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The map label for this gene is wcaC [C]

Identifier: 150009372

GI number: 150009372

Start: 3316942

End: 3318213

Strand: Reverse

Name: wcaC [C]

Synonym: BDI_2780

Alternate gene names: 150009372

Gene position: 3318213-3316942 (Counterclockwise)

Preceding gene: 150009373

Following gene: 150009371

Centisome position: 68.97

GC content: 39.78

Gene sequence:

>1272_bases
ATGAATGTAGTGATATTAAATACAGCAGAATTAACAGGCGGTGCTGCAGTTGCTGCGAATCGTTTGATGAAGGCTTTGAA
TAGGTCTGGTGCGAATGTGTCAATGCTTGTGCGGGATCAAAAAAGCAGAGATCCAAGAGTTGTTTCGATCAATAATTCTA
ACTTGAGGGAGAAGTTTAACTTTATGCGTTTTGTATGGGAACGTTTAGTGATTTTTCTCTCTAATCATTTACGGCGGAAA
CCTTTGTTCCAGGTTTCTATTGCGAATACGGGAACAGATCTCAGCTCCCATCCATTAGTCCAAAATGCGGATGTTATTCA
TTTGCATTGGATTAATCAAGGATTTCTATCTTTAGATGATATAAAAAAGTTGATACGGATTGGTAAGCCTGTAGTCTGGA
CTATGCACGATATGTGGCCATGTACGGCGATTTGCCATTATTCGTTCGGTTGCGAGAGGTTCAAGAAAGAATGTGGAAAA
TGTCCTTTCCTAAGTTCGAGCGATAAAAAGGATTTGTCGTATCATGTTTTTAATAAGAAACGTTTCTTAGCGGATTCTAA
GATACAACTGGTGGCGGTAAGTACTTGGTTAAGACAACAAGCTCAAGATAGTGCGTTGACCAATAGGTTGCCTGTAGAGG
TGATTCCGAATGTGATTGACACGAGTCTGTTTGTACTTTCTGATAAGGCGGAGGCTAGGAAGAGCTTATCTTTACCTTTG
GATAAGAAAATCATCTTGATGGGAGCCGCACGTATCAATGATCCGATTAAAGGTTTTGAATATCTTGTCAAGGCTTTATC
TATATTGAAAGAGAGGAAAGGAGAGGAAGATTATTTCTTGGTTTTGTTTGGAGGTATCAAAGGGGATGATTCTTTTTTGT
CGGAAATTCCGATTTCTTATGTATGGATGGGATCTTTGAGTGATCCTTCTATGATCGCGAAATTATATGCCGCAGCTGAC
GTAACGGTGGTAGCTTCTTTGTATGAGACTTTTGGCCAGACTATTATAGAAGGGATGGCTTGTGGTTGTCCGGCGGTGAG
TTTTGATAATAGCGGACAGACTGATATTATAAACCACTTGGAAAATGGATACCTGGCGAAATATAAGGATACGGATGACT
TGGCTACGGGTATCAAGTGGGTAATCGATAATCGAGAGTCTTTGCGATTAGATGAGGCTTGTATCCGCAAGGTACATGAT
TGTTATAAGGAATCGATTATTGCCAAAAAATATATAGCTTTGTATCAGAGTCTGTGTAATAAGCGTGAATAG

Upstream 100 bases:

>100_bases
GAGTGTCAGTGATAATTCCGTTTGATTTGCGAATTAACCGGTGGATAAGTGAATGGATTGAAACTAAGAAAAATAGTTGC
AGGAAAATAATAGATAAGCG

Downstream 100 bases:

>100_bases
AATGAAAGAAGACCAGCATATCGAATTTAAGGAATCATGGCATGACGAATATACTCGTTATGTCTCTGCTTTTTGTAATA
CGCAGGGAGGCGTGTTGTAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MNVVILNTAELTGGAAVAANRLMKALNRSGANVSMLVRDQKSRDPRVVSINNSNLREKFNFMRFVWERLVIFLSNHLRRK
PLFQVSIANTGTDLSSHPLVQNADVIHLHWINQGFLSLDDIKKLIRIGKPVVWTMHDMWPCTAICHYSFGCERFKKECGK
CPFLSSSDKKDLSYHVFNKKRFLADSKIQLVAVSTWLRQQAQDSALTNRLPVEVIPNVIDTSLFVLSDKAEARKSLSLPL
DKKIILMGAARINDPIKGFEYLVKALSILKERKGEEDYFLVLFGGIKGDDSFLSEIPISYVWMGSLSDPSMIAKLYAAAD
VTVVASLYETFGQTIIEGMACGCPAVSFDNSGQTDIINHLENGYLAKYKDTDDLATGIKWVIDNRESLRLDEACIRKVHD
CYKESIIAKKYIALYQSLCNKRE

Sequences:

>Translated_423_residues
MNVVILNTAELTGGAAVAANRLMKALNRSGANVSMLVRDQKSRDPRVVSINNSNLREKFNFMRFVWERLVIFLSNHLRRK
PLFQVSIANTGTDLSSHPLVQNADVIHLHWINQGFLSLDDIKKLIRIGKPVVWTMHDMWPCTAICHYSFGCERFKKECGK
CPFLSSSDKKDLSYHVFNKKRFLADSKIQLVAVSTWLRQQAQDSALTNRLPVEVIPNVIDTSLFVLSDKAEARKSLSLPL
DKKIILMGAARINDPIKGFEYLVKALSILKERKGEEDYFLVLFGGIKGDDSFLSEIPISYVWMGSLSDPSMIAKLYAAAD
VTVVASLYETFGQTIIEGMACGCPAVSFDNSGQTDIINHLENGYLAKYKDTDDLATGIKWVIDNRESLRLDEACIRKVHD
CYKESIIAKKYIALYQSLCNKRE
>Mature_423_residues
MNVVILNTAELTGGAAVAANRLMKALNRSGANVSMLVRDQKSRDPRVVSINNSNLREKFNFMRFVWERLVIFLSNHLRRK
PLFQVSIANTGTDLSSHPLVQNADVIHLHWINQGFLSLDDIKKLIRIGKPVVWTMHDMWPCTAICHYSFGCERFKKECGK
CPFLSSSDKKDLSYHVFNKKRFLADSKIQLVAVSTWLRQQAQDSALTNRLPVEVIPNVIDTSLFVLSDKAEARKSLSLPL
DKKIILMGAARINDPIKGFEYLVKALSILKERKGEEDYFLVLFGGIKGDDSFLSEIPISYVWMGSLSDPSMIAKLYAAAD
VTVVASLYETFGQTIIEGMACGCPAVSFDNSGQTDIINHLENGYLAKYKDTDDLATGIKWVIDNRESLRLDEACIRKVHD
CYKESIIAKKYIALYQSLCNKRE

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 47684; Mature: 47684

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVILNTAELTGGAAVAANRLMKALNRSGANVSMLVRDQKSRDPRVVSINNSNLREKFN
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHH
FMRFVWERLVIFLSNHLRRKPLFQVSIANTGTDLSSHPLVQNADVIHLHWINQGFLSLDD
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHH
IKKLIRIGKPVVWTMHDMWPCTAICHYSFGCERFKKECGKCPFLSSSDKKDLSYHVFNKK
HHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCH
RFLADSKIQLVAVSTWLRQQAQDSALTNRLPVEVIPNVIDTSLFVLSDKAEARKSLSLPL
HHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHCHHHCCEEEEEECHHHHHHHCCCCC
DKKIILMGAARINDPIKGFEYLVKALSILKERKGEEDYFLVLFGGIKGDDSFLSEIPISY
CCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCEEE
VWMGSLSDPSMIAKLYAAADVTVVASLYETFGQTIIEGMACGCPAVSFDNSGQTDIINHL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
ENGYLAKYKDTDDLATGIKWVIDNRESLRLDEACIRKVHDCYKESIIAKKYIALYQSLCN
CCCCEEEECCCHHHHHCHHEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KRE
CCC
>Mature Secondary Structure
MNVVILNTAELTGGAAVAANRLMKALNRSGANVSMLVRDQKSRDPRVVSINNSNLREKFN
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHH
FMRFVWERLVIFLSNHLRRKPLFQVSIANTGTDLSSHPLVQNADVIHLHWINQGFLSLDD
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHH
IKKLIRIGKPVVWTMHDMWPCTAICHYSFGCERFKKECGKCPFLSSSDKKDLSYHVFNKK
HHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCH
RFLADSKIQLVAVSTWLRQQAQDSALTNRLPVEVIPNVIDTSLFVLSDKAEARKSLSLPL
HHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHCHHHCCEEEEEECHHHHHHHCCCCC
DKKIILMGAARINDPIKGFEYLVKALSILKERKGEEDYFLVLFGGIKGDDSFLSEIPISY
CCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCEEE
VWMGSLSDPSMIAKLYAAADVTVVASLYETFGQTIIEGMACGCPAVSFDNSGQTDIINHL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
ENGYLAKYKDTDDLATGIKWVIDNRESLRLDEACIRKVHDCYKESIIAKKYIALYQSLCN
CCCCEEEECCCHHHHHCHHEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KRE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]