| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009146
Identifier: 150009146
GI number: 150009146
Start: 3015450
End: 3017276
Strand: Reverse
Name: 150009146
Synonym: BDI_2548
Alternate gene names: NA
Gene position: 3017276-3015450 (Counterclockwise)
Preceding gene: 150009147
Following gene: 150009141
Centisome position: 62.71
GC content: 49.15
Gene sequence:
>1827_bases ATGAAAAGAATCAAATCTATAGTATGCGGTACGGTAGGTGCATTGGGGCTGTTGGCGATGACATCTTGCACGGACTTGAC CGAGACGATATATTCGGACTTGACGAAAGACAACTATTATACGGATAAGGCTTCGGTAGAGGCGGCCGTGGTGCGATGCT TTGAACATAGTGATAACGTGACATGGCGTGGTGACATCTGGAAATTACAGGAGCTTACCGCTGATCATTTCGTATGGACG CAAAAGGGTCGCCATGGGTATGACGATGGTATGTGGATTCGTTTGCATGAGCACAAATGGAATTATATCCAGGCGCAGAT CAATGGAGGGTGGGTACAGTCGTACCAGTGTATCAGCCAGGTGAATACCGTATTGCGCGACTTCAATACGTTAGATTTCA GTTCGATCGGTGTGACCGATGAGGAGAAAGCCGCTTATTTCAGTGATTTACGTGTGTTGCGGGCTTGGTACTACATGTTC TTGCTGGATTTCTTCCGCGAGGTGCCTATCGCTACTGAGCAGCAGGGTGCGGAGGAGATCGTTGCGCAAAGCCCGGCTAA GGATGTGTTCAATTTTATCGAGTCTGAATTGAAGGATGCGCTTCCTTCCTTACCTAAGGAGAAACGTATCGGTCGTTGGA CGCAAGGCCCTGCGGCAGGTTTGCTAGTTCGCTTGTACTTGAACGCGAAGGTTTGGGTTGGAGAGGATCGTATGGCCGAC TGTAAGAAGTATGCGCAGGATATCATCAATGGCGTGTATGGATCCTATAGCATCAATCAGTCTGATTACCGTGATCCGTT CCGTTCGGGTATCAATGGCTACCAGTCTCCTGAGAACTTGTTTGAGTTCTGGCACGAGCGCGGTCGTTTGGAGCAACAGA CGATGTGGGCAGACGGAATGCACTATTCCGCAGCTCAGACGATAGGTAGCGATGGAGGAGGTAACAACGGTATTCACTTG CAACCTTCCCGCGATTTCCAAGGAAACGTGTACCAATTCGCCAGCGGGTTGGGTAATCCGTTCGAAAAATACGCTAAGTG TGATTACCGCGTGATTCCGTTCCATACCACCGATGCAAATGGCGGTTATGAGGGCTTCTTCTTGCAAGGCATGCAAATGC AGTACGACAAGTCCAAACAATATGGTTTCACGGATCAGTACGTGAACGGCTCTGAGGAATATGCCGGTGTTCCTTTGGTA TTCGTAGACCAAGTCGGTCGTTTCTCCGAGCAAGCAGAGTTGAAGAAGAAAGACGGTGAGAGCGATGAGGCTTATAAGGC TCGTTTTATCACTTACATGAAGGAGGTGGCCGAGCGTGGTTATTTCATTTGCAATGACGCGGATGTGATCGCTAAGAAGT CGCAGGTTACGACCGGTGAGGAGAATTCCGGTATCCGTTTCAACAAATTCCCTTATTTGCCAGATCACGACGGGTTATTC CGTTCTCAATCCACGCCGGAGATGCGTTTGGCCGAGATCTACTACTCCTTGGCTGAATGTTATTACAGAGAAGGAAATAA GGCGAAAGCCGCTGAATTACTGGATTATGTGCGCATTAGAAACTATCCCACCGAGGAATGGAGCAAGTACAGTTATGTAG CTAATCCTGCCAAACTGACCGATGCGGAATTCTTGGATGAGTGGGGACGCGAGTTCTTGGGCGAGCGTCGCCGTCGCGTG GACTTGATCCGTTGGGGTAAGTTCGGTGAGGCTTGGTGGAATAAGGAGAAAGATCCTTCCGATAAGGAATATACTTATTT CCCGATCCCGCAGAACCAGTTGAATGCAAGTCCTGTCTTGAAACAGACTACCCCAGGCTGGGAGTAA
Upstream 100 bases:
>100_bases GTTTGTGGCCGGGCATTGGTGGCATGGATGTATATCCGACCGCACGTAACCTGACGTTTGGTGTACAAATTACTTATTAA TCTTAATCAAAGAAATAGAC
Downstream 100 bases:
>100_bases ATTAAGTTTAGTATTGAAAAGTAGGGGAGGAGCTTGCCGGAAACTTCAGACGTTGTTCGGACGTTGTACCGGCACTTCCT TTCTGCTATAAAACAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MKRIKSIVCGTVGALGLLAMTSCTDLTETIYSDLTKDNYYTDKASVEAAVVRCFEHSDNVTWRGDIWKLQELTADHFVWT QKGRHGYDDGMWIRLHEHKWNYIQAQINGGWVQSYQCISQVNTVLRDFNTLDFSSIGVTDEEKAAYFSDLRVLRAWYYMF LLDFFREVPIATEQQGAEEIVAQSPAKDVFNFIESELKDALPSLPKEKRIGRWTQGPAAGLLVRLYLNAKVWVGEDRMAD CKKYAQDIINGVYGSYSINQSDYRDPFRSGINGYQSPENLFEFWHERGRLEQQTMWADGMHYSAAQTIGSDGGGNNGIHL QPSRDFQGNVYQFASGLGNPFEKYAKCDYRVIPFHTTDANGGYEGFFLQGMQMQYDKSKQYGFTDQYVNGSEEYAGVPLV FVDQVGRFSEQAELKKKDGESDEAYKARFITYMKEVAERGYFICNDADVIAKKSQVTTGEENSGIRFNKFPYLPDHDGLF RSQSTPEMRLAEIYYSLAECYYREGNKAKAAELLDYVRIRNYPTEEWSKYSYVANPAKLTDAEFLDEWGREFLGERRRRV DLIRWGKFGEAWWNKEKDPSDKEYTYFPIPQNQLNASPVLKQTTPGWE
Sequences:
>Translated_608_residues MKRIKSIVCGTVGALGLLAMTSCTDLTETIYSDLTKDNYYTDKASVEAAVVRCFEHSDNVTWRGDIWKLQELTADHFVWT QKGRHGYDDGMWIRLHEHKWNYIQAQINGGWVQSYQCISQVNTVLRDFNTLDFSSIGVTDEEKAAYFSDLRVLRAWYYMF LLDFFREVPIATEQQGAEEIVAQSPAKDVFNFIESELKDALPSLPKEKRIGRWTQGPAAGLLVRLYLNAKVWVGEDRMAD CKKYAQDIINGVYGSYSINQSDYRDPFRSGINGYQSPENLFEFWHERGRLEQQTMWADGMHYSAAQTIGSDGGGNNGIHL QPSRDFQGNVYQFASGLGNPFEKYAKCDYRVIPFHTTDANGGYEGFFLQGMQMQYDKSKQYGFTDQYVNGSEEYAGVPLV FVDQVGRFSEQAELKKKDGESDEAYKARFITYMKEVAERGYFICNDADVIAKKSQVTTGEENSGIRFNKFPYLPDHDGLF RSQSTPEMRLAEIYYSLAECYYREGNKAKAAELLDYVRIRNYPTEEWSKYSYVANPAKLTDAEFLDEWGREFLGERRRRV DLIRWGKFGEAWWNKEKDPSDKEYTYFPIPQNQLNASPVLKQTTPGWE >Mature_608_residues MKRIKSIVCGTVGALGLLAMTSCTDLTETIYSDLTKDNYYTDKASVEAAVVRCFEHSDNVTWRGDIWKLQELTADHFVWT QKGRHGYDDGMWIRLHEHKWNYIQAQINGGWVQSYQCISQVNTVLRDFNTLDFSSIGVTDEEKAAYFSDLRVLRAWYYMF LLDFFREVPIATEQQGAEEIVAQSPAKDVFNFIESELKDALPSLPKEKRIGRWTQGPAAGLLVRLYLNAKVWVGEDRMAD CKKYAQDIINGVYGSYSINQSDYRDPFRSGINGYQSPENLFEFWHERGRLEQQTMWADGMHYSAAQTIGSDGGGNNGIHL QPSRDFQGNVYQFASGLGNPFEKYAKCDYRVIPFHTTDANGGYEGFFLQGMQMQYDKSKQYGFTDQYVNGSEEYAGVPLV FVDQVGRFSEQAELKKKDGESDEAYKARFITYMKEVAERGYFICNDADVIAKKSQVTTGEENSGIRFNKFPYLPDHDGLF RSQSTPEMRLAEIYYSLAECYYREGNKAKAAELLDYVRIRNYPTEEWSKYSYVANPAKLTDAEFLDEWGREFLGERRRRV DLIRWGKFGEAWWNKEKDPSDKEYTYFPIPQNQLNASPVLKQTTPGWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70131; Mature: 70131
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIKSIVCGTVGALGLLAMTSCTDLTETIYSDLTKDNYYTDKASVEAAVVRCFEHSDNV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC TWRGDIWKLQELTADHFVWTQKGRHGYDDGMWIRLHEHKWNYIQAQINGGWVQSYQCISQ EECCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHH VNTVLRDFNTLDFSSIGVTDEEKAAYFSDLRVLRAWYYMFLLDFFREVPIATEQQGAEEI HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VAQSPAKDVFNFIESELKDALPSLPKEKRIGRWTQGPAAGLLVRLYLNAKVWVGEDRMAD HHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHEEEEECCEEEECCCHHHH CKKYAQDIINGVYGSYSINQSDYRDPFRSGINGYQSPENLFEFWHERGRLEQQTMWADGM HHHHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCC HYSAAQTIGSDGGGNNGIHLQPSRDFQGNVYQFASGLGNPFEKYAKCDYRVIPFHTTDAN CHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCEEEEEEECCCC GGYEGFFLQGMQMQYDKSKQYGFTDQYVNGSEEYAGVPLVFVDQVGRFSEQAELKKKDGE CCCCCEEEECCHHHCCCCCCCCCCHHHCCCCHHHCCCCEEEHHHHCCHHHHHHHHHCCCC SDEAYKARFITYMKEVAERGYFICNDADVIAKKSQVTTGEENSGIRFNKFPYLPDHDGLF CCHHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC RSQSTPEMRLAEIYYSLAECYYREGNKAKAAELLDYVRIRNYPTEEWSKYSYVANPAKLT CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCEECCCHHHC DAEFLDEWGREFLGERRRRVDLIRWGKFGEAWWNKEKDPSDKEYTYFPIPQNQLNASPVL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC KQTTPGWE CCCCCCCC >Mature Secondary Structure MKRIKSIVCGTVGALGLLAMTSCTDLTETIYSDLTKDNYYTDKASVEAAVVRCFEHSDNV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC TWRGDIWKLQELTADHFVWTQKGRHGYDDGMWIRLHEHKWNYIQAQINGGWVQSYQCISQ EECCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHH VNTVLRDFNTLDFSSIGVTDEEKAAYFSDLRVLRAWYYMFLLDFFREVPIATEQQGAEEI HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VAQSPAKDVFNFIESELKDALPSLPKEKRIGRWTQGPAAGLLVRLYLNAKVWVGEDRMAD HHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHEEEEECCEEEECCCHHHH CKKYAQDIINGVYGSYSINQSDYRDPFRSGINGYQSPENLFEFWHERGRLEQQTMWADGM HHHHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCC HYSAAQTIGSDGGGNNGIHLQPSRDFQGNVYQFASGLGNPFEKYAKCDYRVIPFHTTDAN CHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCEEEEEEECCCC GGYEGFFLQGMQMQYDKSKQYGFTDQYVNGSEEYAGVPLVFVDQVGRFSEQAELKKKDGE CCCCCEEEECCHHHCCCCCCCCCCHHHCCCCHHHCCCCEEEHHHHCCHHHHHHHHHCCCC SDEAYKARFITYMKEVAERGYFICNDADVIAKKSQVTTGEENSGIRFNKFPYLPDHDGLF CCHHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC RSQSTPEMRLAEIYYSLAECYYREGNKAKAAELLDYVRIRNYPTEEWSKYSYVANPAKLT CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCEECCCHHHC DAEFLDEWGREFLGERRRRVDLIRWGKFGEAWWNKEKDPSDKEYTYFPIPQNQLNASPVL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC KQTTPGWE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA