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The map label for this gene is rprY [H]

Identifier: 150009079

GI number: 150009079

Start: 2923804

End: 2924535

Strand: Direct

Name: rprY [H]

Synonym: BDI_2480

Alternate gene names: 150009079

Gene position: 2923804-2924535 (Clockwise)

Preceding gene: 150009078

Following gene: 150009094

Centisome position: 60.77

GC content: 41.53

Gene sequence:

>732_bases
ATGGAAGAAAAACTAAAGATCTTCTTTTGTGAAGACGATGAGAATTTAGGAATGCTTTTAAGAGAATACTTACAAGCTAA
AGGGTATGTAACGGACCTATTCTCTGACGGAGAAGCCGGATACAAAGGTTTTACCAAAGGTAAATACGATCTTTGTGTGT
TGGATGTCATGATGCCAAAGAAAGATGGTTTCACCTTGGCACAAGAAATTCGCTCTATCAATCCTGATATCCCTATTATC
TTCCTTACAGCCAAGACTATGAAGGAAGACATCTTGGAAGGATTCAAGATCGGCGCAGATGACTACTTGACAAAACCGTT
TAGCATGGAAGAGCTATTGCTTCGTATCGAGGCTATCCTTCGCCGTGTGAAAGGTAAGAAGATGAAAGATATTCCTTTCT
ACAAGTTAGGAAACTTCTTGTTCGATACCCAAAAACAAACGTTGGCTATCGGCGACAAGGTTACAAAACTTACCACGAAG
GAATGCGAATTATTAAGCTTGTTGTGCGCCCACGCAAATGAGATCCTTGAGCGTAACTACGCCTTGAAGACAATCTGGGT
AGACGATAACTATTTCAACGCTCGTAGCATGGACGTTTATATCACGAAATTACGTAAATTGTTGAAAGACGATCCGGGTA
TCGAGATCATCAACATCCACGGCAAGGGGTATAAATTAATCACTCCTTCCGGGGAGGAACAAGCCCGTGAGGAAGGCATA
CAAGTGCTTTAA

Upstream 100 bases:

>100_bases
AAATTATTGAGGACCACAAAGGTACGATCCGTGCCGAAAGTGGTGCGGGAAACATTGGAACAAAATTTATTATTACTTTA
CCTCTTATAAAAAGTTAGTT

Downstream 100 bases:

>100_bases
TTCACTTGAACAATAACGACAGAAAAGGCTGGCCTACATTTAGCCAGCCTTTTTTATACTTTCCTTCTTTTCCAGACTAA
GAAGATCCCGAAAACGATCA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MEEKLKIFFCEDDENLGMLLREYLQAKGYVTDLFSDGEAGYKGFTKGKYDLCVLDVMMPKKDGFTLAQEIRSINPDIPII
FLTAKTMKEDILEGFKIGADDYLTKPFSMEELLLRIEAILRRVKGKKMKDIPFYKLGNFLFDTQKQTLAIGDKVTKLTTK
ECELLSLLCAHANEILERNYALKTIWVDDNYFNARSMDVYITKLRKLLKDDPGIEIINIHGKGYKLITPSGEEQAREEGI
QVL

Sequences:

>Translated_243_residues
MEEKLKIFFCEDDENLGMLLREYLQAKGYVTDLFSDGEAGYKGFTKGKYDLCVLDVMMPKKDGFTLAQEIRSINPDIPII
FLTAKTMKEDILEGFKIGADDYLTKPFSMEELLLRIEAILRRVKGKKMKDIPFYKLGNFLFDTQKQTLAIGDKVTKLTTK
ECELLSLLCAHANEILERNYALKTIWVDDNYFNARSMDVYITKLRKLLKDDPGIEIINIHGKGYKLITPSGEEQAREEGI
QVL
>Mature_243_residues
MEEKLKIFFCEDDENLGMLLREYLQAKGYVTDLFSDGEAGYKGFTKGKYDLCVLDVMMPKKDGFTLAQEIRSINPDIPII
FLTAKTMKEDILEGFKIGADDYLTKPFSMEELLLRIEAILRRVKGKKMKDIPFYKLGNFLFDTQKQTLAIGDKVTKLTTK
ECELLSLLCAHANEILERNYALKTIWVDDNYFNARSMDVYITKLRKLLKDDPGIEIINIHGKGYKLITPSGEEQAREEGI
QVL

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=237, Percent_Identity=32.9113924050633, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786784, Length=231, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=31.858407079646, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=30.6306306306306, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI87082012, Length=226, Percent_Identity=33.6283185840708, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=33.6244541484716, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=28.0701754385965, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=32.4444444444444, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=28.5067873303167, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=31.4655172413793, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=27.2321428571429, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=28.0701754385965, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=26.9911504424779, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI145693140, Length=240, Percent_Identity=29.1666666666667, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1790437, Length=119, Percent_Identity=31.0924369747899, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788550, Length=122, Percent_Identity=29.5081967213115, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790299, Length=111, Percent_Identity=27.027027027027, Blast_Score=65, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6322000, Length=106, Percent_Identity=32.0754716981132, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27903; Mature: 27903

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKLKIFFCEDDENLGMLLREYLQAKGYVTDLFSDGEAGYKGFTKGKYDLCVLDVMMPK
CCCCEEEEEEECCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCC
KDGFTLAQEIRSINPDIPIIFLTAKTMKEDILEGFKIGADDYLTKPFSMEELLLRIEAIL
CCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHH
RRVKGKKMKDIPFYKLGNFLFDTQKQTLAIGDKVTKLTTKECELLSLLCAHANEILERNY
HHHCCCCCCCCCHHHHCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ALKTIWVDDNYFNARSMDVYITKLRKLLKDDPGIEIINIHGKGYKLITPSGEEQAREEGI
EEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHCCC
QVL
CCC
>Mature Secondary Structure
MEEKLKIFFCEDDENLGMLLREYLQAKGYVTDLFSDGEAGYKGFTKGKYDLCVLDVMMPK
CCCCEEEEEEECCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCC
KDGFTLAQEIRSINPDIPIIFLTAKTMKEDILEGFKIGADDYLTKPFSMEELLLRIEAIL
CCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHH
RRVKGKKMKDIPFYKLGNFLFDTQKQTLAIGDKVTKLTTKECELLSLLCAHANEILERNY
HHHCCCCCCCCCHHHHCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ALKTIWVDDNYFNARSMDVYITKLRKLLKDDPGIEIINIHGKGYKLITPSGEEQAREEGI
EEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHCCC
QVL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]