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The map label for this gene is ygeK [C]

Identifier: 150009195

GI number: 150009195

Start: 3074049

End: 3074660

Strand: Reverse

Name: ygeK [C]

Synonym: BDI_2597

Alternate gene names: 150009195

Gene position: 3074660-3074049 (Counterclockwise)

Preceding gene: 150009196

Following gene: 150009194

Centisome position: 63.9

GC content: 45.92

Gene sequence:

>612_bases
ATGAGTACAAATCTAAAGATTGCGATAGCCGAACCTTCTGTTATCATAAGGAGCGGACTGGAGAACCTGTTGAAACGGTT
ACCGGGTTTCCGTATCCAGATGGTGGAGATTCATTCGGTGGAATCTCTTTTCGACTCGCTTCGTATGCACAAACCGGATG
TGTTGATCGTGAATCCGGCTTTGCCCGGCTATTTCACGTTGCAACATTTGAAGGAGGAAAGCGGCTGTGCCGAGATGAAA
TGTATCGCTTTATTATATTCTGTCTCAGACAGTGTGTTATTGCGTTCTTATGATGAACAAATTAACATATACGATAGCCC
TGATGAGATCAAGCACAAATTGGAACGGTTGAACGCCGAGGTACTTCCGGATGACGAGCCGGAAGGGGATGACGAGCAAC
AATCGTTAAGCTCGAGGGAAAAAGAGATCGTAGTCTGCGTCGTGAAGGGAATGACAAACCGGGAGATAGCGGATCGTTTG
TTTCTTTCTACGCATACGGTCATCACCCACCGCCGTAATATCGCTCGGAAACTTCAAATTCATAGTGCCAGCGGTCTTAC
GATCTATGCGATTGTCAATAAGCTGGTCGAATTAGGCGACATTAAACAGTAA

Upstream 100 bases:

>100_bases
TTTGCCACGGAGGAAGACTTGGCTTCACATACCCGTGTGGAGGATTATTTGTTTGTACCGGCCATATTGGCTTTGGAAAA
ACAATTATAAGCATGAATCG

Downstream 100 bases:

>100_bases
TCGTATATTTATAAGTAAGTTAAAGGGAATGTGGATAAGCGATAAAAGCGCCTTCCGCATTCCCTTTACTATTAATATAA
TTAAATTTAATGATCATATC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; LuxR Family Transcriptional Regulator; Transcriptional Regulator LuxR Family; Two Component LuxR Family Transcriptional Regulator; Two-Component Response Regulator; Two-Component System Response Regulator; Two Component Transcriptional Regulator Luxr Family; 6-Phosphogluconate Dehydrogenase; Two Component Transcriptional Regulator LuxR Family

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSTNLKIAIAEPSVIIRSGLENLLKRLPGFRIQMVEIHSVESLFDSLRMHKPDVLIVNPALPGYFTLQHLKEESGCAEMK
CIALLYSVSDSVLLRSYDEQINIYDSPDEIKHKLERLNAEVLPDDEPEGDDEQQSLSSREKEIVVCVVKGMTNREIADRL
FLSTHTVITHRRNIARKLQIHSASGLTIYAIVNKLVELGDIKQ

Sequences:

>Translated_203_residues
MSTNLKIAIAEPSVIIRSGLENLLKRLPGFRIQMVEIHSVESLFDSLRMHKPDVLIVNPALPGYFTLQHLKEESGCAEMK
CIALLYSVSDSVLLRSYDEQINIYDSPDEIKHKLERLNAEVLPDDEPEGDDEQQSLSSREKEIVVCVVKGMTNREIADRL
FLSTHTVITHRRNIARKLQIHSASGLTIYAIVNKLVELGDIKQ
>Mature_202_residues
STNLKIAIAEPSVIIRSGLENLLKRLPGFRIQMVEIHSVESLFDSLRMHKPDVLIVNPALPGYFTLQHLKEESGCAEMKC
IALLYSVSDSVLLRSYDEQINIYDSPDEIKHKLERLNAEVLPDDEPEGDDEQQSLSSREKEIVVCVVKGMTNREIADRLF
LSTHTVITHRRNIARKLQIHSASGLTIYAIVNKLVELGDIKQ

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22961; Mature: 22830

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNLKIAIAEPSVIIRSGLENLLKRLPGFRIQMVEIHSVESLFDSLRMHKPDVLIVNPA
CCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEECCC
LPGYFTLQHLKEESGCAEMKCIALLYSVSDSVLLRSYDEQINIYDSPDEIKHKLERLNAE
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCHHHHHHHHHHCCCC
VLPDDEPEGDDEQQSLSSREKEIVVCVVKGMTNREIADRLFLSTHTVITHRRNIARKLQI
CCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
HSASGLTIYAIVNKLVELGDIKQ
ECCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STNLKIAIAEPSVIIRSGLENLLKRLPGFRIQMVEIHSVESLFDSLRMHKPDVLIVNPA
CCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEECCC
LPGYFTLQHLKEESGCAEMKCIALLYSVSDSVLLRSYDEQINIYDSPDEIKHKLERLNAE
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCHHHHHHHHHHCCCC
VLPDDEPEGDDEQQSLSSREKEIVVCVVKGMTNREIADRLFLSTHTVITHRRNIARKLQI
CCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
HSASGLTIYAIVNKLVELGDIKQ
ECCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA