| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009312
Identifier: 150009312
GI number: 150009312
Start: 3222397
End: 3223143
Strand: Direct
Name: 150009312
Synonym: BDI_2714
Alternate gene names: NA
Gene position: 3222397-3223143 (Clockwise)
Preceding gene: 150009311
Following gene: 150009314
Centisome position: 66.97
GC content: 35.61
Gene sequence:
>747_bases ATGGAGAATAAGGATTTTATTATTTCAAAGTTCAAAGAGGTTAAATCCTTGGAATATGTTCCAAGCAATAGAGCCAACAA TACTGGGATTGGAAAAACATTTGAAGATTACATCGGAGTTGTCGAGAACAATTTAGACGAGCCCGATTTAGCTGGATTCG AAATAAAATCTCATCGCGGCGCTTCATGCTCTTACGTTACCCTATTCACTAAAAGCCCCTCATTTCCCAAACGTGCGAAT GCTTATTTAAAAGATAAATTTGGCACACCTTATGAAGATGCACCATCTATAAATAGCTTGCATACGTCTATGTTTGCAAA TAGCTATAACACATATATGAAGAAATATTCTTTTAAACTCCTAAACAACCCTGTCGCCAAGACAATATTAATAGGAGTAT TTGACTTAAATACAAAAGAGCTGTTAGATTGTAGCGTAGGTTACACCTATCAAGACATTCAAAAAGCACTAACAAAGAAG CTAAAGAACTTATTATATGTAACTGCCCAAACGAAAAAAGAAGGAGGTAAGGAACTCTTCTACTTCAATAAAGCCGATAT ATATACAGAGCCATCATTTGAACGTTTTATATCACTCTTAACCGATGGGAAGATAATGTATGATATAAGAATCGGGAGCT ATAAATCTGGCCCCAAATATGGTATGCCGCACGACCATGGGAGTGGATTCAGAATATTAGAGGCTAATATCAGACTATTA TATTCTGATCACGAAACCATAGAATAA
Upstream 100 bases:
>100_bases CACTATTTCAACATTACCATAGAACAGCTATTCATATCAGAGGAAGATTTTTCCAAAGATAGAGATATTATTGACTTACT CATATTTAATATAATACGTT
Downstream 100 bases:
>100_bases AACAAGCTACGCTTCATTTGTTGGCATCTGTATCAAGACCGGAGACAAATACCATAGGGTTTCAACGATAATAGGCTCAA TATCCCAACCGGATATTATC
Product: putative glycosyl hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MENKDFIISKFKEVKSLEYVPSNRANNTGIGKTFEDYIGVVENNLDEPDLAGFEIKSHRGASCSYVTLFTKSPSFPKRAN AYLKDKFGTPYEDAPSINSLHTSMFANSYNTYMKKYSFKLLNNPVAKTILIGVFDLNTKELLDCSVGYTYQDIQKALTKK LKNLLYVTAQTKKEGGKELFYFNKADIYTEPSFERFISLLTDGKIMYDIRIGSYKSGPKYGMPHDHGSGFRILEANIRLL YSDHETIE
Sequences:
>Translated_248_residues MENKDFIISKFKEVKSLEYVPSNRANNTGIGKTFEDYIGVVENNLDEPDLAGFEIKSHRGASCSYVTLFTKSPSFPKRAN AYLKDKFGTPYEDAPSINSLHTSMFANSYNTYMKKYSFKLLNNPVAKTILIGVFDLNTKELLDCSVGYTYQDIQKALTKK LKNLLYVTAQTKKEGGKELFYFNKADIYTEPSFERFISLLTDGKIMYDIRIGSYKSGPKYGMPHDHGSGFRILEANIRLL YSDHETIE >Mature_248_residues MENKDFIISKFKEVKSLEYVPSNRANNTGIGKTFEDYIGVVENNLDEPDLAGFEIKSHRGASCSYVTLFTKSPSFPKRAN AYLKDKFGTPYEDAPSINSLHTSMFANSYNTYMKKYSFKLLNNPVAKTILIGVFDLNTKELLDCSVGYTYQDIQKALTKK LKNLLYVTAQTKKEGGKELFYFNKADIYTEPSFERFISLLTDGKIMYDIRIGSYKSGPKYGMPHDHGSGFRILEANIRLL YSDHETIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28262; Mature: 28262
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKDFIISKFKEVKSLEYVPSNRANNTGIGKTFEDYIGVVENNLDEPDLAGFEIKSHRG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCC ASCSYVTLFTKSPSFPKRANAYLKDKFGTPYEDAPSINSLHTSMFANSYNTYMKKYSFKL CCEEEEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LNNPVAKTILIGVFDLNTKELLDCSVGYTYQDIQKALTKKLKNLLYVTAQTKKEGGKELF HCCCHHHEEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEE YFNKADIYTEPSFERFISLLTDGKIMYDIRIGSYKSGPKYGMPHDHGSGFRILEANIRLL EEECCCCEECCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEE YSDHETIE ECCCCCCC >Mature Secondary Structure MENKDFIISKFKEVKSLEYVPSNRANNTGIGKTFEDYIGVVENNLDEPDLAGFEIKSHRG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCC ASCSYVTLFTKSPSFPKRANAYLKDKFGTPYEDAPSINSLHTSMFANSYNTYMKKYSFKL CCEEEEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LNNPVAKTILIGVFDLNTKELLDCSVGYTYQDIQKALTKKLKNLLYVTAQTKKEGGKELF HCCCHHHEEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEE YFNKADIYTEPSFERFISLLTDGKIMYDIRIGSYKSGPKYGMPHDHGSGFRILEANIRLL EEECCCCEECCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEE YSDHETIE ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA