| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009306
Identifier: 150009306
GI number: 150009306
Start: 3216492
End: 3217883
Strand: Direct
Name: 150009306
Synonym: BDI_2708
Alternate gene names: NA
Gene position: 3216492-3217883 (Clockwise)
Preceding gene: 150009290
Following gene: 150009307
Centisome position: 66.85
GC content: 41.45
Gene sequence:
>1392_bases ATGAAAACAAACAATTTGTATATTACGTTATTTGCGGCATTAGCTATCACTGCATGCAGTAAAGATAACGAGCTTCCTCA AGGATCTGCTAAAGACCCGAATGCCGATATGCCGGACGCATATACCTCTATCGCTATCAATATTCCCCACACCACTATGA CGAAAGCCGCTTCGGGCCGTGCCATTGATCAGGGAATAGCGGACGAGAACAAGGTCAAGACCTTACATGTATTTATCTAC GATACCGATGCCCCAAATACTCCGACAGTTGCCGAATTTACGGTAGACGACAATTCTCTTGCCCCCAAATCTCCCGGTAG CTCCACTTGGGTAACAAACAGAGCTATCAAAACTAAAAAAGCCGATAAATATATTTTTGCAGCAGTGAACCTCAATACAG ATATGGTCAACTATATCACAGCCAATGGACTCGGATCATTCAGTTACAATCAATTTGCCCAAGAAATCTCGCAACTGGCA GATCTGACAAATGGCTTTGTCATGTTCAACACGAGTTATCCGGAAAGTACCCCGGCTGCAAACTTATATGAAAATGAAAG CCTTGCCCAAACGAATCGCATGGCTATACCGGTTTCCCGCGTTGTAGCGAAAGCAGCAGTATTCAAAGCTAATGACTTTG TTGTAAACGGAGGAGGAAACATGACGGAGATAAAATTCGGTTGGAGGAACTTGAATAAAAAGTTCTATTTCATACAGGAT AAAAGAGACGGGATTATCAAGGACTATAATTGGGAAAATTATTCCGTATCGGATTTCGAAAGAGGGTCGGACGCCATAAA CACCTATACTTCAACGGACGATCCGGTCACTTTTTCCTACGCACCTGAGAACTCATTCAAATACAGCTTGGATCAAACAG AAGTAAACGGAACGACTTTTATTAGTGTCAGCGGAGTGTTTACGCCAGATAAAGTAATATCGACTTCAAATCCCAGCCCA ACCCAACCGGCAGATTTTGCGATTATCAGTAATCCCAATAATTCCGACAAAACATTCTATGTAGTCAGAACAGCCGACGG TATTGCCAACTATTTTGTAAATGGGACTATAGCACAACAATATGCCGATCTTTGCAGTAAAAATACTCCGGGGATGCCTC TTTACAACGGAACATACATATTGAATGAGAATACATTTACAAATGGTATCTGTTACTTCCACATTTTCGTCAATGCCAAT GCTACGTCACCTCAAGCACCTTATAACGTTTACCGGAATCAGTATTTTAAGGTAAACATCCATAGCATACAAGCTCCGGG AAATCCTTCAGACAATTTCGATACCGGAGAGGTGATTAAATCAGAAACATGGATAAGTACTGATATAGAAATAACTCCAT GGGAAGTCTATGAAGAAGACTATGATCTATAG
Upstream 100 bases:
>100_bases AAATATAACTATTTGGACAGAACGGGTGTTCTATAGGACAACCGGGCCAAACCGGATGAATTAAATAATAATATAAGTAT TCACTAAAAAATATAGGCAT
Downstream 100 bases:
>100_bases CCCACTATCTATGAATTCTTAAAATTTATCTGTGAGATGAAAGCCTATTTAAAATGGATAGTATTAATTACATGGTCGTT CACGATGACGAGCTGTATAA
Product: putative outer membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGRAIDQGIADENKVKTLHVFIY DTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKKADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLA DLTNGFVMFNTSYPESTPAANLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTFISVSGVFTPDKVISTSNPSP TQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQYADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNAN ATSPQAPYNVYRNQYFKVNIHSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL
Sequences:
>Translated_463_residues MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGRAIDQGIADENKVKTLHVFIY DTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKKADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLA DLTNGFVMFNTSYPESTPAANLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTFISVSGVFTPDKVISTSNPSP TQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQYADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNAN ATSPQAPYNVYRNQYFKVNIHSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL >Mature_463_residues MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGRAIDQGIADENKVKTLHVFIY DTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKKADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLA DLTNGFVMFNTSYPESTPAANLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTFISVSGVFTPDKVISTSNPSP TQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQYADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNAN ATSPQAPYNVYRNQYFKVNIHSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51249; Mature: 51249
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGR CCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCC AIDQGIADENKVKTLHVFIYDTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKK CHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEECCC ADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLADLTNGFVMFNTSYPESTPAA CCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC NLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD CCCCCCCHHHCCCEECCHHHHHHHHHEEECCCEEEECCCCEEEEEECCCCCCCEEEEEEE KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTF CCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEECCCEECCCEEE ISVSGVFTPDKVISTSNPSPTQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQ EEEECCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHEECCHHHHH YADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNANATSPQAPYNVYRNQYFKVNI HHHHHCCCCCCCEEECCEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCEEEEEEE HSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL EEEECCCCCCCCCCCCCEEECCCEEECCCEECCHHHCCCCCCC >Mature Secondary Structure MKTNNLYITLFAALAITACSKDNELPQGSAKDPNADMPDAYTSIAINIPHTTMTKAASGR CCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCC AIDQGIADENKVKTLHVFIYDTDAPNTPTVAEFTVDDNSLAPKSPGSSTWVTNRAIKTKK CHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEECCC ADKYIFAAVNLNTDMVNYITANGLGSFSYNQFAQEISQLADLTNGFVMFNTSYPESTPAA CCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC NLYENESLAQTNRMAIPVSRVVAKAAVFKANDFVVNGGGNMTEIKFGWRNLNKKFYFIQD CCCCCCCHHHCCCEECCHHHHHHHHHEEECCCEEEECCCCEEEEEECCCCCCCEEEEEEE KRDGIIKDYNWENYSVSDFERGSDAINTYTSTDDPVTFSYAPENSFKYSLDQTEVNGTTF CCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEECCCEECCCEEE ISVSGVFTPDKVISTSNPSPTQPADFAIISNPNNSDKTFYVVRTADGIANYFVNGTIAQQ EEEECCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHEECCHHHHH YADLCSKNTPGMPLYNGTYILNENTFTNGICYFHIFVNANATSPQAPYNVYRNQYFKVNI HHHHHCCCCCCCEEECCEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCEEEEEEE HSIQAPGNPSDNFDTGEVIKSETWISTDIEITPWEVYEEDYDL EEEECCCCCCCCCCCCCEEECCCEEECCCEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA