| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009268
Identifier: 150009268
GI number: 150009268
Start: 3169435
End: 3171885
Strand: Direct
Name: 150009268
Synonym: BDI_2670
Alternate gene names: NA
Gene position: 3169435-3171885 (Clockwise)
Preceding gene: 150009267
Following gene: 150009269
Centisome position: 65.87
GC content: 53.37
Gene sequence:
>2451_bases ATGAAAAATGTTTTAATATATTTTAGGAAGGATGCCCTCCTAGAGCAGGGAAACATGCCTTCCCAGAGCAGGGAAACATG CCTTCCCAAAGCAGGGAAGGATACTTCCCCAGGGCGAGGGGGGGTGTCTACCCAAAGAGCGATCCTATCGTCGCTGGCGC TACTCGGGCTGCTGGCCTTCTTACTCACCTCTTGCTCCACCACGAAGAACCTTCCCGAGGGAGCGGTCCTATATACCGGT ATCAAGAAAATAGAGGTGAAGAACGAGGATAAGACCAAACCCGGCGAAGCCGCCTTGGAAGAGGTCGAGGCCGCCCTAGC CTATCCCCCCAACAACGCCTTGCTGGGAAGCTCCTCGATCCGGGTGCCCTTCCCCTTCGGCCTGTGGGTCTACAACGCTT TCGTGAACAAGAAAGGGAAGGTCGGCAAGTGGATCTTCAACAAGCTGGCGTCGAAACCGGTGCTGATCACCACCGTGAAC CCGGAAGTCCGTGTCAAGGTAGCCCGGAACCTATTGAACGAATACGGTTATTTCAATGGAGAGACCTCTTTCGAGGTCGT ACCCGATCCCAAGAATCCCCGGAAGGCGAAGCTGGAATATAGCGTCACCATGAACGATCCGTATACGCTAGACAGCATCC AATACGTCCATATCCGTCACCGTGCCGACTCATTGATCGATGCCACGATCGGCGATCGTATCCTCCACAAAGGAGAGAAT TTCAATGTCGTCCAGTTGCAAGCCGAGCGGGAACGCATCTCGTCCTTGCTCCGTAACAACGGCTATTACTATTTCCGTCC CGATTTCATCACCTATCAAGCGGATACCTTGTTGAACCCCGGGAAAGTGGCCTTACGGGTGGCCCCGAAGGAAAGCCTGC CCCCCTCGGCCCTCCGCCCTTGGAAGCTCGGGGATATATCCGTCTGGCTAAACGGTTACCAGAATGAGACTCCCACGGAC TCGATCCGCTATAAGGACCTTACGATCCATTATGAGGGCAAGCTAAGGGTTCGCCCCTCGGTCATTTACAACCGTTTATA TTTCAAGCCGGGGGAACTTTACAACCAGCGGGCGCAGGAACGGACGCAAACCGCCCTGTCCCGCTTGGGTATCTTCCGTT ATGCCGAGTTGCAATATTCCCCCCGTGATACCATGCGCCGTCAAGATACGCTGGATCTGCGGATCAATACGGTCTACGAT CTTCCATTGGACGGCGAGCTCGAGTTGAACGTTACCGCCAAGAGCAACGACCAAGTGGGTCCGGGCGCCATTTTCAGCGT GACCAAACGGAATGTCTTCGGAGGGGGCGAGACCTTCGGCGTGAAACTCCGCGGCTCTTACGAATGGCAGACCGGCAACA AGCTGGATGGTAGCAACTCCAAGATCAACAGTTATGAGTTAGGCTTGACTACCACGCTGACTTTCCCACGGGTATTGTTC CCTACATTCAGCAAACGGGACATGAATTTCCCGGCCAGCACCACCTTCCGCCTCTATGCGGACCAGATGAACCGGGCCCG TTTCTTCAAGTTGCTGGCATTCGGTGGTGACGCCTCGTATGAGTTCCAGCCTACTGCCACGTCTCATCATTCCATCACCC CTTTCAAGCTGACGTTCAACTTGCTCCAGCATACCACGCACGAGTTCGACAGCATTACCAACGTGAATAAGGCTCTAAAA AAGAGTTTGCAAAATCAATTCATCCCGGCCATGAACTATACCTATACCTATGATGATTCCCCGATTACCAGTCGCCGGAA CCATCTTTGGTGGCAGGCATCCGTTACCCAAGCGGGCCTTGTCTTGGATGGGATTTATGCGTTAGCCGGGAAGAAATTCA ATAAAGAGGATAAGGAATTACTCGGCAACCCCTTCGCCCAATTCATCAAGGGAACCGCCGAGATACGTTATAATTACGCC CTCGGGCATAAGCAATATCTCGTAGGCCGATTAATGGCCGGCGCTATTTATAGCTACGGCAACGCCCGTACCTCCCCTTA TAACGAGCAATTCTACATCGGCGGAGCGAATAGCATCCGTGCTTTTACGATCCGCAGCATCGGTCCCGGACGCTACTATC AAAACAGCGATAACAATAAATACGCTTACATCGACCGTACGGGTGATCTTAAATTCGAGGCCAACCTCGAATACCGCTTC CCGATCCTTGGCGACCTGCATGGGGCCACTTTCCTCGACAGCGGTAACATCTGGCTGATCCGGAACGATCCGGATCGTCC CGGCGGACAACTGAAATGGGGTAGCTTCCTCAAGGATCTAGCCTTGGGAACCGGCTTCGGCCTGCGTTACGACCTCACCT TTATCGTCATCCGTTTCGACGTGGGTATCGGTCTGCATCTCCCTTACGATACCGGAAAGAAAGGCTATTACAATATCCCG AAATTCAAGGACGGCATGGGTTACCACTTCGCTATCGGATACCCCTTCTAG
Upstream 100 bases:
>100_bases GTATCGTGCTCCGCAAGAAAATGATGCATCTCAGGGAGCTATTCAACTTCAAGAAAACGAAAGTGAAACCAGTGAAAGAG GAAACAGAAAAGGAATGAAT
Downstream 100 bases:
>100_bases CTGTTCCATTCCTAGGATTCTGTGGTCTTATCCAAGGTATTTCATTTTCAATAGGTCAACCCTAATTGGAAATGAGATAC TTTTGCGCTCTCATTTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Lipoprotein; Surface Membrane Protein; OMP85 Family Outer Membrane Protein; Surface Antigen Protein
Number of amino acids: Translated: 816; Mature: 816
Protein sequence:
>816_residues MKNVLIYFRKDALLEQGNMPSQSRETCLPKAGKDTSPGRGGVSTQRAILSSLALLGLLAFLLTSCSTTKNLPEGAVLYTG IKKIEVKNEDKTKPGEAALEEVEAALAYPPNNALLGSSSIRVPFPFGLWVYNAFVNKKGKVGKWIFNKLASKPVLITTVN PEVRVKVARNLLNEYGYFNGETSFEVVPDPKNPRKAKLEYSVTMNDPYTLDSIQYVHIRHRADSLIDATIGDRILHKGEN FNVVQLQAERERISSLLRNNGYYYFRPDFITYQADTLLNPGKVALRVAPKESLPPSALRPWKLGDISVWLNGYQNETPTD SIRYKDLTIHYEGKLRVRPSVIYNRLYFKPGELYNQRAQERTQTALSRLGIFRYAELQYSPRDTMRRQDTLDLRINTVYD LPLDGELELNVTAKSNDQVGPGAIFSVTKRNVFGGGETFGVKLRGSYEWQTGNKLDGSNSKINSYELGLTTTLTFPRVLF PTFSKRDMNFPASTTFRLYADQMNRARFFKLLAFGGDASYEFQPTATSHHSITPFKLTFNLLQHTTHEFDSITNVNKALK KSLQNQFIPAMNYTYTYDDSPITSRRNHLWWQASVTQAGLVLDGIYALAGKKFNKEDKELLGNPFAQFIKGTAEIRYNYA LGHKQYLVGRLMAGAIYSYGNARTSPYNEQFYIGGANSIRAFTIRSIGPGRYYQNSDNNKYAYIDRTGDLKFEANLEYRF PILGDLHGATFLDSGNIWLIRNDPDRPGGQLKWGSFLKDLALGTGFGLRYDLTFIVIRFDVGIGLHLPYDTGKKGYYNIP KFKDGMGYHFAIGYPF
Sequences:
>Translated_816_residues MKNVLIYFRKDALLEQGNMPSQSRETCLPKAGKDTSPGRGGVSTQRAILSSLALLGLLAFLLTSCSTTKNLPEGAVLYTG IKKIEVKNEDKTKPGEAALEEVEAALAYPPNNALLGSSSIRVPFPFGLWVYNAFVNKKGKVGKWIFNKLASKPVLITTVN PEVRVKVARNLLNEYGYFNGETSFEVVPDPKNPRKAKLEYSVTMNDPYTLDSIQYVHIRHRADSLIDATIGDRILHKGEN FNVVQLQAERERISSLLRNNGYYYFRPDFITYQADTLLNPGKVALRVAPKESLPPSALRPWKLGDISVWLNGYQNETPTD SIRYKDLTIHYEGKLRVRPSVIYNRLYFKPGELYNQRAQERTQTALSRLGIFRYAELQYSPRDTMRRQDTLDLRINTVYD LPLDGELELNVTAKSNDQVGPGAIFSVTKRNVFGGGETFGVKLRGSYEWQTGNKLDGSNSKINSYELGLTTTLTFPRVLF PTFSKRDMNFPASTTFRLYADQMNRARFFKLLAFGGDASYEFQPTATSHHSITPFKLTFNLLQHTTHEFDSITNVNKALK KSLQNQFIPAMNYTYTYDDSPITSRRNHLWWQASVTQAGLVLDGIYALAGKKFNKEDKELLGNPFAQFIKGTAEIRYNYA LGHKQYLVGRLMAGAIYSYGNARTSPYNEQFYIGGANSIRAFTIRSIGPGRYYQNSDNNKYAYIDRTGDLKFEANLEYRF PILGDLHGATFLDSGNIWLIRNDPDRPGGQLKWGSFLKDLALGTGFGLRYDLTFIVIRFDVGIGLHLPYDTGKKGYYNIP KFKDGMGYHFAIGYPF >Mature_816_residues MKNVLIYFRKDALLEQGNMPSQSRETCLPKAGKDTSPGRGGVSTQRAILSSLALLGLLAFLLTSCSTTKNLPEGAVLYTG IKKIEVKNEDKTKPGEAALEEVEAALAYPPNNALLGSSSIRVPFPFGLWVYNAFVNKKGKVGKWIFNKLASKPVLITTVN PEVRVKVARNLLNEYGYFNGETSFEVVPDPKNPRKAKLEYSVTMNDPYTLDSIQYVHIRHRADSLIDATIGDRILHKGEN FNVVQLQAERERISSLLRNNGYYYFRPDFITYQADTLLNPGKVALRVAPKESLPPSALRPWKLGDISVWLNGYQNETPTD SIRYKDLTIHYEGKLRVRPSVIYNRLYFKPGELYNQRAQERTQTALSRLGIFRYAELQYSPRDTMRRQDTLDLRINTVYD LPLDGELELNVTAKSNDQVGPGAIFSVTKRNVFGGGETFGVKLRGSYEWQTGNKLDGSNSKINSYELGLTTTLTFPRVLF PTFSKRDMNFPASTTFRLYADQMNRARFFKLLAFGGDASYEFQPTATSHHSITPFKLTFNLLQHTTHEFDSITNVNKALK KSLQNQFIPAMNYTYTYDDSPITSRRNHLWWQASVTQAGLVLDGIYALAGKKFNKEDKELLGNPFAQFIKGTAEIRYNYA LGHKQYLVGRLMAGAIYSYGNARTSPYNEQFYIGGANSIRAFTIRSIGPGRYYQNSDNNKYAYIDRTGDLKFEANLEYRF PILGDLHGATFLDSGNIWLIRNDPDRPGGQLKWGSFLKDLALGTGFGLRYDLTFIVIRFDVGIGLHLPYDTGKKGYYNIP KFKDGMGYHFAIGYPF
Specific function: Unknown
COG id: COG0729
COG function: function code M; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92290; Mature: 92290
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVLIYFRKDALLEQGNMPSQSRETCLPKAGKDTSPGRGGVSTQRAILSSLALLGLLAF CCCEEEEEECCHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LLTSCSTTKNLPEGAVLYTGIKKIEVKNEDKTKPGEAALEEVEAALAYPPNNALLGSSSI HHHCCCCCCCCCCCEEEEECEEEEEECCCCCCCCHHHHHHHHHHHEECCCCCCEECCCCE RVPFPFGLWVYNAFVNKKGKVGKWIFNKLASKPVLITTVNPEVRVKVARNLLNEYGYFNG EECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHCCCCCC ETSFEVVPDPKNPRKAKLEYSVTMNDPYTLDSIQYVHIRHRADSLIDATIGDRILHKGEN CCEEEECCCCCCCCEEEEEEEEEECCCEEECCEEEEEEECCCCHHHHHHHHHHHHHCCCC FNVVQLQAERERISSLLRNNGYYYFRPDFITYQADTLLNPGKVALRVAPKESLPPSALRP CCEEEEEHHHHHHHHHHHCCCEEEECCCEEEEEHHHCCCCCCEEEEECCCCCCCCCCCCC WKLGDISVWLNGYQNETPTDSIRYKDLTIHYEGKLRVRPSVIYNRLYFKPGELYNQRAQE CCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCEEEECHHHHHHEEECCCHHHHHHHHHH RTQTALSRLGIFRYAELQYSPRDTMRRQDTLDLRINTVYDLPLDGELELNVTAKSNDQVG HHHHHHHHHCCEEEEEEEECCHHHHCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCC PGAIFSVTKRNVFGGGETFGVKLRGSYEWQTGNKLDGSNSKINSYELGLTTTLTFPRVLF CCEEEEEEECEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEECEEEEECCCHHHC PTFSKRDMNFPASTTFRLYADQMNRARFFKLLAFGGDASYEFQPTATSHHSITPFKLTFN CCCCCCCCCCCCCCEEEEEHHHCCHHEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHH LLQHTTHEFDSITNVNKALKKSLQNQFIPAMNYTYTYDDSPITSRRNHLWWQASVTQAGL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCH VLDGIYALAGKKFNKEDKELLGNPFAQFIKGTAEIRYNYALGHKQYLVGRLMAGAIYSYG HHHHHHHHHCCCCCCHHHHHHCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCC NARTSPYNEQFYIGGANSIRAFTIRSIGPGRYYQNSDNNKYAYIDRTGDLKFEANLEYRF CCCCCCCCCEEEECCCCCEEEEEEEECCCCCCEECCCCCEEEEEECCCCEEEEECCEEEC PILGDLHGATFLDSGNIWLIRNDPDRPGGQLKWGSFLKDLALGTGFGLRYDLTFIVIRFD CEEECCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEE VGIGLHLPYDTGKKGYYNIPKFKDGMGYHFAIGYPF CCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MKNVLIYFRKDALLEQGNMPSQSRETCLPKAGKDTSPGRGGVSTQRAILSSLALLGLLAF CCCEEEEEECCHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LLTSCSTTKNLPEGAVLYTGIKKIEVKNEDKTKPGEAALEEVEAALAYPPNNALLGSSSI HHHCCCCCCCCCCCEEEEECEEEEEECCCCCCCCHHHHHHHHHHHEECCCCCCEECCCCE RVPFPFGLWVYNAFVNKKGKVGKWIFNKLASKPVLITTVNPEVRVKVARNLLNEYGYFNG EECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHCCCCCC ETSFEVVPDPKNPRKAKLEYSVTMNDPYTLDSIQYVHIRHRADSLIDATIGDRILHKGEN CCEEEECCCCCCCCEEEEEEEEEECCCEEECCEEEEEEECCCCHHHHHHHHHHHHHCCCC FNVVQLQAERERISSLLRNNGYYYFRPDFITYQADTLLNPGKVALRVAPKESLPPSALRP CCEEEEEHHHHHHHHHHHCCCEEEECCCEEEEEHHHCCCCCCEEEEECCCCCCCCCCCCC WKLGDISVWLNGYQNETPTDSIRYKDLTIHYEGKLRVRPSVIYNRLYFKPGELYNQRAQE CCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCEEEECHHHHHHEEECCCHHHHHHHHHH RTQTALSRLGIFRYAELQYSPRDTMRRQDTLDLRINTVYDLPLDGELELNVTAKSNDQVG HHHHHHHHHCCEEEEEEEECCHHHHCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCC PGAIFSVTKRNVFGGGETFGVKLRGSYEWQTGNKLDGSNSKINSYELGLTTTLTFPRVLF CCEEEEEEECEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEECEEEEECCCHHHC PTFSKRDMNFPASTTFRLYADQMNRARFFKLLAFGGDASYEFQPTATSHHSITPFKLTFN CCCCCCCCCCCCCCEEEEEHHHCCHHEEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHH LLQHTTHEFDSITNVNKALKKSLQNQFIPAMNYTYTYDDSPITSRRNHLWWQASVTQAGL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCH VLDGIYALAGKKFNKEDKELLGNPFAQFIKGTAEIRYNYALGHKQYLVGRLMAGAIYSYG HHHHHHHHHCCCCCCHHHHHHCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCC NARTSPYNEQFYIGGANSIRAFTIRSIGPGRYYQNSDNNKYAYIDRTGDLKFEANLEYRF CCCCCCCCCEEEECCCCCEEEEEEEECCCCCCEECCCCCEEEEEECCCCEEEEECCEEEC PILGDLHGATFLDSGNIWLIRNDPDRPGGQLKWGSFLKDLALGTGFGLRYDLTFIVIRFD CEEECCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEE VGIGLHLPYDTGKKGYYNIPKFKDGMGYHFAIGYPF CCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA