| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009255
Identifier: 150009255
GI number: 150009255
Start: 3142824
End: 3143522
Strand: Direct
Name: 150009255
Synonym: BDI_2657
Alternate gene names: NA
Gene position: 3142824-3143522 (Clockwise)
Preceding gene: 150009252
Following gene: 150009266
Centisome position: 65.32
GC content: 46.92
Gene sequence:
>699_bases ATGGAAAAGAATATACAAGACAAGGATTTGGGAGTCATAACGCTCCGTACCACTCCCCGGGCCACTCGATACACGCTCAA GATATCAAAAGGAAAAATAACCGCCACGATGCCACCCGGGGGAGACGAGAAACGTATGATCGCTTTTATCATGGAGAACA AGGCCCGGCTGGTAAAAGCGCTCCAGAAGCATCCGGCCCGGCCCCTGCTCGACGAAAGATCGGAGTTACAGGCTACGACA TTCCGCTTGCATATCTTCCGCACCGAGCGAAGTAATTTCTACATGAGATTGGAGGATGGGGTACTGCATATCGCTTGTCC GAATGAGACTCGTTTCGAGGAGGAAGAGGTGCAATCCTTATTGAAATCCATGCTGGAGAAGGCGCTCCGCCACGAGGCGA AACGGTTGTTGCCGGAACGTATCACGCTATTGGCTAGGCAACATGGATTTATGTTGACCGGGGTGAAAATCAATAATAGC AAAACGCATTGGGGAAGTTGTACAATGAAGAAGAGCATTAACCTCTCGCAATCATTAATGCTTCTTCCTTGGCATTTGGT GGATTATGTATTATTGCATGAGCTTTGCCATACGATAGAGATGAACCATAGCGAAAGATTCTGGAAACTAATGGATAAGG TGACGAACAATCAAGCGATTCGTTTACGAAGCGAATTGAAAAACTATCACATGTTGTAG
Upstream 100 bases:
>100_bases TAATTTATTATATTGATTATGTTTTTAACCTTTACGATCGCGAAGATAATCAATTCCATCGTATTATTGTTTCTCTCAAT GTATTACTTTTGTGGCAGGA
Downstream 100 bases:
>100_bases AGACGGAGCGTGCTCCGTCTCTACAACTAGGTAATTTGTTAGAAATTGGCTCCTACTTGCAGAATGAAAGTCCGGGGTGC GCCGACATCCATCGGGCGGG
Product: putative zinc protease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MEKNIQDKDLGVITLRTTPRATRYTLKISKGKITATMPPGGDEKRMIAFIMENKARLVKALQKHPARPLLDERSELQATT FRLHIFRTERSNFYMRLEDGVLHIACPNETRFEEEEVQSLLKSMLEKALRHEAKRLLPERITLLARQHGFMLTGVKINNS KTHWGSCTMKKSINLSQSLMLLPWHLVDYVLLHELCHTIEMNHSERFWKLMDKVTNNQAIRLRSELKNYHML
Sequences:
>Translated_232_residues MEKNIQDKDLGVITLRTTPRATRYTLKISKGKITATMPPGGDEKRMIAFIMENKARLVKALQKHPARPLLDERSELQATT FRLHIFRTERSNFYMRLEDGVLHIACPNETRFEEEEVQSLLKSMLEKALRHEAKRLLPERITLLARQHGFMLTGVKINNS KTHWGSCTMKKSINLSQSLMLLPWHLVDYVLLHELCHTIEMNHSERFWKLMDKVTNNQAIRLRSELKNYHML >Mature_232_residues MEKNIQDKDLGVITLRTTPRATRYTLKISKGKITATMPPGGDEKRMIAFIMENKARLVKALQKHPARPLLDERSELQATT FRLHIFRTERSNFYMRLEDGVLHIACPNETRFEEEEVQSLLKSMLEKALRHEAKRLLPERITLLARQHGFMLTGVKINNS KTHWGSCTMKKSINLSQSLMLLPWHLVDYVLLHELCHTIEMNHSERFWKLMDKVTNNQAIRLRSELKNYHML
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27201; Mature: 27201
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNIQDKDLGVITLRTTPRATRYTLKISKGKITATMPPGGDEKRMIAFIMENKARLVKA CCCCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEECCCCCCCCCEEEEEHHHHHHHHHH LQKHPARPLLDERSELQATTFRLHIFRTERSNFYMRLEDGVLHIACPNETRFEEEEVQSL HHHCCCCCCCCCHHHHEEEEEEEEEEEECCCCEEEEEECCEEEEECCCCCCCCHHHHHHH LKSMLEKALRHEAKRLLPERITLLARQHGFMLTGVKINNSKTHWGSCTMKKSINLSQSLM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEECCCCCCCHHH LLPWHLVDYVLLHELCHTIEMNHSERFWKLMDKVTNNQAIRLRSELKNYHML HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHCCCC >Mature Secondary Structure MEKNIQDKDLGVITLRTTPRATRYTLKISKGKITATMPPGGDEKRMIAFIMENKARLVKA CCCCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEECCCCCCCCCEEEEEHHHHHHHHHH LQKHPARPLLDERSELQATTFRLHIFRTERSNFYMRLEDGVLHIACPNETRFEEEEVQSL HHHCCCCCCCCCHHHHEEEEEEEEEEEECCCCEEEEEECCEEEEECCCCCCCCHHHHHHH LKSMLEKALRHEAKRLLPERITLLARQHGFMLTGVKINNSKTHWGSCTMKKSINLSQSLM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEECCCCCCCHHH LLPWHLVDYVLLHELCHTIEMNHSERFWKLMDKVTNNQAIRLRSELKNYHML HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA