Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150009332

Identifier: 150009332

GI number: 150009332

Start: 3255899

End: 3257959

Strand: Direct

Name: 150009332

Synonym: BDI_2739

Alternate gene names: NA

Gene position: 3255899-3257959 (Clockwise)

Preceding gene: 150009331

Following gene: 150009342

Centisome position: 67.67

GC content: 48.18

Gene sequence:

>2061_bases
ATGAAGCACTTGAGTTCCTCTATTTTATTGGGGCTTGGCTTGTTTTCCTTCTTCTCCTGTAAAGAAGCGACAGCGCCCGC
CCCTATCCTGCCCGTTCCCACGCCGGCACAAGTTGAATGGCATAAGATGGAAACATATGCCTTTGTCCATTTCGGATTAA
ATACGTTCAATGATCTGGAATGGGGTTACGGAAACACTCCCGCCTCCACATTCAATCCAACGGATCTGGATTGCGATCAA
TGGGCGCAAACAATCAAAGCCGCCGGATTGAAAGGCGTAATCTTAACTACCAAGCATCATGACGGTTTCTGTCTATGGCC
TACCGCCACAACCGAATATAGCGTAAAGAATTCTCCTTGGAAAGATGGCAAAGGGGATATGGTAAAAGAACTATCCGACG
CTTGTAAGAAACACGGGCTGAAATTCGGTGTCTATCTCTCCCCTTGGGACAGAAACAGTGAGAATTACGGACAACCGGGA
TATGTAGAGAAATTCCATGCCCAATTACATGAATTAGTCTCCAACTATGGCCCGTTGTTCGAATACTGGTTTGATGGGGC
AAACGGTGGCAATGGCTGGTATGGCGGCACGAATGAAACCCGTGCTATAGACGCCAAGACCTATTATCAATATGAGCGGG
CATGCGACACGATCAAGGCGCACCACCCGGACATCATGGTTTTCGGAGGGACAGTACCCGATATCCGCTGGATCGGTAAC
GAGGAAGGTTGGGCCGGTGATACCCAATGGAGCATCTTCGCCCCGGAACCCTCCATGCCTACTTTCCAACAGAGTGTATG
GGGAGATGAGAACGGACCGATGTGGCTAGGTGGAGAATGCGATGTATCTATCCGTCCGGGATGGTTCTATCACTCCCGGG
AAGATCACCAAGTCAAGTCGCTGGCAAAATTAGTCGATCTTTATTACCGAAGCGTCGGGCATAACGCCAATTTCCTATTG
AACTTCCCCGTAGCGTTGAACGGAAAAATAAGTCCGGTAGACTCCGCCCGTGCCGTACAATGGTATCAAACCATCCAAAA
TGACTTTAAGGAGAATCTTTTGAAAGGATGTTACGTACAAGCGAGCAATAAAAGAGGACGTAATTTTAGTCCCAATAAGG
CAGTAGATGGGGATTGGGATACCTATTGGGCTACGGACGATGGCGTAACCAGTGGTTCATTGACTTTCACGTTAACCCAT
CCTACCGATGTAAACCGCTTGGTCATACAAGAATATATCCCATTAGGACAACGAGTACGCTCGTTCAATATCGAACTCGA
GCAAGAGGGTAAATGGATTCCGGCACAGACCGTGGATTCTACGACAACTGTCGGCTATAAACGAATTGTCCGTTTCCAGA
CCGAGAAAGCGGAGAAGATACGCATCAACTTCACGGATGCCCGCGGACCGCTTTGTATCAATAACGTGGAGGCATACCTT
GCCCCCGCCTTGGTGACCGAGCCAACGATTGCCCGTAATATCAATGACGAGGTAACCATACAGGCCGGGGATAAAGGCTC
CGAGGTTCATTATACCACCGACGGCTCAGATCCGACCAAGGACTCACCGCTTTATCAGGCGCCATTCGCTTTCGCTCAAA
AAGGAACTGTCAAGGCGATTGCCTATGATCCGACTTTCGATACAGTCAGTCCGGTTTCCGCGCAAACGTTCGATATTCCA
GCTTGTGATTACACGATCGTATCACCGAAAGATGAGAAAACCAGCCTGATCCTAGACGGAAACGGCTACACGACCTACTA
TTTGCCACAAGGGAAACAAGAGTTAGTCGTACAATTAGCGAAAGAAATGCCTATATCCGGATTCCGCTACACCCCGAACC
AAGGACGTGACGCAAGCGGTCATATCTCCAACTATCAATTATATATTAATGGAAAGAAGGTGGCCGAAGGCGAATTCTCC
AATATCAAGGCTAACCCGATCGAGCAAGTCGTACATTTCCCAATAACGAAAGGTAACCAAATCCGTTTGGTCGCAACCCG
TATCGTAGATAATAAAAAGCAAGCGGGTATCGGTGAATTCTCGGTAATTACGGAAAAATAA

Upstream 100 bases:

>100_bases
AGACAGGAGACTTTATCTTTTATCTAGATATCTAAAGACAGAATAAAAATCTGCCGTTTTTTTTCATATATTTGAGGTCT
CATCTAAATATAAACAAATA

Downstream 100 bases:

>100_bases
AGAATATCTAATAAAAGCAGAAGGGACCGCCTCGAAAACCTAATTTCCCGAGGCGGTCCCTTTTTATTTATTCATCGATC
CTTTATTTATCCTTGAAGGT

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Coagulation Factor 5/8 Type Domain Protein; Calx-Beta Domain-Containing Protein; Alpha-1 3/4-Fucosidase; Glycosyl Hydrolase; Exported Alpha-L-Fucosidase Protein; Lipoprotein; Alpha-L-Fucosidase Protein; Exporte Hydrolase; Alpha-L-Fucosidase Family Protein; Exported Fucosidase; Coagulation Factor 5/8 Type Domain-Containing Protein; Alpha-L-Fucosidase-Like Protein; Glycoside Hydrolase Family Alpha-L-Fucosidase; Glycosyl Hydrolase Alpha-L-Fucosidase; Exported Hydrolase; Ig Domain-Containing; Twin-Arginine Translocation Pathway Signal; Fucosidase; F5/8 Type C Domain-Containing Protein; DS Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Glycoside Hydrolase

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MKHLSSSILLGLGLFSFFSCKEATAPAPILPVPTPAQVEWHKMETYAFVHFGLNTFNDLEWGYGNTPASTFNPTDLDCDQ
WAQTIKAAGLKGVILTTKHHDGFCLWPTATTEYSVKNSPWKDGKGDMVKELSDACKKHGLKFGVYLSPWDRNSENYGQPG
YVEKFHAQLHELVSNYGPLFEYWFDGANGGNGWYGGTNETRAIDAKTYYQYERACDTIKAHHPDIMVFGGTVPDIRWIGN
EEGWAGDTQWSIFAPEPSMPTFQQSVWGDENGPMWLGGECDVSIRPGWFYHSREDHQVKSLAKLVDLYYRSVGHNANFLL
NFPVALNGKISPVDSARAVQWYQTIQNDFKENLLKGCYVQASNKRGRNFSPNKAVDGDWDTYWATDDGVTSGSLTFTLTH
PTDVNRLVIQEYIPLGQRVRSFNIELEQEGKWIPAQTVDSTTTVGYKRIVRFQTEKAEKIRINFTDARGPLCINNVEAYL
APALVTEPTIARNINDEVTIQAGDKGSEVHYTTDGSDPTKDSPLYQAPFAFAQKGTVKAIAYDPTFDTVSPVSAQTFDIP
ACDYTIVSPKDEKTSLILDGNGYTTYYLPQGKQELVVQLAKEMPISGFRYTPNQGRDASGHISNYQLYINGKKVAEGEFS
NIKANPIEQVVHFPITKGNQIRLVATRIVDNKKQAGIGEFSVITEK

Sequences:

>Translated_686_residues
MKHLSSSILLGLGLFSFFSCKEATAPAPILPVPTPAQVEWHKMETYAFVHFGLNTFNDLEWGYGNTPASTFNPTDLDCDQ
WAQTIKAAGLKGVILTTKHHDGFCLWPTATTEYSVKNSPWKDGKGDMVKELSDACKKHGLKFGVYLSPWDRNSENYGQPG
YVEKFHAQLHELVSNYGPLFEYWFDGANGGNGWYGGTNETRAIDAKTYYQYERACDTIKAHHPDIMVFGGTVPDIRWIGN
EEGWAGDTQWSIFAPEPSMPTFQQSVWGDENGPMWLGGECDVSIRPGWFYHSREDHQVKSLAKLVDLYYRSVGHNANFLL
NFPVALNGKISPVDSARAVQWYQTIQNDFKENLLKGCYVQASNKRGRNFSPNKAVDGDWDTYWATDDGVTSGSLTFTLTH
PTDVNRLVIQEYIPLGQRVRSFNIELEQEGKWIPAQTVDSTTTVGYKRIVRFQTEKAEKIRINFTDARGPLCINNVEAYL
APALVTEPTIARNINDEVTIQAGDKGSEVHYTTDGSDPTKDSPLYQAPFAFAQKGTVKAIAYDPTFDTVSPVSAQTFDIP
ACDYTIVSPKDEKTSLILDGNGYTTYYLPQGKQELVVQLAKEMPISGFRYTPNQGRDASGHISNYQLYINGKKVAEGEFS
NIKANPIEQVVHFPITKGNQIRLVATRIVDNKKQAGIGEFSVITEK
>Mature_686_residues
MKHLSSSILLGLGLFSFFSCKEATAPAPILPVPTPAQVEWHKMETYAFVHFGLNTFNDLEWGYGNTPASTFNPTDLDCDQ
WAQTIKAAGLKGVILTTKHHDGFCLWPTATTEYSVKNSPWKDGKGDMVKELSDACKKHGLKFGVYLSPWDRNSENYGQPG
YVEKFHAQLHELVSNYGPLFEYWFDGANGGNGWYGGTNETRAIDAKTYYQYERACDTIKAHHPDIMVFGGTVPDIRWIGN
EEGWAGDTQWSIFAPEPSMPTFQQSVWGDENGPMWLGGECDVSIRPGWFYHSREDHQVKSLAKLVDLYYRSVGHNANFLL
NFPVALNGKISPVDSARAVQWYQTIQNDFKENLLKGCYVQASNKRGRNFSPNKAVDGDWDTYWATDDGVTSGSLTFTLTH
PTDVNRLVIQEYIPLGQRVRSFNIELEQEGKWIPAQTVDSTTTVGYKRIVRFQTEKAEKIRINFTDARGPLCINNVEAYL
APALVTEPTIARNINDEVTIQAGDKGSEVHYTTDGSDPTKDSPLYQAPFAFAQKGTVKAIAYDPTFDTVSPVSAQTFDIP
ACDYTIVSPKDEKTSLILDGNGYTTYYLPQGKQELVVQLAKEMPISGFRYTPNQGRDASGHISNYQLYINGKKVAEGEFS
NIKANPIEQVVHFPITKGNQIRLVATRIVDNKKQAGIGEFSVITEK

Specific function: Unknown

COG id: COG3669

COG function: function code G; Alpha-L-fucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76670; Mature: 76670

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLSSSILLGLGLFSFFSCKEATAPAPILPVPTPAQVEWHKMETYAFVHFGLNTFNDLE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCC
WGYGNTPASTFNPTDLDCDQWAQTIKAAGLKGVILTTKHHDGFCLWPTATTEYSVKNSPW
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCCEEEECCCCC
KDGKGDMVKELSDACKKHGLKFGVYLSPWDRNSENYGQPGYVEKFHAQLHELVSNYGPLF
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE
EYWFDGANGGNGWYGGTNETRAIDAKTYYQYERACDTIKAHHPDIMVFGGTVPDIRWIGN
EHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECC
EEGWAGDTQWSIFAPEPSMPTFQQSVWGDENGPMWLGGECDVSIRPGWFYHSREDHQVKS
CCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCEEECCEEEEEECCCEEECCCCCHHHHH
LAKLVDLYYRSVGHNANFLLNFPVALNGKISPVDSARAVQWYQTIQNDFKENLLKGCYVQ
HHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEE
ASNKRGRNFSPNKAVDGDWDTYWATDDGVTSGSLTFTLTHPTDVNRLVIQEYIPLGQRVR
ECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHEE
SFNIELEQEGKWIPAQTVDSTTTVGYKRIVRFQTEKAEKIRINFTDARGPLCINNVEAYL
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHEEECCCCEEEEEEEECCCCCEEECCCHHHH
APALVTEPTIARNINDEVTIQAGDKGSEVHYTTDGSDPTKDSPLYQAPFAFAQKGTVKAI
CCHHHCCCHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEECCHHHHCCCCEEEE
AYDPTFDTVSPVSAQTFDIPACDYTIVSPKDEKTSLILDGNGYTTYYLPQGKQELVVQLA
EECCCCCCCCCCCCCEEECCCCCEEEECCCCCCEEEEECCCCEEEEECCCCHHHHHHHHH
KEMPISGFRYTPNQGRDASGHISNYQLYINGKKVAEGEFSNIKANPIEQVVHFPITKGNQ
HHCCCCCEEECCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCHHHHHHCCCCCCCCE
IRLVATRIVDNKKQAGIGEFSVITEK
EEEEEEEECCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKHLSSSILLGLGLFSFFSCKEATAPAPILPVPTPAQVEWHKMETYAFVHFGLNTFNDLE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCC
WGYGNTPASTFNPTDLDCDQWAQTIKAAGLKGVILTTKHHDGFCLWPTATTEYSVKNSPW
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCCEEEECCCCC
KDGKGDMVKELSDACKKHGLKFGVYLSPWDRNSENYGQPGYVEKFHAQLHELVSNYGPLF
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE
EYWFDGANGGNGWYGGTNETRAIDAKTYYQYERACDTIKAHHPDIMVFGGTVPDIRWIGN
EHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECC
EEGWAGDTQWSIFAPEPSMPTFQQSVWGDENGPMWLGGECDVSIRPGWFYHSREDHQVKS
CCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCEEECCEEEEEECCCEEECCCCCHHHHH
LAKLVDLYYRSVGHNANFLLNFPVALNGKISPVDSARAVQWYQTIQNDFKENLLKGCYVQ
HHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEE
ASNKRGRNFSPNKAVDGDWDTYWATDDGVTSGSLTFTLTHPTDVNRLVIQEYIPLGQRVR
ECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHEE
SFNIELEQEGKWIPAQTVDSTTTVGYKRIVRFQTEKAEKIRINFTDARGPLCINNVEAYL
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHEEECCCCEEEEEEEECCCCCEEECCCHHHH
APALVTEPTIARNINDEVTIQAGDKGSEVHYTTDGSDPTKDSPLYQAPFAFAQKGTVKAI
CCHHHCCCHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEECCHHHHCCCCEEEE
AYDPTFDTVSPVSAQTFDIPACDYTIVSPKDEKTSLILDGNGYTTYYLPQGKQELVVQLA
EECCCCCCCCCCCCCEEECCCCCEEEECCCCCCEEEEECCCCEEEEECCCCHHHHHHHHH
KEMPISGFRYTPNQGRDASGHISNYQLYINGKKVAEGEFSNIKANPIEQVVHFPITKGNQ
HHCCCCCEEECCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCHHHHHHCCCCCCCCE
IRLVATRIVDNKKQAGIGEFSVITEK
EEEEEEEECCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA