| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is ybjQ [C]
Identifier: 150009330
GI number: 150009330
Start: 3249031
End: 3249351
Strand: Direct
Name: ybjQ [C]
Synonym: BDI_2732
Alternate gene names: 150009330
Gene position: 3249031-3249351 (Clockwise)
Preceding gene: 150009329
Following gene: 150009331
Centisome position: 67.53
GC content: 49.22
Gene sequence:
>321_bases ATGTTACTCACAACAACTAACACGATCGAAGGAAAAGAAATTACCCAGTACTTCGGAATCGTATCCGGTGAAACGATCAT CGGAGCGAATGTATTCAAAGATTTCTTCGCAGGCATCCGGGATATTGTCGGAGGACGTGCAGGTTCTTACGAGAGTGTCT TACGCGAAGCGAAAGAAACGGCCTTGAAAGAAATGAGCGATCATGCGGCACGAATGGGCGCAAACGCTGTAATCGCCGTA GATCTAGATTATGAGACCGTAGGAGGAAGCGGAAGCATGCTGATGGTTACCGCCGCCGGGACAGCCGTACGCTACCAATA A
Upstream 100 bases:
>100_bases AAATAAATTCATATAAAGAAACATAAAAACAAAGGGCGAATCAGTACACTGGTTCGCCCTTTATCTTATATTTGCCCTCA AACGATTAAATTGAAAAGCT
Downstream 100 bases:
>100_bases TCCCCAAAATGAAATACTTTGGAGCCGGATTAAGCGAATCACATAAAGAACTAAACCGCATTATCCGTAAACCGGAATTA ATAGAGCAAACCAAGGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKETALKEMSDHAARMGANAVIAV DLDYETVGGSGSMLMVTAAGTAVRYQ
Sequences:
>Translated_106_residues MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKETALKEMSDHAARMGANAVIAV DLDYETVGGSGSMLMVTAAGTAVRYQ >Mature_106_residues MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKETALKEMSDHAARMGANAVIAV DLDYETVGGSGSMLMVTAAGTAVRYQ
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family
Homologues:
Organism=Escherichia coli, GI1787091, Length=104, Percent_Identity=58.6538461538462, Blast_Score=135, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2732_PARD8 (A6LFI7)
Other databases:
- EMBL: CP000140 - RefSeq: YP_001304073.1 - ProteinModelPortal: A6LFI7 - SMR: A6LFI7 - STRING: A6LFI7 - GeneID: 5307881 - GenomeReviews: CP000140_GR - KEGG: pdi:BDI_2732 - eggNOG: COG0393 - HOGENOM: HBG339160 - OMA: DFEISMP - BioCyc: PDIS435591:BDI_2732-MONOMER - HAMAP: MF_00338 - InterPro: IPR002765 - Gene3D: G3DSA:3.30.110.70
Pfam domain/function: PF01906 DUF74
EC number: NA
Molecular weight: Translated: 11229; Mature: 11229
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKET CEEECCCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ALKEMSDHAARMGANAVIAVDLDYETVGGSGSMLMVTAAGTAVRYQ HHHHHHHHHHHCCCCEEEEEECCCEECCCCCCEEEEEECCEEEECC >Mature Secondary Structure MLLTTTNTIEGKEITQYFGIVSGETIIGANVFKDFFAGIRDIVGGRAGSYESVLREAKET CEEECCCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ALKEMSDHAARMGANAVIAVDLDYETVGGSGSMLMVTAAGTAVRYQ HHHHHHHHHHHCCCCEEEEEECCCEECCCCCCEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA