Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150009306

Identifier: 150009306

GI number: 150009306

Start: 3216492

End: 3217883

Strand: Direct

Name: 150009306

Synonym: BDI_2708

Alternate gene names: NA

Gene position: 3216492-3217883 (Clockwise)

Preceding gene: 150009290

Following gene: 150009307

Centisome position: 66.85

GC content: 41.45

Gene sequence:

>1392_bases
ATGAAAACAAACAATTTGTATATTACGTTATTTGCGGCATTAGCTATCACTGCATGCAGTAAAGATAACGAGCTTCCTCA
AGGATCTGCTAAAGACCCGAATGCCGATATGCCGGACGCATATACCTCTATCGCTATCAATATTCCCCACACCACTATGA
CGAAAGCCGCTTCGGGCCGTGCCATTGATCAGGGAATAGCGGACGAGAACAAGGTCAAGACCTTACATGTATTTATCTAC
GATACCGATGCCCCAAATACTCCGACAGTTGCCGAATTTACGGTAGACGACAATTCTCTTGCCCCCAAATCTCCCGGTAG
CTCCACTTGGGTAACAAACAGAGCTATCAAAACTAAAAAAGCCGATAAATATATTTTTGCAGCAGTGAACCTCAATACAG
ATATGGTCAACTATATCACAGCCAATGGACTCGGATCATTCAGTTACAATCAATTTGCCCAAGAAATCTCGCAACTGGCA
GATCTGACAAATGGCTTTGTCATGTTCAACACGAGTTATCCGGAAAGTACCCCGGCTGCAAACTTATATGAAAATGAAAG
CCTTGCCCAAACGAATCGCATGGCTATACCGGTTTCCCGCGTTGTAGCGAAAGCAGCAGTATTCAAAGCTAATGACTTTG
TTGTAAACGGAGGAGGAAACATGACGGAGATAAAATTCGGTTGGAGGAACTTGAATAAAAAGTTCTATTTCATACAGGAT
AAAAGAGACGGGATTATCAAGGACTATAATTGGGAAAATTATTCCGTATCGGATTTCGAAAGAGGGTCGGACGCCATAAA
CACCTATACTTCAACGGACGATCCGGTCACTTTTTCCTACGCACCTGAGAACTCATTCAAATACAGCTTGGATCAAACAG
AAGTAAACGGAACGACTTTTATTAGTGTCAGCGGAGTGTTTACGCCAGATAAAGTAATATCGACTTCAAATCCCAGCCCA
ACCCAACCGGCAGATTTTGCGATTATCAGTAATCCCAATAATTCCGACAAAACATTCTATGTAGTCAGAACAGCCGACGG
TATTGCCAACTATTTTGTAAATGGGACTATAGCACAACAATATGCCGATCTTTGCAGTAAAAATACTCCGGGGATGCCTC
TTTACAACGGAACATACATATTGAATGAGAATACATTTACAAATGGTATCTGTTACTTCCACATTTTCGTCAATGCCAAT
GCTACGTCACCTCAAGCACCTTATAACGTTTACCGGAATCAGTATTTTAAGGTAAACATCCATAGCATACAAGCTCCGGG
AAATCCTTCAGACAATTTCGATACCGGAGAGGTGATTAAATCAGAAACATGGATAAGTACTGATATAGAAATAACTCCAT
GGGAAGTCTATGAAGAAGACTATGATCTATAG

Upstream 100 bases:

>100_bases
AAATATAACTATTTGGACAGAACGGGTGTTCTATAGGACAACCGGGCCAAACCGGATGAATTAAATAATAATATAAGTAT
TCACTAAAAAATATAGGCAT

Downstream 100 bases:

>100_bases
CCCACTATCTATGAATTCTTAAAATTTATCTGTGAGATGAAAGCCTATTTAAAATGGATAGTATTAATTACATGGTCGTT
CACGATGACGAGCTGTATAA

Product: putative outer membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGRAIDQGIADENKVKTLHVFIY
DTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKKADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLA
DLTNGFVMFNTSYPESTPAANLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD
KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTFISVSGVFTPDKVISTSNPSP
TQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQYADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNAN
ATSPQAPYNVYRNQYFKVNIHSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL

Sequences:

>Translated_463_residues
MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGRAIDQGIADENKVKTLHVFIY
DTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKKADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLA
DLTNGFVMFNTSYPESTPAANLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD
KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTFISVSGVFTPDKVISTSNPSP
TQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQYADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNAN
ATSPQAPYNVYRNQYFKVNIHSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL
>Mature_463_residues
MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGRAIDQGIADENKVKTLHVFIY
DTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKKADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLA
DLTNGFVMFNTSYPESTPAANLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD
KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTFISVSGVFTPDKVISTSNPSP
TQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQYADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNAN
ATSPQAPYNVYRNQYFKVNIHSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51249; Mature: 51249

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGR
CCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCC
AIDQGIADENKVKTLHVFIYDTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKK
CHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEECCC
ADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLADLTNGFVMFNTSYPESTPAA
CCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
NLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD
CCCCCCCHHHCCCEECCHHHHHHHHHEEECCCEEEECCCCEEEEEECCCCCCCEEEEEEE
KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTF
CCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEECCCEECCCEEE
ISVSGVFTPDKVISTSNPSPTQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQ
EEEECCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHEECCHHHHH
YADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNANATSPQAPYNVYRNQYFKVNI
HHHHHCCCCCCCEEECCEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCEEEEEEE
HSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL
EEEECCCCCCCCCCCCCEEECCCEEECCCEECCHHHCCCCCCC
>Mature Secondary Structure
MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGR
CCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCC
AIDQGIADENKVKTLHVFIYDTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKK
CHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEECCC
ADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLADLTNGFVMFNTSYPESTPAA
CCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
NLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD
CCCCCCCHHHCCCEECCHHHHHHHHHEEECCCEEEECCCCEEEEEECCCCCCCEEEEEEE
KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTF
CCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEECCCEECCCEEE
ISVSGVFTPDKVISTSNPSPTQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQ
EEEECCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHEECCHHHHH
YADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNANATSPQAPYNVYRNQYFKVNI
HHHHHCCCCCCCEEECCEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCEEEEEEE
HSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL
EEEECCCCCCCCCCCCCEEECCCEEECCCEECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA