVTRM INGERNILWPSVVRWYAKSSGTTNDKSKFLPVTPEILKGCHYKGGFDCVAIYLRNNPESRFFSKKGLILGGSHSPSPLNS EAHQGDLSAVLLQNLNPLVNLIRVPKKPIILMDEWESKIKAIVENTWNKDVNSLSGVPSWMLVLIKAVLKKTGREYLTDV WPNLEVFFHGGISFEPYREQYKTLIPSNKMHYMETYNASEGFFGLQDDPTDPSLLMMPDYGIFYEFIPMNEVGNAHPTVL PLESVETGKNYAMVITTSGGLWRYQIGDTVRFTSLFPHKFVISGRTKHFINAFGEELMVDNADKAIAMTCLRTGAKVKEY TAAPLFMLDKAKGRHQWFIEFDKKPESLDEFATLLDQNLQKLNSDYEAKRYKEISLQPLEIVIAHDGAFYEWLKQKGKLG GQHKIPRLSNDRTHIEELLRINQSL
Sequences:
>Translated_505_residues MDILTQTISLLFRHRQTEIGRFGQDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSDFCQRLPLQTYDEIKPYVTRM INGERNILWPSVVRWYAKSSGTTNDKSKFLPVTPEILKGCHYKGGFDCVAIYLRNNPESRFFSKKGLILGGSHSPSPLNS EAHQGDLSAVLLQNLNPLVNLIRVPKKPIILMDEWESKIKAIVENTWNKDVNSLSGVPSWMLVLIKAVLKKTGREYLTDV WPNLEVFFHGGISFEPYREQYKTLIPSNKMHYMETYNASEGFFGLQDDPTDPSLLMMPDYGIFYEFIPMNEVGNAHPTVL PLESVETGKNYAMVITTSGGLWRYQIGDTVRFTSLFPHKFVISGRTKHFINAFGEELMVDNADKAIAMTCLRTGAKVKEY TAAPLFMLDKAKGRHQWFIEFDKKPESLDEFATLLDQNLQKLNSDYEAKRYKEISLQPLEIVIAHDGAFYEWLKQKGKLG GQHKIPRLSNDRTHIEELLRINQSL >Mature_505_residues MDILTQTISLLFRHRQTEIGRFGQDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSDFCQRLPLQTYDEIKPYVTRM INGERNILWPSVVRWYAKSSGTTNDKSKFLPVTPEILKGCHYKGGFDCVAIYLRNNPESRFFSKKGLILGGSHSPSPLNS EAHQGDLSAVLLQNLNPLVNLIRVPKKPIILMDEWESKIKAIVENTWNKDVNSLSGVPSWMLVLIKAVLKKTGREYLTDV WPNLEVFFHGGISFEPYREQYKTLIPSNKMHYMETYNASEGFFGLQDDPTDPSLLMMPDYGIFYEFIPMNEVGNAHPTVL PLESVETGKNYAMVITTSGGLWRYQIGDTVRFTSLFPHKFVISGRTKHFINAFGEELMVDNADKAIAMTCLRTGAKVKEY TAAPLFMLDKAKGRHQWFIEFDKKPESLDEFATLLDQNLQKLNSDYEAKRYKEISLQPLEIVIAHDGAFYEWLKQKGKLG GQHKIPRLSNDRTHIEELLRINQSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58086; Mature: 58086
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILTQTISLLFRHRQTEIGRFGQDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSD CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH FCQRLPLQTYDEIKPYVTRMINGERNILWPSVVRWYAKSSGTTNDKSKFLPVTPEILKGC HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC HYKGGFDCVAIYLRNNPESRFFSKKGLILGGSHSPSPLNSEAHQGDLSAVLLQNLNPLVN CCCCCCEEEEEEEECCCHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHH LIRVPKKPIILMDEWESKIKAIVENTWNKDVNSLSGVPSWMLVLIKAVLKKTGREYLTDV HHHCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH WPNLEVFFHGGISFEPYREQYKTLIPSNKMHYMETYNASEGFFGLQDDPTDPSLLMMPDY CCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCC GIFYEFIPMNEVGNAHPTVLPLESVETGKNYAMVITTSGGLWRYQIGDTVRFTSLFPHKF CCEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEECCCEE VISGRTKHFINAFGEELMVDNADKAIAMTCLRTGAKVKEYTAAPLFMLDKAKGRHQWFIE EECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCEEEEEE FDKKPESLDEFATLLDQNLQKLNSDYEAKRYKEISLQPLEIVIAHDGAFYEWLKQKGKLG ECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCC GQHKIPRLSNDRTHIEELLRINQSL CCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDILTQTISLLFRHRQTEIGRFGQDIDHIQRKQLHALLSTARKTEWGLKYDYKSIRSYSD CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH FCQRLPLQTYDEIKPYVTRMINGERNILWPSVVRWYAKSSGTTNDKSKFLPVTPEILKGC HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC HYKGGFDCVAIYLRNNPESRFFSKKGLILGGSHSPSPLNSEAHQGDLSAVLLQNLNPLVN CCCCCCEEEEEEEECCCHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHH LIRVPKKPIILMDEWESKIKAIVENTWNKDVNSLSGVPSWMLVLIKAVLKKTGREYLTDV HHHCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH WPNLEVFFHGGISFEPYREQYKTLIPSNKMHYMETYNASEGFFGLQDDPTDPSLLMMPDY CCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCC GIFYEFIPMNEVGNAHPTVLPLESVETGKNYAMVITTSGGLWRYQIGDTVRFTSLFPHKF CCEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEECCCEE VISGRTKHFINAFGEELMVDNADKAIAMTCLRTGAKVKEYTAAPLFMLDKAKGRHQWFIE EECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCEEEEEE FDKKPESLDEFATLLDQNLQKLNSDYEAKRYKEISLQPLEIVIAHDGAFYEWLKQKGKLG ECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCC GQHKIPRLSNDRTHIEELLRINQSL CCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA