| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009072
Identifier: 150009072
GI number: 150009072
Start: 2911255
End: 2911926
Strand: Reverse
Name: 150009072
Synonym: BDI_2473
Alternate gene names: NA
Gene position: 2911926-2911255 (Counterclockwise)
Preceding gene: 150009073
Following gene: 150009071
Centisome position: 60.52
GC content: 35.27
Gene sequence:
>672_bases ATGAAACAGTTTATAAATGTAAAAAGAGTATTTACCGTATTGATTATACTTTTGTTATTAATATCGTGTAGGGTCGAAAC TGATTATAGACCATTATTTGACAAAGATTTATCAAATGCTGATTATGATAGTTCGGTTTGGACCTTTAAAAATGGCATAC TTACTGCCACAGCCGATCAATCTATTTGGACAAAGGTGCAGTATGAAAATTTTATCTTGGATTTAGAATTCAAGACAGAT GTGAATACAAATAGTGGGGTTGTGATTTATTGTACGGATAAGGGTAATTGGATCCCATCTTCCATTGAGATTCAAATAGC GGATGATCATCATCCTGAATGGCAATCATATCCAGAATATTGGCGTTGTGGTTCTATTTATGGACATAAAGGAGCAAATG AACAATTGGTCGTGAAGAAACCGGGAGAATGGAACCGAATGATTATCACTGCTAAAGGTCAGCAGATAGATATCGAATTG AATGGAAAACATATTGTTTCGGCTAATTTAGCAGATTGGACTTCTGGAACAACAAATCCAGATGGAACAGAGATTCCGGA ATGGCTACCAATCCCGTATGCGAATATGCCAACAAAAGGTTATATTGGTTTGCAAGGGAAACATGGAGAATCTAATATTT GGTTTAGGAATATTCAACTGAAACAACTTTAA
Upstream 100 bases:
>100_bases GCGACGAATCAAGACGTATTTCCGATTCCTTATCGTGCATTGAATGCGAATCCTTTGTTAAAACAAACAACAGCTGGCTT TTAATAAATAGAATCGATAT
Downstream 100 bases:
>100_bases AATCATCATTATTATGAGACATATATCAAGAAGAGATTTTTTGAAGACAGGAGCTTTAGCAGCAGGTTTAACGATCGTAC CAAATTCTGTTTTAGGTAAA
Product: putative glycosylhydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKQFINVKRVFTVLIILLLLISCRVETDYRPLFDKDLSNADYDSSVWTFKNGILTATADQSIWTKVQYENFILDLEFKTD VNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEYWRCGSIYGHKGANEQLVVKKPGEWNRMIITAKGQQIDIEL NGKHIVSANLADWTSGTTNPDGTEIPEWLPIPYANMPTKGYIGLQGKHGESNIWFRNIQLKQL
Sequences:
>Translated_223_residues MKQFINVKRVFTVLIILLLLISCRVETDYRPLFDKDLSNADYDSSVWTFKNGILTATADQSIWTKVQYENFILDLEFKTD VNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEYWRCGSIYGHKGANEQLVVKKPGEWNRMIITAKGQQIDIEL NGKHIVSANLADWTSGTTNPDGTEIPEWLPIPYANMPTKGYIGLQGKHGESNIWFRNIQLKQL >Mature_223_residues MKQFINVKRVFTVLIILLLLISCRVETDYRPLFDKDLSNADYDSSVWTFKNGILTATADQSIWTKVQYENFILDLEFKTD VNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEYWRCGSIYGHKGANEQLVVKKPGEWNRMIITAKGQQIDIEL NGKHIVSANLADWTSGTTNPDGTEIPEWLPIPYANMPTKGYIGLQGKHGESNIWFRNIQLKQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25554; Mature: 25554
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFINVKRVFTVLIILLLLISCRVETDYRPLFDKDLSNADYDSSVWTFKNGILTATADQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCC SIWTKVQYENFILDLEFKTDVNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEY CCEEEEEECEEEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCH WRCGSIYGHKGANEQLVVKKPGEWNRMIITAKGQQIDIELNGKHIVSANLADWTSGTTNP HCCCCEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCC DGTEIPEWLPIPYANMPTKGYIGLQGKHGESNIWFRNIQLKQL CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECC >Mature Secondary Structure MKQFINVKRVFTVLIILLLLISCRVETDYRPLFDKDLSNADYDSSVWTFKNGILTATADQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCC SIWTKVQYENFILDLEFKTDVNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEY CCEEEEEECEEEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCH WRCGSIYGHKGANEQLVVKKPGEWNRMIITAKGQQIDIELNGKHIVSANLADWTSGTTNP HCCCCEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCC DGTEIPEWLPIPYANMPTKGYIGLQGKHGESNIWFRNIQLKQL CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA