| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is btuB [H]
Identifier: 150009256
GI number: 150009256
Start: 3143561
End: 3146275
Strand: Reverse
Name: btuB [H]
Synonym: BDI_2658
Alternate gene names: 150009256
Gene position: 3146275-3143561 (Counterclockwise)
Preceding gene: 150009257
Following gene: 150009254
Centisome position: 65.39
GC content: 46.56
Gene sequence:
>2715_bases ATGAAGAATACTTACAAATTGATATTATTTCTTCTCTTGATAACCCATGCCTCTTTCGGCCAAGACGTGAAAGGGTATAT TAAGGATGCGGAGAGCAAGGAAGCTTTAGCCGGGGTAAACGTTTTTTATAAGGACAAAGGGGGTACGAGAGGAACTGTGT CTGATATAAACGGTTATTATGAGCTGAAAGTGACGGATGGCGACGCTGTATTGACTTTTAGCTATCTGGGATATGAAACG TTGAGCGTTCCCGTGAAAGTAGATCCGGGAGAGTTCTTGACGCATGACGTATCCTTGCGAACAAACTCAAACATGATGGA CGAGGTCGTCGTGAGCGTCGGGCGTTATGAGCAAAAGCTAAGCGATATTACCGTCTCTATGGAATTACTGAAAGCGAAAG ATATCACTCGTCAGTCTCCGAAAGATTTAACGGACGTATTGAAGAATATCTCCGGTGTGGACGTGACGGACCGGCAACCT TCCGTACGCGGTGGTACGGGATGGACCTATGGCGTGGGTAGCCGTTGCTTGATTCTGGTGGACGGAATGTCGGTGCTAAC TCCGGGTTCCGGCGAGATAAACTGGAATATGATCCCGATGGAGAACGTCGATCAAGTAGAGGTACTGAAAGGGGCCTCTT CCGTATTATATGGCTCTTCTGCCTTGAATGGTTTGATTCACGTGAAAACGAAACGCCCCGGATTGGATCCGGTAACACAG GTGAACGTACAAGGAGGTCTGTATGGAAAGCCACGCCAAGACGGGACGCCTTTATATGGAGGCTTGGATCTCTCTCATTC CCGTAGGATCAAGAATTTTGATTTGACAGTGGGGGCTAATACATTCTTGGACGACGGGTATCGGCAGGATAATTACAACC GCCGTGTCCGGGTCGGTGGGAATCTTACGTATCACGATCCCCGGGTACAAGGGTTGAACTATGGCGTGAACGTGAATTAT TTGTATAACGATTATACCGGTTTCTTTATCTGGCGTTCTCCGGAGGAGCCCTATATTCAATCTCCGCTGGCGAATATGGG ACGCCGTGAGAATACATTTTATATAGATCCCTTCTTGAATTATACGAATTCGGAAAAAGGGACGACTCATCGTTTCAAGG GGCGTTTCTTCCATCGGGGAAGCCGTATCATCACGCATACTACGGATAAGTCTCTTTTTGACATAACGAATAATATGGGT TTTGATATCTCATCCGTCCCGGAGATTATCAATATAGCGCAAAACTGGCAAACTGAGTTGTTGCCGACCTTCTTACCGTA TTTACCGGAGGTGATGAACGGGAAGGTGAGCGGATTGATGGCTGAATTGGGCAAGCTGGGAAATCATTTTTTCCCGACAG CTACCTCGGCGGATTATATGGACTTGATTTCTTGGGTGATGGGACGTACTCCGCTACCCGATAAGAATAACGTAGGGGCT TGGTTGGTAGATGCCATGAAACCGATGGAGAAAAAAGCGCCGGAGGCTACGGATCATACCTATTCCTATAATCTGGATTA CCAATTCAGCAAGAAGTTCGAACATTCACAACTCACGGTTGGAGGTACTTATGAGCGTATTCATGCGGATTCGAAAGTGA CCGGGCAGCATAGTAGCGATAATGTGGCTACCTTCCTGCAATATGATCATAAGTTTATCGATCGTTTGAACGTCTCGGTC GGTGTTCGTCTGGAGTATTACCGGGTCGATGATTTCTACCGGGAAGCGGAGACGAAGATTTTCGGGGCGAAGGTTCCGGT AAAACCTGTTTTCCGTGGAGGCTTGAATTATGAATTGGGTGAGTATAGTTTTATCCGGGCATCTTTCGGACAGGGATACC GTTATCCATCCGTTACGGAGAAGTTTATCCTGAAGGATATCGGAGGTGTGGGAGCTTTCCCGAACGCTGAATTGAAAGCG GAGCAAGGTTATAATGCCGAACTTGGTTTCAAGCAAGGCTATAAGTTCGGCAATTTGAAGGGCTTTATCGATGTGGCCGG CTTTTATACCCGTTACAAGGATATGATCGAGTTCCGTTTCGGCCTGTTTAATAATAAGACCTTCGATTATATCGATGGGC TTTCCAAGTTGTTCAATGCGTTCTCTAGCGGCGACGGCTTAGGAATCGGCGCTCAGTTCACGAACGTAGGCCGGGCGGAG ATTTATGGGGTAGACTTGTCTACCTCGGGTGTGTATGAGTTTAACCGTGATACTCGTCTGGCATATACTTTGGGGTATGT TTATACGAATCCGATCGATATGGACGTGGATTCACGGAACGCGGAGGAGGAAGCGAATGATGACTTAATGGCGATGCGTT CGAAATCGAATGACAGCAAGTATTTAAAATATCGCCAGAAACATTCCGTAAAGGGGGTATTTGATCTGGAATGGAAACAG TTTAATATCGGAACGAATATGTCATGGAAAAGCAAGACATTGGCGGTCGATTATTTTATGGTTGATGAGCGTACGAAAGC GGAGCTTAACCTGATGGATTATATGCGCTCGATGCTATTCGGAAACTTACATGATTATTGGGCAGAGAACAATAAAGGAT ATTTCGTCATGGATATGCGTGTCGGGATGAAAGTGACGAAGAATATCCATGTACAAGGACTGGTGAACAACCTCTTAAAC AAGCGCTATAGCGCCCGCCCGATGGATGTCGGCGCACCCCGGACTTTCATTCTGCAAGTAGGAGCCAATTTCTAA
Upstream 100 bases:
>100_bases AAAGAGTATAGTCTATTTACAGGACTTCTTGGTCTGTTTTTAAATACCTGTCTAGCGGTATGGAATAAACCTTTATATTT GTGCGAAATATAATTTGGAT
Downstream 100 bases:
>100_bases CAAATTACCTAGTTGTAGAGACGGAGCACGCTCCGTCTCTACAACATGTGATAGTTTTTCAATTCGCTTCGTAAACGAAT CGCTTGATTGTTCGTCACCT
Product: putative vitamin B12 receptor
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 904; Mature: 904
Protein sequence:
>904_residues MKNTYKLILFLLLITHASFGQDVKGYIKDAESKEALAGVNVFYKDKGGTRGTVSDINGYYELKVTDGDAVLTFSYLGYET LSVPVKVDPGEFLTHDVSLRTNSNMMDEVVVSVGRYEQKLSDITVSMELLKAKDITRQSPKDLTDVLKNISGVDVTDRQP SVRGGTGWTYGVGSRCLILVDGMSVLTPGSGEINWNMIPMENVDQVEVLKGASSVLYGSSALNGLIHVKTKRPGLDPVTQ VNVQGGLYGKPRQDGTPLYGGLDLSHSRRIKNFDLTVGANTFLDDGYRQDNYNRRVRVGGNLTYHDPRVQGLNYGVNVNY LYNDYTGFFIWRSPEEPYIQSPLANMGRRENTFYIDPFLNYTNSEKGTTHRFKGRFFHRGSRIITHTTDKSLFDITNNMG FDISSVPEIINIAQNWQTELLPTFLPYLPEVMNGKVSGLMAELGKLGNHFFPTATSADYMDLISWVMGRTPLPDKNNVGA WLVDAMKPMEKKAPEATDHTYSYNLDYQFSKKFEHSQLTVGGTYERIHADSKVTGQHSSDNVATFLQYDHKFIDRLNVSV GVRLEYYRVDDFYREAETKIFGAKVPVKPVFRGGLNYELGEYSFIRASFGQGYRYPSVTEKFILKDIGGVGAFPNAELKA EQGYNAELGFKQGYKFGNLKGFIDVAGFYTRYKDMIEFRFGLFNNKTFDYIDGLSKLFNAFSSGDGLGIGAQFTNVGRAE IYGVDLSTSGVYEFNRDTRLAYTLGYVYTNPIDMDVDSRNAEEEANDDLMAMRSKSNDSKYLKYRQKHSVKGVFDLEWKQ FNIGTNMSWKSKTLAVDYFMVDERTKAELNLMDYMRSMLFGNLHDYWAENNKGYFVMDMRVGMKVTKNIHVQGLVNNLLN KRYSARPMDVGAPRTFILQVGANF
Sequences:
>Translated_904_residues MKNTYKLILFLLLITHASFGQDVKGYIKDAESKEALAGVNVFYKDKGGTRGTVSDINGYYELKVTDGDAVLTFSYLGYET LSVPVKVDPGEFLTHDVSLRTNSNMMDEVVVSVGRYEQKLSDITVSMELLKAKDITRQSPKDLTDVLKNISGVDVTDRQP SVRGGTGWTYGVGSRCLILVDGMSVLTPGSGEINWNMIPMENVDQVEVLKGASSVLYGSSALNGLIHVKTKRPGLDPVTQ VNVQGGLYGKPRQDGTPLYGGLDLSHSRRIKNFDLTVGANTFLDDGYRQDNYNRRVRVGGNLTYHDPRVQGLNYGVNVNY LYNDYTGFFIWRSPEEPYIQSPLANMGRRENTFYIDPFLNYTNSEKGTTHRFKGRFFHRGSRIITHTTDKSLFDITNNMG FDISSVPEIINIAQNWQTELLPTFLPYLPEVMNGKVSGLMAELGKLGNHFFPTATSADYMDLISWVMGRTPLPDKNNVGA WLVDAMKPMEKKAPEATDHTYSYNLDYQFSKKFEHSQLTVGGTYERIHADSKVTGQHSSDNVATFLQYDHKFIDRLNVSV GVRLEYYRVDDFYREAETKIFGAKVPVKPVFRGGLNYELGEYSFIRASFGQGYRYPSVTEKFILKDIGGVGAFPNAELKA EQGYNAELGFKQGYKFGNLKGFIDVAGFYTRYKDMIEFRFGLFNNKTFDYIDGLSKLFNAFSSGDGLGIGAQFTNVGRAE IYGVDLSTSGVYEFNRDTRLAYTLGYVYTNPIDMDVDSRNAEEEANDDLMAMRSKSNDSKYLKYRQKHSVKGVFDLEWKQ FNIGTNMSWKSKTLAVDYFMVDERTKAELNLMDYMRSMLFGNLHDYWAENNKGYFVMDMRVGMKVTKNIHVQGLVNNLLN KRYSARPMDVGAPRTFILQVGANF >Mature_904_residues MKNTYKLILFLLLITHASFGQDVKGYIKDAESKEALAGVNVFYKDKGGTRGTVSDINGYYELKVTDGDAVLTFSYLGYET LSVPVKVDPGEFLTHDVSLRTNSNMMDEVVVSVGRYEQKLSDITVSMELLKAKDITRQSPKDLTDVLKNISGVDVTDRQP SVRGGTGWTYGVGSRCLILVDGMSVLTPGSGEINWNMIPMENVDQVEVLKGASSVLYGSSALNGLIHVKTKRPGLDPVTQ VNVQGGLYGKPRQDGTPLYGGLDLSHSRRIKNFDLTVGANTFLDDGYRQDNYNRRVRVGGNLTYHDPRVQGLNYGVNVNY LYNDYTGFFIWRSPEEPYIQSPLANMGRRENTFYIDPFLNYTNSEKGTTHRFKGRFFHRGSRIITHTTDKSLFDITNNMG FDISSVPEIINIAQNWQTELLPTFLPYLPEVMNGKVSGLMAELGKLGNHFFPTATSADYMDLISWVMGRTPLPDKNNVGA WLVDAMKPMEKKAPEATDHTYSYNLDYQFSKKFEHSQLTVGGTYERIHADSKVTGQHSSDNVATFLQYDHKFIDRLNVSV GVRLEYYRVDDFYREAETKIFGAKVPVKPVFRGGLNYELGEYSFIRASFGQGYRYPSVTEKFILKDIGGVGAFPNAELKA EQGYNAELGFKQGYKFGNLKGFIDVAGFYTRYKDMIEFRFGLFNNKTFDYIDGLSKLFNAFSSGDGLGIGAQFTNVGRAE IYGVDLSTSGVYEFNRDTRLAYTLGYVYTNPIDMDVDSRNAEEEANDDLMAMRSKSNDSKYLKYRQKHSVKGVFDLEWKQ FNIGTNMSWKSKTLAVDYFMVDERTKAELNLMDYMRSMLFGNLHDYWAENNKGYFVMDMRVGMKVTKNIHVQGLVNNLLN KRYSARPMDVGAPRTFILQVGANF
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: COG4206
COG function: function code H; Outer membrane cobalamin receptor protein
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=133, Percent_Identity=33.0827067669173, Blast_Score=74, Evalue=6e-14, Organism=Escherichia coli, GI1790405, Length=147, Percent_Identity=29.9319727891156, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 102127; Mature: 102127
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTYKLILFLLLITHASFGQDVKGYIKDAESKEALAGVNVFYKDKGGTRGTVSDINGYY CCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHCCCEEEEECCCCCCCCHHCCCCEE ELKVTDGDAVLTFSYLGYETLSVPVKVDPGEFLTHDVSLRTNSNMMDEVVVSVGRYEQKL EEEEECCCEEEEEEECCEEEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH SDITVSMELLKAKDITRQSPKDLTDVLKNISGVDVTDRQPSVRGGTGWTYGVGSRCLILV HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEE DGMSVLTPGSGEINWNMIPMENVDQVEVLKGASSVLYGSSALNGLIHVKTKRPGLDPVTQ CCCEEECCCCCCEEEEEECCCCCCHHHHHHCCCHHEECCHHCCCEEEEEECCCCCCCCEE VNVQGGLYGKPRQDGTPLYGGLDLSHSRRIKNFDLTVGANTFLDDGYRQDNYNRRVRVGG EEECCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCEEEECC NLTYHDPRVQGLNYGVNVNYLYNDYTGFFIWRSPEEPYIQSPLANMGRRENTFYIDPFLN EEEECCCCCCCEECCEEEEEEEECCEEEEEECCCCCCHHHCHHHHCCCCCCEEEEECCCC YTNSEKGTTHRFKGRFFHRGSRIITHTTDKSLFDITNNMGFDISSVPEIINIAQNWQTEL CCCCCCCCCEEECCEEEECCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHH LPTFLPYLPEVMNGKVSGLMAELGKLGNHFFPTATSADYMDLISWVMGRTPLPDKNNVGA HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCH WLVDAMKPMEKKAPEATDHTYSYNLDYQFSKKFEHSQLTVGGTYERIHADSKVTGQHSSD HHHHHHHHHHHCCCCCCCCEEEEEECCHHCCCCCCCEEEECCCHHEEECCCCCCCCCCCC NVATFLQYDHKFIDRLNVSVGVRLEYYRVDDFYREAETKIFGAKVPVKPVFRGGLNYELG CHHHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHHHHCEEEECCCCCCHHHCCCCCCCCC EYSFIRASFGQGYRYPSVTEKFILKDIGGVGAFPNAELKAEQGYNAELGFKQGYKFGNLK CEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHCCCCCCCCC GFIDVAGFYTRYKDMIEFRFGLFNNKTFDYIDGLSKLFNAFSSGDGLGIGAQFTNVGRAE EEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCEECCCCCEE IYGVDLSTSGVYEFNRDTRLAYTLGYVYTNPIDMDVDSRNAEEEANDDLMAMRSKSNDSK EEEEECCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHH YLKYRQKHSVKGVFDLEWKQFNIGTNMSWKSKTLAVDYFMVDERTKAELNLMDYMRSMLF HHHHHHHCCCCCEEEECEEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHH GNLHDYWAENNKGYFVMDMRVGMKVTKNIHVQGLVNNLLNKRYSARPMDVGAPRTFILQV CCHHHHHCCCCCCEEEEEEEECEEEECCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE GANF CCCC >Mature Secondary Structure MKNTYKLILFLLLITHASFGQDVKGYIKDAESKEALAGVNVFYKDKGGTRGTVSDINGYY CCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHCCCEEEEECCCCCCCCHHCCCCEE ELKVTDGDAVLTFSYLGYETLSVPVKVDPGEFLTHDVSLRTNSNMMDEVVVSVGRYEQKL EEEEECCCEEEEEEECCEEEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH SDITVSMELLKAKDITRQSPKDLTDVLKNISGVDVTDRQPSVRGGTGWTYGVGSRCLILV HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEE DGMSVLTPGSGEINWNMIPMENVDQVEVLKGASSVLYGSSALNGLIHVKTKRPGLDPVTQ CCCEEECCCCCCEEEEEECCCCCCHHHHHHCCCHHEECCHHCCCEEEEEECCCCCCCCEE VNVQGGLYGKPRQDGTPLYGGLDLSHSRRIKNFDLTVGANTFLDDGYRQDNYNRRVRVGG EEECCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCEEEECC NLTYHDPRVQGLNYGVNVNYLYNDYTGFFIWRSPEEPYIQSPLANMGRRENTFYIDPFLN EEEECCCCCCCEECCEEEEEEEECCEEEEEECCCCCCHHHCHHHHCCCCCCEEEEECCCC YTNSEKGTTHRFKGRFFHRGSRIITHTTDKSLFDITNNMGFDISSVPEIINIAQNWQTEL CCCCCCCCCEEECCEEEECCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHH LPTFLPYLPEVMNGKVSGLMAELGKLGNHFFPTATSADYMDLISWVMGRTPLPDKNNVGA HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCH WLVDAMKPMEKKAPEATDHTYSYNLDYQFSKKFEHSQLTVGGTYERIHADSKVTGQHSSD HHHHHHHHHHHCCCCCCCCEEEEEECCHHCCCCCCCEEEECCCHHEEECCCCCCCCCCCC NVATFLQYDHKFIDRLNVSVGVRLEYYRVDDFYREAETKIFGAKVPVKPVFRGGLNYELG CHHHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHHHHCEEEECCCCCCHHHCCCCCCCCC EYSFIRASFGQGYRYPSVTEKFILKDIGGVGAFPNAELKAEQGYNAELGFKQGYKFGNLK CEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHCCCCCCCCC GFIDVAGFYTRYKDMIEFRFGLFNNKTFDYIDGLSKLFNAFSSGDGLGIGAQFTNVGRAE EEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCEECCCCCEE IYGVDLSTSGVYEFNRDTRLAYTLGYVYTNPIDMDVDSRNAEEEANDDLMAMRSKSNDSK EEEEECCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHH YLKYRQKHSVKGVFDLEWKQFNIGTNMSWKSKTLAVDYFMVDERTKAELNLMDYMRSMLF HHHHHHHCCCCCEEEECEEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHH GNLHDYWAENNKGYFVMDMRVGMKVTKNIHVQGLVNNLLNKRYSARPMDVGAPRTFILQV CCHHHHHCCCCCCEEEEEEEECEEEECCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE GANF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA