| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is luxQ [H]
Identifier: 150009171
GI number: 150009171
Start: 3045048
End: 3047357
Strand: Direct
Name: luxQ [H]
Synonym: BDI_2573
Alternate gene names: 150009171
Gene position: 3045048-3047357 (Clockwise)
Preceding gene: 150009165
Following gene: 150009177
Centisome position: 63.29
GC content: 47.58
Gene sequence:
>2310_bases ATGAGAAATATCATTCTTTTTATTTTTATTATACTAACGGTCCACTTGAACATGAGCGCACGAGGCTCCGGCGAGAAACC GTCTATAGTCGTACTGCACTCCATCAACTTCGAGGAAAGCTGGACGAAACAGACCTATCTTGATATAGAAAGAAAATTCG GGGAGGAAGGGTTTACCGTAAAGGCGATTCCCTTACAGATCCCCGGTATCCGCACTATGGAAGGGTTTCAAGAGAAGAGA ACAATGATCCTAGAGAGAGTTCCCGTGCCACCCACCTTAGTCGTATGCATAGGAGATCCCTCTTGGCTTGTCGCCCGCCC GTTGTTTGACAAGGAATGGAAAGATATTCCCTCTATCATCTGCTACGCCAGAGATTATATGTACCCGAAAGAAGAGTACC TGATAGACCTAGATAAAAACGTGCTCGATACGCTGGTTCCCATCACGGACGTAGTAAAAGGCTATAACGCCACTTTTATA AAATACCCAGTCTATATCAAGCAAACGATCGAGCTAATCAAAAAGCTACAACCGGAATTAACCAAACTGGCCTTTATTTT TGACCGCCGTTATATAAGCCAGCAAACGAAAGCGGATGTAGAGGCCGTGCTACGGAAAGATTTTCCGGGCATCCAATTCG AGCCACTGTCTACCACCTCCATTTCCACCGAGAACTTATTGGACAGACTGGCCTCTTTCGACAATAAGACCGGAGTCCTT TATTACTCATGGTACAGGACCCGGAAGGATAACGAGAATCGTTACCTAGTCGATAACGTCCAGAAAATGACCAATAGTTT CTCCGTCCCCCCAATCTTTACCTTGCAAGACGTACAAACAGAAAACGGGAATTTCGCCGGGGGATATTATGTTTCTCCGG AGGATTATGCGCAGGTGACGGTCAACACGATCGAAATGATCCTCTCGGGGAAAGATAGTAAGGAAATCCCGATCCAGACC GCGGAAACCCCGAGGGCCTACCTAAATTACCAGCATCTATTGCTTCACCAGATCGATCCCGGCCTATATCCCCCGAACGC CACGTATTTCCAAGAGCCTCCCGGTTTCTTACAGAAATACAAGATCCATATCATAAGCCTACTCGTCATTCTGGCGTTAT TGATAACGATCGGGATCTTACGGGTCCGCCTCTTCATCCAAAAGCAAAAGGCCAAAGACAAGGAGCTGCAAATCGCACGC CAAGCGCAAGACCTGAACCAGAAATACCAGCTCGTCTTGAAAGCCAGCAACATGATGACATGGATATGGGACGTAAAAGA AGCACGGCTCGAATGTAACAATATTTACCTGACCCAAAGATCCATTCGCGACAAGGGAATCGACGGCCTATTCAGCATGT CGGCGGACGAGTTTTATAGCGGCATTCACCCCGAGGACTTGGAACAGATGCAAGACGCTATCAATAAACTAATCGCCGGC GAGAGCATATCGATCGACGAGGAGATCCGTTATTTAGACGATACAGGGCTTGAATATACATGGATAGAGATCTTTGCGAT CGTAGGGAAAACCGATCCGGAAGGAAAATCCGCCTACTTAACCGGAGGTACTACCCTCATCAACCAACGGAAAAAAATGG AACAAGAACTGAGGGACAAGGAGAAGATAGAGGAATCCAACCGGTTGAAATCCGCCTTCCTAGCGAACATGAGCCACGAG ATACGTACCCCGCTGAACGCTATCGTAGGCTTTTCCAACCTGCTAGCGGAAACTTGCCACTCCGAGGAGACGAGAGAGTT CTGCGAGATCATCGAGACGAACAACGAGCTTCTCCTTCAACTCGTGAACGATATCCTGGACCTATCGAAGATCGAGGCCG GGCAAATGGATTTCATCTATTCCGAGTTCAACGTATCCACGCTATTCCGGAGCTTATACCAGACCTTCCAAAGCCGGGTG AAAGACGGTGTCACTCTCTATTGCGAGATACCTGAACAGGATTGCGTTATCTATTCCGAGAAGAATCGCTTGACCCAAGT GATCACCAACTTCCTCACGAACGCCTGTAAGTTCACGTTCCAAGGGTCTATCCGCATGGGATACAAGGAGAGGGAAGATG GATTATACTTTTACGTAAAAGATACCGGAAAAGGTATTGAGCGGAAGAACCTCCCGCACGTATTCGAGCGTTTCGCCAAA TTCGATTCCTTTATCCAAGGAACCGGACTCGGACTATCCATTTGCCAAACGATCCTAGAGAATCTTCACGGGAAGATCGG CGTAGAGTCGGAAGAAGGAAAAGGGAGTACTTTCTGGTTTACGATCCCATGCGCTGTATCAAGACCGTAG
Upstream 100 bases:
>100_bases AACCTTTATTTTCAGGCAAACCTCTTGCTTAATAAAGCGGAATCACTACATTTGCTACCAGAATCACGTTTGCTACATAT ATCGCTTAGAATTAACGGCC
Downstream 100 bases:
>100_bases CGTAAGCCGAGATCCCTTCCTGCCGTCCGGTGAAGCCCAGCTTCTCCGTGGTCGTAGCCTTGATAGAGATATCCTCCTCG TCCACGTTCATGACCTCGGC
Product: two-component system sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 769; Mature: 769
Protein sequence:
>769_residues MRNIILFIFIILTVHLNMSARGSGEKPSIVVLHSINFEESWTKQTYLDIERKFGEEGFTVKAIPLQIPGIRTMEGFQEKR TMILERVPVPPTLVVCIGDPSWLVARPLFDKEWKDIPSIICYARDYMYPKEEYLIDLDKNVLDTLVPITDVVKGYNATFI KYPVYIKQTIELIKKLQPELTKLAFIFDRRYISQQTKADVEAVLRKDFPGIQFEPLSTTSISTENLLDRLASFDNKTGVL YYSWYRTRKDNENRYLVDNVQKMTNSFSVPPIFTLQDVQTENGNFAGGYYVSPEDYAQVTVNTIEMILSGKDSKEIPIQT AETPRAYLNYQHLLLHQIDPGLYPPNATYFQEPPGFLQKYKIHIISLLVILALLITIGILRVRLFIQKQKAKDKELQIAR QAQDLNQKYQLVLKASNMMTWIWDVKEARLECNNIYLTQRSIRDKGIDGLFSMSADEFYSGIHPEDLEQMQDAINKLIAG ESISIDEEIRYLDDTGLEYTWIEIFAIVGKTDPEGKSAYLTGGTTLINQRKKMEQELRDKEKIEESNRLKSAFLANMSHE IRTPLNAIVGFSNLLAETCHSEETREFCEIIETNNELLLQLVNDILDLSKIEAGQMDFIYSEFNVSTLFRSLYQTFQSRV KDGVTLYCEIPEQDCVIYSEKNRLTQVITNFLTNACKFTFQGSIRMGYKEREDGLYFYVKDTGKGIERKNLPHVFERFAK FDSFIQGTGLGLSICQTILENLHGKIGVESEEGKGSTFWFTIPCAVSRP
Sequences:
>Translated_769_residues MRNIILFIFIILTVHLNMSARGSGEKPSIVVLHSINFEESWTKQTYLDIERKFGEEGFTVKAIPLQIPGIRTMEGFQEKR TMILERVPVPPTLVVCIGDPSWLVARPLFDKEWKDIPSIICYARDYMYPKEEYLIDLDKNVLDTLVPITDVVKGYNATFI KYPVYIKQTIELIKKLQPELTKLAFIFDRRYISQQTKADVEAVLRKDFPGIQFEPLSTTSISTENLLDRLASFDNKTGVL YYSWYRTRKDNENRYLVDNVQKMTNSFSVPPIFTLQDVQTENGNFAGGYYVSPEDYAQVTVNTIEMILSGKDSKEIPIQT AETPRAYLNYQHLLLHQIDPGLYPPNATYFQEPPGFLQKYKIHIISLLVILALLITIGILRVRLFIQKQKAKDKELQIAR QAQDLNQKYQLVLKASNMMTWIWDVKEARLECNNIYLTQRSIRDKGIDGLFSMSADEFYSGIHPEDLEQMQDAINKLIAG ESISIDEEIRYLDDTGLEYTWIEIFAIVGKTDPEGKSAYLTGGTTLINQRKKMEQELRDKEKIEESNRLKSAFLANMSHE IRTPLNAIVGFSNLLAETCHSEETREFCEIIETNNELLLQLVNDILDLSKIEAGQMDFIYSEFNVSTLFRSLYQTFQSRV KDGVTLYCEIPEQDCVIYSEKNRLTQVITNFLTNACKFTFQGSIRMGYKEREDGLYFYVKDTGKGIERKNLPHVFERFAK FDSFIQGTGLGLSICQTILENLHGKIGVESEEGKGSTFWFTIPCAVSRP >Mature_769_residues MRNIILFIFIILTVHLNMSARGSGEKPSIVVLHSINFEESWTKQTYLDIERKFGEEGFTVKAIPLQIPGIRTMEGFQEKR TMILERVPVPPTLVVCIGDPSWLVARPLFDKEWKDIPSIICYARDYMYPKEEYLIDLDKNVLDTLVPITDVVKGYNATFI KYPVYIKQTIELIKKLQPELTKLAFIFDRRYISQQTKADVEAVLRKDFPGIQFEPLSTTSISTENLLDRLASFDNKTGVL YYSWYRTRKDNENRYLVDNVQKMTNSFSVPPIFTLQDVQTENGNFAGGYYVSPEDYAQVTVNTIEMILSGKDSKEIPIQT AETPRAYLNYQHLLLHQIDPGLYPPNATYFQEPPGFLQKYKIHIISLLVILALLITIGILRVRLFIQKQKAKDKELQIAR QAQDLNQKYQLVLKASNMMTWIWDVKEARLECNNIYLTQRSIRDKGIDGLFSMSADEFYSGIHPEDLEQMQDAINKLIAG ESISIDEEIRYLDDTGLEYTWIEIFAIVGKTDPEGKSAYLTGGTTLINQRKKMEQELRDKEKIEESNRLKSAFLANMSHE IRTPLNAIVGFSNLLAETCHSEETREFCEIIETNNELLLQLVNDILDLSKIEAGQMDFIYSEFNVSTLFRSLYQTFQSRV KDGVTLYCEIPEQDCVIYSEKNRLTQVITNFLTNACKFTFQGSIRMGYKEREDGLYFYVKDTGKGIERKNLPHVFERFAK FDSFIQGTGLGLSICQTILENLHGKIGVESEEGKGSTFWFTIPCAVSRP
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=35.655737704918, Blast_Score=142, Evalue=1e-34, Organism=Escherichia coli, GI1789149, Length=235, Percent_Identity=37.4468085106383, Blast_Score=139, Evalue=7e-34, Organism=Escherichia coli, GI87081816, Length=234, Percent_Identity=36.3247863247863, Blast_Score=132, Evalue=8e-32, Organism=Escherichia coli, GI1788713, Length=286, Percent_Identity=29.3706293706294, Blast_Score=131, Evalue=2e-31, Organism=Escherichia coli, GI48994928, Length=263, Percent_Identity=32.6996197718631, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=29.7959183673469, Blast_Score=103, Evalue=6e-23, Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=28.448275862069, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1786912, Length=224, Percent_Identity=26.7857142857143, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1788393, Length=210, Percent_Identity=25.7142857142857, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1786783, Length=237, Percent_Identity=27.0042194092827, Blast_Score=80, Evalue=6e-16, Organism=Escherichia coli, GI1788549, Length=241, Percent_Identity=24.4813278008299, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790861, Length=230, Percent_Identity=26.0869565217391, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1790346, Length=241, Percent_Identity=24.896265560166, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1790551, Length=227, Percent_Identity=25.9911894273128, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 88520; Mature: 88520
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIILFIFIILTVHLNMSARGSGEKPSIVVLHSINFEESWTKQTYLDIERKFGEEGFTV CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEE KAIPLQIPGIRTMEGFQEKRTMILERVPVPPTLVVCIGDPSWLVARPLFDKEWKDIPSII EEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHH CYARDYMYPKEEYLIDLDKNVLDTLVPITDVVKGYNATFIKYPVYIKQTIELIKKLQPEL HHHHHCCCCCHHHEEECCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCHHH TKLAFIFDRRYISQQTKADVEAVLRKDFPGIQFEPLSTTSISTENLLDRLASFDNKTGVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCEE YYSWYRTRKDNENRYLVDNVQKMTNSFSVPPIFTLQDVQTENGNFAGGYYVSPEDYAQVT EEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEECCCCHHHHH VNTIEMILSGKDSKEIPIQTAETPRAYLNYQHLLLHQIDPGLYPPNATYFQEPPGFLQKY HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH KIHIISLLVILALLITIGILRVRLFIQKQKAKDKELQIARQAQDLNQKYQLVLKASNMMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHEEEEEECCCEE WIWDVKEARLECNNIYLTQRSIRDKGIDGLFSMSADEFYSGIHPEDLEQMQDAINKLIAG EEEEHHHHHHCCCEEEEEHHHHHHCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCC ESISIDEEIRYLDDTGLEYTWIEIFAIVGKTDPEGKSAYLTGGTTLINQRKKMEQELRDK CCCCCHHHHHHHCCCCCCEEHEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH EKIEESNRLKSAFLANMSHEIRTPLNAIVGFSNLLAETCHSEETREFCEIIETNNELLLQ HHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH LVNDILDLSKIEAGQMDFIYSEFNVSTLFRSLYQTFQSRVKDGVTLYCEIPEQDCVIYSE HHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEC KNRLTQVITNFLTNACKFTFQGSIRMGYKEREDGLYFYVKDTGKGIERKNLPHVFERFAK HHHHHHHHHHHHHHHHEEEEECCEEECCEECCCCEEEEEECCCCCCCCCCCHHHHHHHHH FDSFIQGTGLGLSICQTILENLHGKIGVESEEGKGSTFWFTIPCAVSRP HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCC >Mature Secondary Structure MRNIILFIFIILTVHLNMSARGSGEKPSIVVLHSINFEESWTKQTYLDIERKFGEEGFTV CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEE KAIPLQIPGIRTMEGFQEKRTMILERVPVPPTLVVCIGDPSWLVARPLFDKEWKDIPSII EEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHH CYARDYMYPKEEYLIDLDKNVLDTLVPITDVVKGYNATFIKYPVYIKQTIELIKKLQPEL HHHHHCCCCCHHHEEECCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCHHH TKLAFIFDRRYISQQTKADVEAVLRKDFPGIQFEPLSTTSISTENLLDRLASFDNKTGVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCEE YYSWYRTRKDNENRYLVDNVQKMTNSFSVPPIFTLQDVQTENGNFAGGYYVSPEDYAQVT EEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEECCCCHHHHH VNTIEMILSGKDSKEIPIQTAETPRAYLNYQHLLLHQIDPGLYPPNATYFQEPPGFLQKY HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH KIHIISLLVILALLITIGILRVRLFIQKQKAKDKELQIARQAQDLNQKYQLVLKASNMMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHEEEEEECCCEE WIWDVKEARLECNNIYLTQRSIRDKGIDGLFSMSADEFYSGIHPEDLEQMQDAINKLIAG EEEEHHHHHHCCCEEEEEHHHHHHCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCC ESISIDEEIRYLDDTGLEYTWIEIFAIVGKTDPEGKSAYLTGGTTLINQRKKMEQELRDK CCCCCHHHHHHHCCCCCCEEHEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH EKIEESNRLKSAFLANMSHEIRTPLNAIVGFSNLLAETCHSEETREFCEIIETNNELLLQ HHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH LVNDILDLSKIEAGQMDFIYSEFNVSTLFRSLYQTFQSRVKDGVTLYCEIPEQDCVIYSE HHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEC KNRLTQVITNFLTNACKFTFQGSIRMGYKEREDGLYFYVKDTGKGIERKNLPHVFERFAK HHHHHHHHHHHHHHHHEEEEECCEEECCEECCCCEEEEEECCCCCCCCCCCHHHHHHHHH FDSFIQGTGLGLSICQTILENLHGKIGVESEEGKGSTFWFTIPCAVSRP HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA