| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009389
Identifier: 150009389
GI number: 150009389
Start: 3336631
End: 3337470
Strand: Reverse
Name: 150009389
Synonym: BDI_2797
Alternate gene names: NA
Gene position: 3337470-3336631 (Counterclockwise)
Preceding gene: 150009390
Following gene: 150009388
Centisome position: 69.37
GC content: 59.05
Gene sequence:
>840_bases ATGGGTACATTCACATTGATTCCTCCGATGTCGTTAGGTAACTTGAACAAGGCCGAGAAGCTAAGTCTGTTGAAACGCTA TATGAAACTGATGCCGAGCGGCTCCGATTCCGAATCGCCGGACGAGATCTCGTTGCTAGCCGATAGCGGAGTGCCCGCGC TTAACATTTCCGCCGGACAGGTGATGCGTATGAACGGCATTATCGATGAGCTGACCGAACTGACGATGCAAGCCTCCTCC TCGGAGGAAACCCCGGAAATGCAGCAAGTGGAGGCCGATCGGGATACGGCGGGTAACTACATAGTCCGCCGCGTGCTCGA TTACGCCAAGTTGCCCCTTGCCGCCGAGCGTACCGCCGCCCAACGGATGGAACCCGCCTTGCGCGGTTACCGCGACTTCG CCAACCTGCCCACAGCGCAGGAGACGGAGGTGATCAATGGCCTGCTTATCGACCTAGCGAAGCCCGAGTTCGCCGACTCG GTAGTCACTCTGCAACTGGCACCTTACATCGCCGAGCTACGACGGCTCAACGATCGCTATGCCGAGCTGGCCGCCCTACG CGACAAATCGAGATCGGTACGCACAGAGAATGTGACCTCCAAGGAGCTGTCCTCCGAGGCGCAAGACCTGCTGGACGATA TGTGCGCACTGGCCAATGCCTCCAGCCTGTTGCAACCCTCGGAAGAGGCGCGCGTATTTGTTCGTGACGCGACTCATCTT TTCGCCCAGGTACGAACCGCCTACAAGCAACGTTCCAAGGGCACGCCCTCTGGACCCGCCGAACCCGGCACGCTGGAGCC CGGTGGGGGAGGGGATTCCGAATCTCCCGATGAAATATGA
Upstream 100 bases:
>100_bases GGCTCTCGACTCCTCAAAATCTATTTTTGGAAACCGAAATGGGCTTTTCGACCCCTCGAACGGGTACAAACGAATAATAA CCTTCAAAAAAAATCGAATT
Downstream 100 bases:
>100_bases CTAGAATAGGAAAAATGAGAATAAATAAACTAATCTGTCTGGCCCTCCTCTGCGCCCTTTGCGTAGGGGAGACTTGGGCC CAACGTGGCAAGAGAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MGTFTLIPPMSLGNLNKAEKLSLLKRYMKLMPSGSDSESPDEISLLADSGVPALNISAGQVMRMNGIIDELTELTMQASS SEETPEMQQVEADRDTAGNYIVRRVLDYAKLPLAAERTAAQRMEPALRGYRDFANLPTAQETEVINGLLIDLAKPEFADS VVTLQLAPYIAELRRLNDRYAELAALRDKSRSVRTENVTSKELSSEAQDLLDDMCALANASSLLQPSEEARVFVRDATHL FAQVRTAYKQRSKGTPSGPAEPGTLEPGGGGDSESPDEI
Sequences:
>Translated_279_residues MGTFTLIPPMSLGNLNKAEKLSLLKRYMKLMPSGSDSESPDEISLLADSGVPALNISAGQVMRMNGIIDELTELTMQASS SEETPEMQQVEADRDTAGNYIVRRVLDYAKLPLAAERTAAQRMEPALRGYRDFANLPTAQETEVINGLLIDLAKPEFADS VVTLQLAPYIAELRRLNDRYAELAALRDKSRSVRTENVTSKELSSEAQDLLDDMCALANASSLLQPSEEARVFVRDATHL FAQVRTAYKQRSKGTPSGPAEPGTLEPGGGGDSESPDEI >Mature_278_residues GTFTLIPPMSLGNLNKAEKLSLLKRYMKLMPSGSDSESPDEISLLADSGVPALNISAGQVMRMNGIIDELTELTMQASSS EETPEMQQVEADRDTAGNYIVRRVLDYAKLPLAAERTAAQRMEPALRGYRDFANLPTAQETEVINGLLIDLAKPEFADSV VTLQLAPYIAELRRLNDRYAELAALRDKSRSVRTENVTSKELSSEAQDLLDDMCALANASSLLQPSEEARVFVRDATHLF AQVRTAYKQRSKGTPSGPAEPGTLEPGGGGDSESPDEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30378; Mature: 30246
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTFTLIPPMSLGNLNKAEKLSLLKRYMKLMPSGSDSESPDEISLLADSGVPALNISAGQ CCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEECCCCC VMRMNGIIDELTELTMQASSSEETPEMQQVEADRDTAGNYIVRRVLDYAKLPLAAERTAA CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHH QRMEPALRGYRDFANLPTAQETEVINGLLIDLAKPEFADSVVTLQLAPYIAELRRLNDRY HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AELAALRDKSRSVRTENVTSKELSSEAQDLLDDMCALANASSLLQPSEEARVFVRDATHL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FAQVRTAYKQRSKGTPSGPAEPGTLEPGGGGDSESPDEI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTFTLIPPMSLGNLNKAEKLSLLKRYMKLMPSGSDSESPDEISLLADSGVPALNISAGQ CCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEECCCCC VMRMNGIIDELTELTMQASSSEETPEMQQVEADRDTAGNYIVRRVLDYAKLPLAAERTAA CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHH QRMEPALRGYRDFANLPTAQETEVINGLLIDLAKPEFADSVVTLQLAPYIAELRRLNDRY HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AELAALRDKSRSVRTENVTSKELSSEAQDLLDDMCALANASSLLQPSEEARVFVRDATHL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FAQVRTAYKQRSKGTPSGPAEPGTLEPGGGGDSESPDEI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA