Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is ybjQ [C]

Identifier: 150009330

GI number: 150009330

Start: 3249031

End: 3249351

Strand: Direct

Name: ybjQ [C]

Synonym: BDI_2732

Alternate gene names: 150009330

Gene position: 3249031-3249351 (Clockwise)

Preceding gene: 150009329

Following gene: 150009331

Centisome position: 67.53

GC content: 49.22

Gene sequence:

>321_bases
ATGTTACTCACAACAACTAACACGATCGAAGGAAAAGAAATTACCCAGTACTTCGGAATCGTATCCGGTGAAACGATCAT
CGGAGCGAATGTATTCAAAGATTTCTTCGCAGGCATCCGGGATATTGTCGGAGGACGTGCAGGTTCTTACGAGAGTGTCT
TACGCGAAGCGAAAGAAACGGCCTTGAAAGAAATGAGCGATCATGCGGCACGAATGGGCGCAAACGCTGTAATCGCCGTA
GATCTAGATTATGAGACCGTAGGAGGAAGCGGAAGCATGCTGATGGTTACCGCCGCCGGGACAGCCGTACGCTACCAATA
A

Upstream 100 bases:

>100_bases
AAATAAATTCATATAAAGAAACATAAAAACAAAGGGCGAATCAGTACACTGGTTCGCCCTTTATCTTATATTTGCCCTCA
AACGATTAAATTGAAAAGCT

Downstream 100 bases:

>100_bases
TCCCCAAAATGAAATACTTTGGAGCCGGATTAAGCGAATCACATAAAGAACTAAACCGCATTATCCGTAAACCGGAATTA
ATAGAGCAAACCAAGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKETALKEMSDHAARMGANAVIAV
DLDYETVGGSGSMLMVTAAGTAVRYQ

Sequences:

>Translated_106_residues
MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKETALKEMSDHAARMGANAVIAV
DLDYETVGGSGSMLMVTAAGTAVRYQ
>Mature_106_residues
MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKETALKEMSDHAARMGANAVIAV
DLDYETVGGSGSMLMVTAAGTAVRYQ

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family

Homologues:

Organism=Escherichia coli, GI1787091, Length=104, Percent_Identity=58.6538461538462, Blast_Score=135, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2732_PARD8 (A6LFI7)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001304073.1
- ProteinModelPortal:   A6LFI7
- SMR:   A6LFI7
- STRING:   A6LFI7
- GeneID:   5307881
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_2732
- eggNOG:   COG0393
- HOGENOM:   HBG339160
- OMA:   DFEISMP
- BioCyc:   PDIS435591:BDI_2732-MONOMER
- HAMAP:   MF_00338
- InterPro:   IPR002765
- Gene3D:   G3DSA:3.30.110.70

Pfam domain/function: PF01906 DUF74

EC number: NA

Molecular weight: Translated: 11229; Mature: 11229

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKET
CEEECCCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALKEMSDHAARMGANAVIAVDLDYETVGGSGSMLMVTAAGTAVRYQ
HHHHHHHHHHHCCCCEEEEEECCCEECCCCCCEEEEEECCEEEECC
>Mature Secondary Structure
MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKET
CEEECCCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALKEMSDHAARMGANAVIAVDLDYETVGGSGSMLMVTAAGTAVRYQ
HHHHHHHHHHHCCCCEEEEEECCCEECCCCCCEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA