| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is mutL
Identifier: 150008991
GI number: 150008991
Start: 2795877
End: 2797724
Strand: Reverse
Name: mutL
Synonym: BDI_2387
Alternate gene names: 150008991
Gene position: 2797724-2795877 (Counterclockwise)
Preceding gene: 150008992
Following gene: 150008989
Centisome position: 58.15
GC content: 49.19
Gene sequence:
>1848_bases ATGAGCGATATCATTCATTTACTTCCGGACCATATCGCCAATCAAATCGCGGCGGGAGAGGTGATTCAACGTCCGGCCTC TGTCGTTAAAGAGTTGGTCGAGAATGCGGTGGACGCTGGCGCTTCCAATATCCAAGTGAACATTAAGGATGCGGGTAAGA CATTGATACAGGTGATCGATGACGGGAAAGGTATGTCCGAGACGGATGCTCGCATGGCTTTTGAGCGGCACGCTACTTCT AAGATTTCTACGGCCGAGGATTTATTCTCTTTGCATACGATGGGTTTCCGAGGTGAGGCATTGGCCTCTATCGCCGCTGT CGCCCATATAGAGTTGCGTACCCGGGCTAGAGGGACCGAGCTTGGCACTTGCCTATCCATCGCGGGTTCCAATCTGGAGA GTATCGAGCCGGAGGCTTGTAACGAGGGAAGTATCTTCTCGGTAAAGAATCTTTTCTTTAATGTTCCCGCCCGCCGGAAA TTCTTGAAGTCGAATGAGACGGAATTCCGGAATATCATCAATGAGTTCGAGCGAATCGCCTTGGTGAATCCGCAGGTGGG TATGTCTCTTTATCATAATGATGCGGAGATATTCAATCTGCCCGAGTCGGGGTTACGTCAGCGCATCATTAATATATATG GTAAGAGTTTAAACCAGAAGTTGCTCTCTCTGGATGCCCAAAGTTCCATGGTGACTATTTCCGGTTTCGTGGGGCGTCCG GACTCGGCGAAGAAGCGAGGGGCATTGCAGTTTTTTTTTGTGAATGGTCGTTATATGAAGCATCCTTATTTCCATAAGGC GATCATGCAGGCCTATGAGCAATTGATTCCTGCCGGGGATATGCCGAATTATTTTGTTTATTTCACGTTGGATCCCTCCT CGATCGATGTCAATATCCATCCGACAAAGACGGAGATTAAGTTTGAGAACGAGCAACCGATCTGGCAGATCTTGATGGCC GCTACCCGGGAGGCGTTGGCTAAATCGAGCGCTATCCCTACGATTGATTTCGATGTGGAGGACGCGATCGATATTCCTGT TTACAACCCGGTCAAGAAAAGTGAGCCTAGTACTTATAAGGCCCCGAAAGTGCAAGTGGATTCCAGTTATAATCCGTTTG ACACTACTTCCTATAAAAAACCGGAATTCGATTGGTCTAAATTATATCAAGGGTTTGAGAACGACCGAGTGGCTGTCCAA CGGGAGTCCGAGACTTTCGAGGATGCCCCGATCGAGGAATTGCCGGCCGAGGCTTCGGATCCGGAAAAACTGTTTACGGA GGTAAGCAATCCTTGCTATCAATATAAAGGGCGATATATCGTGACATCCTTGAAATCGGGTCTGGCGATTATTGACCAGC ATCGTGCGCATGTGCGTATCTTGTTTGACCAATACCTGTCGAATATCCGTCAGCAACAAGGTGTATCCCAACAAGTCTTA TTCCCGGAGATCGTAGAGTTTACCGCTGCCGAGGCGGCTGTACTGCCTTCCTTATTGGAGGATTTGTGCTTCGTCGGCTT TGATCTGAGCAATCTGGGAAATGACAATTACGCGATCAATGGCCTGCCCGCCGGTATAGAGAACCTTGATCCGGTAAATT TGGTAAAGGATATCGTGGACCGGGCGATCGAGACCGGATGCGCAGTGCATGAGAAAATCTGCGAGGCCATCGCCTTGTCT TTAGCCAAAGCCGCCGCTATCCGTCCCGGCAAATCCTTATCCTTGGAAGAGATGGATCATCTGATCGCCTCCCTGTTCTC TTGTTCGGACTCGAACCTGACCCCGGATGGAAAGACGATTATCTCCATGCTGACAGATGAGGAGCTGGAGAGAAGATTTA AGTGCTAG
Upstream 100 bases:
>100_bases TGGGGCGAGGCGAGGATTCCCGGGCTCGTAGGTATAAGAATGTGAAACTGGCGGTGGCCTTGGCGGTCTTGGCTGCTTTC TTTTGGTATTTGTTCTGGTA
Downstream 100 bases:
>100_bases GGATGATTTCGATGACATAGGTTTCACGGCTGCATTTACATTTAGGTTTCCTGGACATGCGGCCCGGAAGCAGGCGTGGA ACACATCTTCCTCGATCGGA
Product: DNA mismatch repair protein mutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MSDIIHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKGMSETDARMAFERHATS KISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTELGTCLSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRK FLKSNETEFRNIINEFERIALVNPQVGMSLYHNDAEIFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRP DSAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMA ATREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYKAPKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAVQ RESETFEDAPIEELPAEASDPEKLFTEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVL FPEIVEFTAAEAAVLPSLLEDLCFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVDRAIETGCAVHEKICEAIALS LAKAAAIRPGKSLSLEEMDHLIASLFSCSDSNLTPDGKTIISMLTDEELERRFKC
Sequences:
>Translated_615_residues MSDIIHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKGMSETDARMAFERHATS KISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTELGTCLSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRK FLKSNETEFRNIINEFERIALVNPQVGMSLYHNDAEIFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRP DSAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMA ATREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYKAPKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAVQ RESETFEDAPIEELPAEASDPEKLFTEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVL FPEIVEFTAAEAAVLPSLLEDLCFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVDRAIETGCAVHEKICEAIALS LAKAAAIRPGKSLSLEEMDHLIASLFSCSDSNLTPDGKTIISMLTDEELERRFKC >Mature_614_residues SDIIHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKGMSETDARMAFERHATSK ISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTELGTCLSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRKF LKSNETEFRNIINEFERIALVNPQVGMSLYHNDAEIFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRPD SAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAA TREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYKAPKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAVQR ESETFEDAPIEELPAEASDPEKLFTEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVLF PEIVEFTAAEAAVLPSLLEDLCFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVDRAIETGCAVHEKICEAIALSL AKAAAIRPGKSLSLEEMDHLIASLFSCSDSNLTPDGKTIISMLTDEELERRFKC
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=322, Percent_Identity=32.9192546583851, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI4505911, Length=328, Percent_Identity=27.4390243902439, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI189458898, Length=328, Percent_Identity=27.4390243902439, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI310128478, Length=355, Percent_Identity=27.0422535211268, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI4505913, Length=355, Percent_Identity=27.0422535211268, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI189458896, Length=320, Percent_Identity=27.5, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI91992162, Length=353, Percent_Identity=27.7620396600567, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI91992160, Length=354, Percent_Identity=27.683615819209, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI263191589, Length=227, Percent_Identity=27.3127753303965, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI310128480, Length=328, Percent_Identity=24.390243902439, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1790612, Length=525, Percent_Identity=30.6666666666667, Blast_Score=234, Evalue=1e-62, Organism=Caenorhabditis elegans, GI71991825, Length=422, Percent_Identity=29.8578199052133, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17562796, Length=374, Percent_Identity=25.9358288770053, Blast_Score=119, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6323819, Length=342, Percent_Identity=31.8713450292398, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6324247, Length=346, Percent_Identity=25.4335260115607, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6325093, Length=288, Percent_Identity=24.6527777777778, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI17136968, Length=318, Percent_Identity=34.5911949685535, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI17136970, Length=360, Percent_Identity=25.2777777777778, Blast_Score=106, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_PARD8 (A6LEJ8)
Other databases:
- EMBL: CP000140 - RefSeq: YP_001303734.1 - ProteinModelPortal: A6LEJ8 - SMR: A6LEJ8 - STRING: A6LEJ8 - GeneID: 5307536 - GenomeReviews: CP000140_GR - KEGG: pdi:BDI_2387 - eggNOG: COG0323 - HOGENOM: HBG520262 - OMA: MACKAAV - ProtClustDB: CLSK823666 - BioCyc: PDIS435591:BDI_2387-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 68349; Mature: 68218
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIIHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH DGKGMSETDARMAFERHATSKISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC LGTCLSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFERIA HHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHEE LVNPQVGMSLYHNDAEIFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRP ECCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC DSAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIH CCHHHCCCEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEC PTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYK CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC APKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAVQRESETFEDAPIEELPAEASD CCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCCCC PEKLFTEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVL HHHHHHHHCCCHHHHCCCEEEEEHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH FPEIVEFTAAEAAVLPSLLEDLCFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHH RAIETGCAVHEKICEAIALSLAKAAAIRPGKSLSLEEMDHLIASLFSCSDSNLTPDGKTI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH ISMLTDEELERRFKC HHHHHHHHHHHHCCC >Mature Secondary Structure SDIIHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHH DGKGMSETDARMAFERHATSKISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC LGTCLSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFERIA HHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHEE LVNPQVGMSLYHNDAEIFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRP ECCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC DSAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIH CCHHHCCCEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEC PTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYK CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC APKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAVQRESETFEDAPIEELPAEASD CCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCCCC PEKLFTEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVL HHHHHHHHCCCHHHHCCCEEEEEHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH FPEIVEFTAAEAAVLPSLLEDLCFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHH RAIETGCAVHEKICEAIALSLAKAAAIRPGKSLSLEEMDHLIASLFSCSDSNLTPDGKTI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH ISMLTDEELERRFKC HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA