| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009192
Identifier: 150009192
GI number: 150009192
Start: 3070714
End: 3071784
Strand: Direct
Name: 150009192
Synonym: BDI_2594
Alternate gene names: NA
Gene position: 3070714-3071784 (Clockwise)
Preceding gene: 150009189
Following gene: 150009206
Centisome position: 63.82
GC content: 48.55
Gene sequence:
>1071_bases ATGAAGACATTAACAATCGGAGACCTAAAGGCTCGTATTCCAATCATCCAAGGTGGAATGGGCGTAGGCATCTCTCTTTC CGGCTTAGCCTCGGCCGTTGCAAATGAAGGTGGGATCGGCGTTATCTCCGCAGCCGGTCTCGGACTTTTATATAAGAAAT TGTCACCCAGCAATTATACGGAAGCTGGGAATCTCGGGTTAGCGGAAGAGATCCGCAAGGCCCGGGAAAAAGCGAAAGGT ATCATCGGCGTAAACGTAATGGTGGCTCTTTCCGACTTCGCCGAATTGGTGAAAACCAGTATAGCGGAAAAGGTAGACAT CATTTTCAGCGGTGCCGGACTGCCTTTGGACTTGCCTTCTTTCCTCAAGAAAGATAGCGTCACCAAGCTGGTTCCCATCG TTTCCAGCGCACGTGCCGTACGCATCATCTGCGAGAAATGGAAGAATAACTATGATTATCTTCCGGATGCGGTGGTACTA GAAGGCCCGAAAGCGGGTGGACATCTGGGATATAAGGAAAACCAGTTGGAAGACCAGCATTTCTCATTGGAAGAATTATT ACCTCAAGTCGTAGAGGAAGTCTCTCATTTCGAGCAGAAATACGACAAAAAGATCCCGGTAATTGCGGCAGGAGGCATTT ATACGGGTGAAGATATCAAACGCATGATAGACCTTGGAGCATCAGGCGTTCAGTTAGGAACCCGGTTCGTTACCACCACG GAATGCGATGCCTCGGAAGCCTTCAAACAGACCTATATACAGGCAGAGGAGAAGGACATAGAGATCATCAAAAGTCCCGT CGGCATGCCCGGACGAGCCATCCATTGCAGTTTCCTTGAGAAAGTGAAGGCGGGAATCAAGCAACCGAAAGCTTGTCCCT TCAACTGTATCAAGACGTGCGATATATCACGCAGCCCGTATTGTATCGTCACCGCCTTGTACAACGCCTTCAAAGGGAAT TTCGAGAATGGATACGCTTTCGCCGGCAGTAACGCTTGGCGAGCGAATAAGATCACTTCGGTACGGGAAACCATTACCGA GTTGATGAATGAATGGAAAGCTAAATTATAA
Upstream 100 bases:
>100_bases ACTAGAATATTTGCGCGATAATTCTGGTCCATTTCGCACATTTATTGGGATATTGTGCTACCTTTGCCTCGATTATTGAA ACACTATATTTATTTTTTTA
Downstream 100 bases:
>100_bases GCACAAAAAAAGCCTCCGGAAACGGGGGCTTTTTTTATATTCGAAGGTAAGTATCTCCATTATTGCTCGGCCAACCAAGC GGCCAGCTCATCCCGGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKTLTIGDLKARIPIIQGGMGVGISLSGLASAVANEGGIGVISAAGLGLLYKKLSPSNYTEAGNLGLAEEIRKAREKAKG IIGVNVMVALSDFAELVKTSIAEKVDIIFSGAGLPLDLPSFLKKDSVTKLVPIVSSARAVRIICEKWKNNYDYLPDAVVL EGPKAGGHLGYKENQLEDQHFSLEELLPQVVEEVSHFEQKYDKKIPVIAAGGIYTGEDIKRMIDLGASGVQLGTRFVTTT ECDASEAFKQTYIQAEEKDIEIIKSPVGMPGRAIHCSFLEKVKAGIKQPKACPFNCIKTCDISRSPYCIVTALYNAFKGN FENGYAFAGSNAWRANKITSVRETITELMNEWKAKL
Sequences:
>Translated_356_residues MKTLTIGDLKARIPIIQGGMGVGISLSGLASAVANEGGIGVISAAGLGLLYKKLSPSNYTEAGNLGLAEEIRKAREKAKG IIGVNVMVALSDFAELVKTSIAEKVDIIFSGAGLPLDLPSFLKKDSVTKLVPIVSSARAVRIICEKWKNNYDYLPDAVVL EGPKAGGHLGYKENQLEDQHFSLEELLPQVVEEVSHFEQKYDKKIPVIAAGGIYTGEDIKRMIDLGASGVQLGTRFVTTT ECDASEAFKQTYIQAEEKDIEIIKSPVGMPGRAIHCSFLEKVKAGIKQPKACPFNCIKTCDISRSPYCIVTALYNAFKGN FENGYAFAGSNAWRANKITSVRETITELMNEWKAKL >Mature_356_residues MKTLTIGDLKARIPIIQGGMGVGISLSGLASAVANEGGIGVISAAGLGLLYKKLSPSNYTEAGNLGLAEEIRKAREKAKG IIGVNVMVALSDFAELVKTSIAEKVDIIFSGAGLPLDLPSFLKKDSVTKLVPIVSSARAVRIICEKWKNNYDYLPDAVVL EGPKAGGHLGYKENQLEDQHFSLEELLPQVVEEVSHFEQKYDKKIPVIAAGGIYTGEDIKRMIDLGASGVQLGTRFVTTT ECDASEAFKQTYIQAEEKDIEIIKSPVGMPGRAIHCSFLEKVKAGIKQPKACPFNCIKTCDISRSPYCIVTALYNAFKGN FENGYAFAGSNAWRANKITSVRETITELMNEWKAKL
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=210, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 38538; Mature: 38538
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLTIGDLKARIPIIQGGMGVGISLSGLASAVANEGGIGVISAAGLGLLYKKLSPSNYT CCCEEECCHHHCCCEEECCCCCCEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCC EAGNLGLAEEIRKAREKAKGIIGVNVMVALSDFAELVKTSIAEKVDIIFSGAGLPLDLPS CCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHH FLKKDSVTKLVPIVSSARAVRIICEKWKNNYDYLPDAVVLEGPKAGGHLGYKENQLEDQH HHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC FSLEELLPQVVEEVSHFEQKYDKKIPVIAAGGIYTGEDIKRMIDLGASGVQLGTRFVTTT CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEECHHHHHHHHHCCCCCHHHCCEEEEEC ECDASEAFKQTYIQAEEKDIEIIKSPVGMPGRAIHCSFLEKVKAGIKQPKACPFNCIKTC CCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHC DISRSPYCIVTALYNAFKGNFENGYAFAGSNAWRANKITSVRETITELMNEWKAKL CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTLTIGDLKARIPIIQGGMGVGISLSGLASAVANEGGIGVISAAGLGLLYKKLSPSNYT CCCEEECCHHHCCCEEECCCCCCEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCC EAGNLGLAEEIRKAREKAKGIIGVNVMVALSDFAELVKTSIAEKVDIIFSGAGLPLDLPS CCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHH FLKKDSVTKLVPIVSSARAVRIICEKWKNNYDYLPDAVVLEGPKAGGHLGYKENQLEDQH HHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC FSLEELLPQVVEEVSHFEQKYDKKIPVIAAGGIYTGEDIKRMIDLGASGVQLGTRFVTTT CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEECHHHHHHHHHCCCCCHHHCCEEEEEC ECDASEAFKQTYIQAEEKDIEIIKSPVGMPGRAIHCSFLEKVKAGIKQPKACPFNCIKTC CCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHC DISRSPYCIVTALYNAFKGNFENGYAFAGSNAWRANKITSVRETITELMNEWKAKL CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA