Click here to switch to the map view.

The map label for this gene is 150009131

Identifier: 150009131

GI number: 150009131

Start: 3001019

End: 3002287

Strand: Direct

Name: 150009131

Synonym: BDI_2532

Alternate gene names: NA

Gene position: 3001019-3002287 (Clockwise)

Preceding gene: 150009129

Following gene: 150009132

Centisome position: 62.37

GC content: 36.56

Gene sequence:

>1269_bases
ATGGCAACATTGAAAATAGTGCTTCATACAGCGAATCTAAGAAAGGATGGTACTTATCCTGTATCACTAAGAGTTATCAA
GTACATGAAAACAAAATACTGCTCTACAGGGTTATATGCACATCTAAGCGAATGGGATGAAAGAGCGGAGCGTTTTGTTA
ACAACAAGAAAATCTGTCCAATGAACAAAGAATACAATGCAAGAATTATTGAATTAGTAGCAAGGGCACAAGCGGTTATC
CTTCAATTCGATCGGGATGGTATAGATTGGACGCTTAATCAATTCGAAGAAGAATTTACCCATAAAACAAAAAAGGGGAA
ATTTTTAGATTACGCCAACAAGATCATAAAGAATTTGAAAGAGACTGGGCACAATACCACTAGTAAAATATATGAAGCGG
TTATTCACAACTTATCATTATTTGATCCCAAACTAAAGAGTAGGCTGTTGCAAGAAATAGACATAAAATACATCCATGCC
TACAATTCCTTTATGGAAAAACGAGGATGGGTCGGTAATACGAGGTTACATGAGATGAAAACTTTAAGAGCCATATTGAA
TCGAGCTATATTGGAAAAAGAGTGCACCGCCAATTTTTATCCTTTTGGGAAAGGAGGATTCCCTATCTCCTCTTTAGCGG
AGGAGACACGCAAAAGGTATCTCTCTGAGGAATCGCTCAAAAAACTGATAGGCACAAAATCGAATAACAAGAAAAACGAG
GAGGCCAGACTTCTATTCATTTTCTCCTATCTATGTTTCGGCATGAGCTATGTAGACATGGCTAACTTGAAAAAAGATAA
TATCATTACAGAAAACGGGAAAGAGTATATTATATATAAACGACATAAGACTGAGCATAACAAAAACGCAAAATTCATTA
AAATACCTCTAGGCAAAGACCTAAAGGAAATACTCGAGTGGTTCTTTAACAACAGCAAGCTATTAGGCGACCATATACTT
CCATTGATGACAATAGATTGTACTGGGGACAAATTATACGATCATTTACAAAGAAGACGTGCGAAATACAACAATTACCT
TAAACGTTTGGCTACAGAATTTGAGCTGCCAGAGAAGATCACAAGCTATGTGAGCCGTCATTCGATGGCTATGACATTAC
AAGATGATGGAACACCAAGGGAGATCATCAGCCAAATCATGGGACATAAGGACTTGAAAACGACGAATGTCTATCTAGAC
AGCTTTGGTAATGAGAAAATTGAAGAAGTTACGAATAAATCTCTCTATAAAAATAGAATAGCATTATGA

Upstream 100 bases:

>100_bases
TAAATATTACTAACAAGGTATCACAACTATAACTCATTTAAAGCAATCATATAAAATCGGCTCATTATTTTTGCGGTATA
AACTTTAAAATAATAGAATC

Downstream 100 bases:

>100_bases
GAATAGCGGCTTATGAAAATTTCATCACTAAATTATTGATGAATAACAAATGCATGGATATAAATGAGATCGATAAGTAT
ATTCTCCGAACGACCTCTAA

Product: tyrosine type site-specific recombinase

Products: NA

Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Protein; Bacteriophage Integrase; Site-Specific Recombinase IntIA; Integrase/Transposase; Integrase/Site-Specific Recombinase; Recombinase/Integrase; Phage Integrase

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MATLKIVLHTANLRKDGTYPVSLRVIKYMKTKYCSTGLYAHLSEWDERAERFVNNKKICPMNKEYNARIIELVARAQAVI
LQFDRDGIDWTLNQFEEEFTHKTKKGKFLDYANKIIKNLKETGHNTTSKIYEAVIHNLSLFDPKLKSRLLQEIDIKYIHA
YNSFMEKRGWVGNTRLHEMKTLRAILNRAILEKECTANFYPFGKGGFPISSLAEETRKRYLSEESLKKLIGTKSNNKKNE
EARLLFIFSYLCFGMSYVDMANLKKDNIITENGKEYIIYKRHKTEHNKNAKFIKIPLGKDLKEILEWFFNNSKLLGDHIL
PLMTIDCTGDKLYDHLQRRRAKYNNYLKRLATEFELPEKITSYVSRHSMAMTLQDDGTPREIISQIMGHKDLKTTNVYLD
SFGNEKIEEVTNKSLYKNRIAL

Sequences:

>Translated_422_residues
MATLKIVLHTANLRKDGTYPVSLRVIKYMKTKYCSTGLYAHLSEWDERAERFVNNKKICPMNKEYNARIIELVARAQAVI
LQFDRDGIDWTLNQFEEEFTHKTKKGKFLDYANKIIKNLKETGHNTTSKIYEAVIHNLSLFDPKLKSRLLQEIDIKYIHA
YNSFMEKRGWVGNTRLHEMKTLRAILNRAILEKECTANFYPFGKGGFPISSLAEETRKRYLSEESLKKLIGTKSNNKKNE
EARLLFIFSYLCFGMSYVDMANLKKDNIITENGKEYIIYKRHKTEHNKNAKFIKIPLGKDLKEILEWFFNNSKLLGDHIL
PLMTIDCTGDKLYDHLQRRRAKYNNYLKRLATEFELPEKITSYVSRHSMAMTLQDDGTPREIISQIMGHKDLKTTNVYLD
SFGNEKIEEVTNKSLYKNRIAL
>Mature_421_residues
ATLKIVLHTANLRKDGTYPVSLRVIKYMKTKYCSTGLYAHLSEWDERAERFVNNKKICPMNKEYNARIIELVARAQAVIL
QFDRDGIDWTLNQFEEEFTHKTKKGKFLDYANKIIKNLKETGHNTTSKIYEAVIHNLSLFDPKLKSRLLQEIDIKYIHAY
NSFMEKRGWVGNTRLHEMKTLRAILNRAILEKECTANFYPFGKGGFPISSLAEETRKRYLSEESLKKLIGTKSNNKKNEE
ARLLFIFSYLCFGMSYVDMANLKKDNIITENGKEYIIYKRHKTEHNKNAKFIKIPLGKDLKEILEWFFNNSKLLGDHILP
LMTIDCTGDKLYDHLQRRRAKYNNYLKRLATEFELPEKITSYVSRHSMAMTLQDDGTPREIISQIMGHKDLKTTNVYLDS
FGNEKIEEVTNKSLYKNRIAL

Specific function: Unknown

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49431; Mature: 49300

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00108 PROTEIN_KINASE_ST

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLKIVLHTANLRKDGTYPVSLRVIKYMKTKYCSTGLYAHLSEWDERAERFVNNKKICP
CCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
MNKEYNARIIELVARAQAVILQFDRDGIDWTLNQFEEEFTHKTKKGKFLDYANKIIKNLK
CCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ETGHNTTSKIYEAVIHNLSLFDPKLKSRLLQEIDIKYIHAYNSFMEKRGWVGNTRLHEMK
HCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
TLRAILNRAILEKECTANFYPFGKGGFPISSLAEETRKRYLSEESLKKLIGTKSNNKKNE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCH
EARLLFIFSYLCFGMSYVDMANLKKDNIITENGKEYIIYKRHKTEHNKNAKFIKIPLGKD
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCCCCEEEECCCCC
LKEILEWFFNNSKLLGDHILPLMTIDCTGDKLYDHLQRRRAKYNNYLKRLATEFELPEKI
HHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TSYVSRHSMAMTLQDDGTPREIISQIMGHKDLKTTNVYLDSFGNEKIEEVTNKSLYKNRI
HHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHC
AL
CC
>Mature Secondary Structure 
ATLKIVLHTANLRKDGTYPVSLRVIKYMKTKYCSTGLYAHLSEWDERAERFVNNKKICP
CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
MNKEYNARIIELVARAQAVILQFDRDGIDWTLNQFEEEFTHKTKKGKFLDYANKIIKNLK
CCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ETGHNTTSKIYEAVIHNLSLFDPKLKSRLLQEIDIKYIHAYNSFMEKRGWVGNTRLHEMK
HCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
TLRAILNRAILEKECTANFYPFGKGGFPISSLAEETRKRYLSEESLKKLIGTKSNNKKNE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCH
EARLLFIFSYLCFGMSYVDMANLKKDNIITENGKEYIIYKRHKTEHNKNAKFIKIPLGKD
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCCCCEEEECCCCC
LKEILEWFFNNSKLLGDHILPLMTIDCTGDKLYDHLQRRRAKYNNYLKRLATEFELPEKI
HHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TSYVSRHSMAMTLQDDGTPREIISQIMGHKDLKTTNVYLDSFGNEKIEEVTNKSLYKNRI
HHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHC
AL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA