Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150009197

Identifier: 150009197

GI number: 150009197

Start: 3075443

End: 3076597

Strand: Reverse

Name: 150009197

Synonym: BDI_2599

Alternate gene names: NA

Gene position: 3076597-3075443 (Counterclockwise)

Preceding gene: 150009198

Following gene: 150009196

Centisome position: 63.94

GC content: 48.74

Gene sequence:

>1155_bases
ATGATGAATTATACGAGGAGGATAGATACGGATAAAGCGGTAGAAATGCAAATCTCTTCATTCACGGGTAAAGGTGGAAC
AACGGAATATCAGGTGATGGTATCTATCACGGACCCTTGTTTGTCTTTCGTGGAGCAATTGCAAAACCTTTTGCGGGTTT
ATGTGACTGTCGTGAAGGAAGAGCTATCGAATGACGCTACCGCCGTTTTCCGCCGTTATTTTTTAAGTGACGCAGCTAAT
CAGACGGATAGCGTGATGGAGTGGGAGTGCGAGAGCGCCTTTTGCCCGCTCTCTATCGTTCAGCAGCCGCCTTTGAATGG
AACAAAGATCGCTATGTGGACCTATTTGCAAACGGGGATGTCGGTACAAACGTACGATTCCGGTTTACTGGAAGCGTCGC
ATAACGGTTATAGGCACCTCTGGGGGGGAGGTGCCTTCAATAAGGCGGCCAATTCGGAATACCAGACCCGGCTTTTATTG
AATGACTATGTGATGCAATTGATGGGGCAGCGTTGTACGTTGGCCTCTCATTGTGTCCGTACTTGGTTCTTTGTGCAAAA
CGTAGACGTGAATTACGCCGGTGTGGTGAAAGCCCGGAAAGAAGTTTTTATCACGCAGAATCTTACGGAGAAGACGCATT
ATATTGCTAGCACGGGTATTGAGGGACGTCATGCCGATCCCTCGGTGTTGGTACAGATGGACAGTTATGCGGTGGATGGA
TTGGAGCCGGGACAGATTCAGTTCCTTTACGCTCCCACGCACTTGAATCCTACTTATGAATATGGAGTAACTTTCGAGCG
GGGTACGGCTGTTACGTATGGGGATCGTAAACAGGTCTTTATCTCGGGTACGGCGAGTATCGATAACCGGGGAGAGATTG
TCTATCCGGGCGATATCGTAAAACAAACCGAGCGGATGATGGAAAATATCAGCGTGTTGCTGAAAGAGGCGGACGCTACT
ACTCGTGATATTACGCAGGCGATCTCCTATTTGAGAGATATGGCTGATTATGCGGTGGTTAAGAAGTATTTTGAGGCGCA
TTACCCGGATTTGCCACATTTGATAGTCTTGGCCCCCGTTTGCCGTCCCGGATGGTTGATAGAGACTGAGTGTATAGCGG
TCGTGCCGACGGAGTCGTCCTTTAAGCCTTTGTGA

Upstream 100 bases:

>100_bases
TACATAAGGATATGTTCAATAGTTCCGGGAAACAGGAGGTCCTTGCTTTGATCCAAGGTTGGATCTTAGGAGGGGCATTG
GATAATTGATAAGAAAGAAA

Downstream 100 bases:

>100_bases
AATAATAATAAATGTACGAGATATGGAAGAAAAAGGAGTATATTTGGCTATTCAAACACCAAGACAAGTTAGAAAGAAGC
CTATGTATAAAAATGGAATG

Product: putative translation initiation inhibitor

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-Psp; Endoribonuclease L-PSP Family; Endoribonuclease L-PSP Family Protein; Endoribonuclease

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MMNYTRRIDTDKAVEMQISSFTGKGGTTEYQVMVSITDPCLSFVEQLQNLLRVYVTVVKEELSNDATAVFRRYFLSDAAN
QTDSVMEWECESAFCPLSIVQQPPLNGTKIAMWTYLQTGMSVQTYDSGLLEASHNGYRHLWGGGAFNKAANSEYQTRLLL
NDYVMQLMGQRCTLASHCVRTWFFVQNVDVNYAGVVKARKEVFITQNLTEKTHYIASTGIEGRHADPSVLVQMDSYAVDG
LEPGQIQFLYAPTHLNPTYEYGVTFERGTAVTYGDRKQVFISGTASIDNRGEIVYPGDIVKQTERMMENISVLLKEADAT
TRDITQAISYLRDMADYAVVKKYFEAHYPDLPHLIVLAPVCRPGWLIETECIAVVPTESSFKPL

Sequences:

>Translated_384_residues
MMNYTRRIDTDKAVEMQISSFTGKGGTTEYQVMVSITDPCLSFVEQLQNLLRVYVTVVKEELSNDATAVFRRYFLSDAAN
QTDSVMEWECESAFCPLSIVQQPPLNGTKIAMWTYLQTGMSVQTYDSGLLEASHNGYRHLWGGGAFNKAANSEYQTRLLL
NDYVMQLMGQRCTLASHCVRTWFFVQNVDVNYAGVVKARKEVFITQNLTEKTHYIASTGIEGRHADPSVLVQMDSYAVDG
LEPGQIQFLYAPTHLNPTYEYGVTFERGTAVTYGDRKQVFISGTASIDNRGEIVYPGDIVKQTERMMENISVLLKEADAT
TRDITQAISYLRDMADYAVVKKYFEAHYPDLPHLIVLAPVCRPGWLIETECIAVVPTESSFKPL
>Mature_384_residues
MMNYTRRIDTDKAVEMQISSFTGKGGTTEYQVMVSITDPCLSFVEQLQNLLRVYVTVVKEELSNDATAVFRRYFLSDAAN
QTDSVMEWECESAFCPLSIVQQPPLNGTKIAMWTYLQTGMSVQTYDSGLLEASHNGYRHLWGGGAFNKAANSEYQTRLLL
NDYVMQLMGQRCTLASHCVRTWFFVQNVDVNYAGVVKARKEVFITQNLTEKTHYIASTGIEGRHADPSVLVQMDSYAVDG
LEPGQIQFLYAPTHLNPTYEYGVTFERGTAVTYGDRKQVFISGTASIDNRGEIVYPGDIVKQTERMMENISVLLKEADAT
TRDITQAISYLRDMADYAVVKKYFEAHYPDLPHLIVLAPVCRPGWLIETECIAVVPTESSFKPL

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43254; Mature: 43254

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNYTRRIDTDKAVEMQISSFTGKGGTTEYQVMVSITDPCLSFVEQLQNLLRVYVTVVKE
CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
ELSNDATAVFRRYFLSDAANQTDSVMEWECESAFCPLSIVQQPPLNGTKIAMWTYLQTGM
HHCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCEEEEEEHHHCCC
SVQTYDSGLLEASHNGYRHLWGGGAFNKAANSEYQTRLLLNDYVMQLMGQRCTLASHCVR
EEEECCCCCEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
TWFFVQNVDVNYAGVVKARKEVFITQNLTEKTHYIASTGIEGRHADPSVLVQMDSYAVDG
HHHEEEECCCCHHHHHHHHHHEEEECCCCHHHHHHEECCCCCCCCCCEEEEEECCEECCC
LEPGQIQFLYAPTHLNPTYEYGVTFERGTAVTYGDRKQVFISGTASIDNRGEIVYPGDIV
CCCCCEEEEEECCCCCCCEEECEEEECCCEEEECCCEEEEEEEECCCCCCCCEEECHHHH
KQTERMMENISVLLKEADATTRDITQAISYLRDMADYAVVKKYFEAHYPDLPHLIVLAPV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
CRPGWLIETECIAVVPTESSFKPL
CCCCEEEECCEEEEEECCCCCCCC
>Mature Secondary Structure
MMNYTRRIDTDKAVEMQISSFTGKGGTTEYQVMVSITDPCLSFVEQLQNLLRVYVTVVKE
CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
ELSNDATAVFRRYFLSDAANQTDSVMEWECESAFCPLSIVQQPPLNGTKIAMWTYLQTGM
HHCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCEEEEEEHHHCCC
SVQTYDSGLLEASHNGYRHLWGGGAFNKAANSEYQTRLLLNDYVMQLMGQRCTLASHCVR
EEEECCCCCEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
TWFFVQNVDVNYAGVVKARKEVFITQNLTEKTHYIASTGIEGRHADPSVLVQMDSYAVDG
HHHEEEECCCCHHHHHHHHHHEEEECCCCHHHHHHEECCCCCCCCCCEEEEEECCEECCC
LEPGQIQFLYAPTHLNPTYEYGVTFERGTAVTYGDRKQVFISGTASIDNRGEIVYPGDIV
CCCCCEEEEEECCCCCCCEEECEEEECCCEEEECCCEEEEEEEECCCCCCCCEEECHHHH
KQTERMMENISVLLKEADATTRDITQAISYLRDMADYAVVKKYFEAHYPDLPHLIVLAPV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
CRPGWLIETECIAVVPTESSFKPL
CCCCEEEECCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA