| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yqgH [H]
Identifier: 150009022
GI number: 150009022
Start: 2843146
End: 2844333
Strand: Direct
Name: yqgH [H]
Synonym: BDI_2418
Alternate gene names: 150009022
Gene position: 2843146-2844333 (Clockwise)
Preceding gene: 150009021
Following gene: 150009023
Centisome position: 59.09
GC content: 46.8
Gene sequence:
>1188_bases GTGAGAAAGTTTATAGAAAAATTAGTGGAAGGAGGATTCTTGATCAGTGGAAGCGTCAGTAGCTTTACGATCTTGTTGAT CATTGTCTTCTTATTTAAAGAGGCCGCAGGTCTTTTTAACAGCCCGGAGGTAGAGGAAGGATATATATTGGCTGTGAATC AGGAAAATCCAGTCGAACATTTGTCTCCCGAGCAAATCATGGATGTCTTCGATGCCAATATCACCAATTGGGAAGATTTA AACGGAGAAAATCAAGATATACTTGTCTTCCGTTTCTCGGACCTAACCAACTATTATACGGAAGAAGAGCTAGGTGAAGA ATTTCAATATGTTCCCGAGAAAATCAATGAACTTATCCATAAAGAGCCGGGGATTATCGCATTCTTTCCGGAACAATACA AGTCGGAGAACTTTACGGGAAAAATCATATCGGGAGCCACGATCAAACCTTCGGAGTTCTTTGGAGGGACGAAATGGTAT CCTACCTCCGCTCCCGCTCCGATCTTTGGCTTGATCCCTCTATTACTAGGCACACTTTTAGTAAGTATAGGCGCGATCGC CTTATCCCTCCCCTTCGGAGTAGCGGTAGCGATCTATATGGCAGAGATTGCCAATACAAAAACCCGTAATTTGCTAAAGC CTATTATCGAGTTATTGGCAGGTATTCCCTCAGTCGTTTATGGTTTCTTCGGATTGGTGGTGATCGTTCCCCTTATCCAA AAGACCTTAGACCTTCCGGTAGGCGAGACCGCTTTCGCCGGAAGCGTGGTTTTAGCGATCATGGCGTTGCCGACCATCAT CACGGTAGCGGAAGATGCCATGCGAACTACCCCACGAGCCATGAAAGAGGCCAGCTTGGCATTGGGAGCCACGCAATGGC AAACCATCTACAAAGTAATAATCCCCTACTCCATATCCGGTATCACGTCCGCTGTCGTATTAGGTATAGGACGTGCGATC GGTGAGACGATGGCCGTATTGATGGTAACCGGAAACGCCGCCGTTATCCCTACCTCGTTCTTCGAACCGGTACGGACAAT TCCTGCCACGATAGCAGCGGAATTAGGTGAGGCTCCCGCAGGTGGAGCGCATTACCAAGCCTTGTTTATGCTGGGAGCCG TGTTGTTCCTCATCACCTTGGGGTTGAGCATCGCCGTAGAATATATTTCATCCAAACGTAAAATTTAA
Upstream 100 bases:
>100_bases AATACATTTGTAATAATTTTGAAACAATTCTTTCAAGCGGGTTTAATCTCTCCTTAATATAGAGGCTCTTTCTTTGCAGC AGAATAAATAGGCAAAGATT
Downstream 100 bases:
>100_bases TTAAAGATATGGCACCTATTCAACATTTAGGGAATATAGACAAGAGGAAACGGGCCTCTCAACAGGTTGCTTTCGGTTTC TTTTCTTTCCTGAGTTATTT
Product: putative ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MRKFIEKLVEGGFLISGSVSSFTILLIIVFLFKEAAGLFNSPEVEEGYILAVNQENPVEHLSPEQIMDVFDANITNWEDL NGENQDILVFRFSDLTNYYTEEELGEEFQYVPEKINELIHKEPGIIAFFPEQYKSENFTGKIISGATIKPSEFFGGTKWY PTSAPAPIFGLIPLLLGTLLVSIGAIALSLPFGVAVAIYMAEIANTKTRNLLKPIIELLAGIPSVVYGFFGLVVIVPLIQ KTLDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIPYSISGITSAVVLGIGRAI GETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGGAHYQALFMLGAVLFLITLGLSIAVEYISSKRKI
Sequences:
>Translated_395_residues MRKFIEKLVEGGFLISGSVSSFTILLIIVFLFKEAAGLFNSPEVEEGYILAVNQENPVEHLSPEQIMDVFDANITNWEDL NGENQDILVFRFSDLTNYYTEEELGEEFQYVPEKINELIHKEPGIIAFFPEQYKSENFTGKIISGATIKPSEFFGGTKWY PTSAPAPIFGLIPLLLGTLLVSIGAIALSLPFGVAVAIYMAEIANTKTRNLLKPIIELLAGIPSVVYGFFGLVVIVPLIQ KTLDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIPYSISGITSAVVLGIGRAI GETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGGAHYQALFMLGAVLFLITLGLSIAVEYISSKRKI >Mature_395_residues MRKFIEKLVEGGFLISGSVSSFTILLIIVFLFKEAAGLFNSPEVEEGYILAVNQENPVEHLSPEQIMDVFDANITNWEDL NGENQDILVFRFSDLTNYYTEEELGEEFQYVPEKINELIHKEPGIIAFFPEQYKSENFTGKIISGATIKPSEFFGGTKWY PTSAPAPIFGLIPLLLGTLLVSIGAIALSLPFGVAVAIYMAEIANTKTRNLLKPIIELLAGIPSVVYGFFGLVVIVPLIQ KTLDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVIIPYSISGITSAVVLGIGRAI GETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPAGGAHYQALFMLGAVLFLITLGLSIAVEYISSKRKI
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=237, Percent_Identity=35.8649789029536, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1790163, Length=227, Percent_Identity=27.3127753303965, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 42702; Mature: 42702
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFIEKLVEGGFLISGSVSSFTILLIIVFLFKEAAGLFNSPEVEEGYILAVNQENPVEH CHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHH LSPEQIMDVFDANITNWEDLNGENQDILVFRFSDLTNYYTEEELGEEFQYVPEKINELIH CCHHHHHHHHCCCCCCCHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH KEPGIIAFFPEQYKSENFTGKIISGATIKPSEFFGGTKWYPTSAPAPIFGLIPLLLGTLL CCCCEEEECCHHHCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH VSIGAIALSLPFGVAVAIYMAEIANTKTRNLLKPIIELLAGIPSVVYGFFGLVVIVPLIQ HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KTLDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHH IPYSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPA HHHCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECHHHHHHHHHHHHHHHHHHCCCCC GGAHYQALFMLGAVLFLITLGLSIAVEYISSKRKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRKFIEKLVEGGFLISGSVSSFTILLIIVFLFKEAAGLFNSPEVEEGYILAVNQENPVEH CHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHH LSPEQIMDVFDANITNWEDLNGENQDILVFRFSDLTNYYTEEELGEEFQYVPEKINELIH CCHHHHHHHHCCCCCCCHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH KEPGIIAFFPEQYKSENFTGKIISGATIKPSEFFGGTKWYPTSAPAPIFGLIPLLLGTLL CCCCEEEECCHHHCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH VSIGAIALSLPFGVAVAIYMAEIANTKTRNLLKPIIELLAGIPSVVYGFFGLVVIVPLIQ HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KTLDLPVGETAFAGSVVLAIMALPTIITVAEDAMRTTPRAMKEASLALGATQWQTIYKVI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHH IPYSISGITSAVVLGIGRAIGETMAVLMVTGNAAVIPTSFFEPVRTIPATIAAELGEAPA HHHCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECHHHHHHHHHHHHHHHHHHCCCCC GGAHYQALFMLGAVLFLITLGLSIAVEYISSKRKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]