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The map label for this gene is secY [H]

Identifier: 150008964

GI number: 150008964

Start: 2779824

End: 2781164

Strand: Reverse

Name: secY [H]

Synonym: BDI_2360

Alternate gene names: 150008964

Gene position: 2781164-2779824 (Counterclockwise)

Preceding gene: 150008965

Following gene: 150008963

Centisome position: 57.8

GC content: 42.95

Gene sequence:

>1341_bases
ATGAGAGCTGTTGAAACAATCAAGAATATCTGGAAGATTGAGGATCTGAGAAATCGGATCCTCACCACTCTTTTATTGGT
GGCTATATACCGTTTTGGTACGTATGTAGTGCTTCCGGGTATCGATCCCAAAGCGTTAACCGCTTTACAGGAGCAGACAA
GAGGCGGATTGCTTGCACTGTTGGATATGTTCTCAGGTGGAGCCTTTTCTAACGCATCTATTTTTGCGTTGGGAATCATG
CCATATATCTCCGCTTCAATTGTTATGCAGTTGTTAGCCATCGCAGTTCCTTCTTTCCAAAAATTGCAGAGAGAGGGTGA
GAGTGGCCGTAGAAAAATCAATCAGTGGACTCGTTACTTGACGATAGCGATCTTGTTATTCCAAGGTCCTACTTACTTGG
TGAATTTAAGCGTTCAGCTTAAGGCTGCCGGCGCTGCTTTACCGGGTGGTATTTGGTTCACGATCTCATCTACGATCATC
TTGGCTGCGGGAAGTATGTTTATCTTATGGCTAGGTGAAAGAATTACAGATAAAGGTGTTGGAAATGGTATTTCATTTAT
CATTTTAGTTGGTATTATAGCCCGTCTGCCGCACTCTTTGTTCCAAGAATTCGTTTCTAGAACAAGTGAGAAAACCGGTG
GTCTGGTTATGTTCTTATTTGAGATGTTGTTCCTTTTGCTTGTTATCGCTGGTGCGATCTTATTGGTACAAGGTACTCGT
AAGGTCCCCGTGCAATATGCGAAAAGAATTATCGGTAATAAACAATATGGTGGCGCGCGTCAGTATATCCCTCTGAAGGT
GAATGCCGCTAACGTAATGCCTATCATCTTCGCTCAGGCGATCATGTTTATTCCTATCTCAATTGTAGGTTTCTCTAGTA
CGGGAGAGCAGAGCGGTTTTTGGGCTGCTTTCATGGATAATACGGGATTTTGGTACAACTTCGTGTTTGCGGTGTTGATT
ATCCTGTTTACGTATTTCTATACGGCTATTACGATCAATCCGACCCAGATGTCAGATGATTTGAAGAGAAACAATGGTTT
TATTCCGGGTGTGAAACCGGGTAAGAATACCAAAGACTATCTGGATACCATTATGGACCGTATTACTTTGCCGGGTGCTT
TTTTCCTTGCGTTGGTTGCTATCATGCCCGCTTTCGCTAGAATTGCCGGTGTAAGTATGGAGTTCTCCCAATTCTTTGGT
GGTACATCTTTGTTGATTTTGGTTGGTGTGGTGTTGGATACATTGCAGCAAGTTGAAAGTCATTTGCTAATGCGTCATTA
TGACGGTTTGTTGAAGTCAGGAAGAATTAAAGGCCGTACAGGCTCTGTTGCCGCTTATTAA

Upstream 100 bases:

>100_bases
TAGCTTGACCGCTAAGTTAGAGGTTGAGGCTCACGCTTTCTCTAAGAGCGCAGAGGCAGCTATCCAAGCCGCAGGTGGAA
CAGTCGTTAAACTCTAAGTC

Downstream 100 bases:

>100_bases
TAGAATGATCTATTTAAAGACAGATGAAGAGATTGAGTTGATGCGTGAGGCTAATCAACTGGTAGGTAAGACACTTGGCG
AGGTAGCTAAGCATATTGTC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRAVETIKNIWKIEDLRNRILTTLLLVAIYRFGTYVVLPGIDPKALTALQEQTRGGLLALLDMFSGGAFSNASIFALGIM
PYISASIVMQLLAIAVPSFQKLQREGESGRRKINQWTRYLTIAILLFQGPTYLVNLSVQLKAAGAALPGGIWFTISSTII
LAAGSMFILWLGERITDKGVGNGISFIILVGIIARLPHSLFQEFVSRTSEKTGGLVMFLFEMLFLLLVIAGAILLVQGTR
KVPVQYAKRIIGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPISIVGFSSTGEQSGFWAAFMDNTGFWYNFVFAVLI
ILFTYFYTAITINPTQMSDDLKRNNGFIPGVKPGKNTKDYLDTIMDRITLPGAFFLALVAIMPAFARIAGVSMEFSQFFG
GTSLLILVGVVLDTLQQVESHLLMRHYDGLLKSGRIKGRTGSVAAY

Sequences:

>Translated_446_residues
MRAVETIKNIWKIEDLRNRILTTLLLVAIYRFGTYVVLPGIDPKALTALQEQTRGGLLALLDMFSGGAFSNASIFALGIM
PYISASIVMQLLAIAVPSFQKLQREGESGRRKINQWTRYLTIAILLFQGPTYLVNLSVQLKAAGAALPGGIWFTISSTII
LAAGSMFILWLGERITDKGVGNGISFIILVGIIARLPHSLFQEFVSRTSEKTGGLVMFLFEMLFLLLVIAGAILLVQGTR
KVPVQYAKRIIGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPISIVGFSSTGEQSGFWAAFMDNTGFWYNFVFAVLI
ILFTYFYTAITINPTQMSDDLKRNNGFIPGVKPGKNTKDYLDTIMDRITLPGAFFLALVAIMPAFARIAGVSMEFSQFFG
GTSLLILVGVVLDTLQQVESHLLMRHYDGLLKSGRIKGRTGSVAAY
>Mature_446_residues
MRAVETIKNIWKIEDLRNRILTTLLLVAIYRFGTYVVLPGIDPKALTALQEQTRGGLLALLDMFSGGAFSNASIFALGIM
PYISASIVMQLLAIAVPSFQKLQREGESGRRKINQWTRYLTIAILLFQGPTYLVNLSVQLKAAGAALPGGIWFTISSTII
LAAGSMFILWLGERITDKGVGNGISFIILVGIIARLPHSLFQEFVSRTSEKTGGLVMFLFEMLFLLLVIAGAILLVQGTR
KVPVQYAKRIIGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPISIVGFSSTGEQSGFWAAFMDNTGFWYNFVFAVLI
ILFTYFYTAITINPTQMSDDLKRNNGFIPGVKPGKNTKDYLDTIMDRITLPGAFFLALVAIMPAFARIAGVSMEFSQFFG
GTSLLILVGVVLDTLQQVESHLLMRHYDGLLKSGRIKGRTGSVAAY

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=429, Percent_Identity=38.2284382284382, Blast_Score=285, Evalue=4e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49046; Mature: 49046

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00755 SECY_1 ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVETIKNIWKIEDLRNRILTTLLLVAIYRFGTYVVLPGIDPKALTALQEQTRGGLLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCHHHH
LDMFSGGAFSNASIFALGIMPYISASIVMQLLAIAVPSFQKLQREGESGRRKINQWTRYL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
TIAILLFQGPTYLVNLSVQLKAAGAALPGGIWFTISSTIILAAGSMFILWLGERITDKGV
HHHHHHHCCCEEEEEEEEEEEECCCCCCCCEEEEHHHHHHHHCCCHHEEECCCHHHCCCC
GNGISFIILVGIIARLPHSLFQEFVSRTSEKTGGLVMFLFEMLFLLLVIAGAILLVQGTR
CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
KVPVQYAKRIIGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPISIVGFSSTGEQSGF
CCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCE
WAAFMDNTGFWYNFVFAVLIILFTYFYTAITINPTQMSDDLKRNNGFIPGVKPGKNTKDY
EEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCCCCCCCCCHHH
LDTIMDRITLPGAFFLALVAIMPAFARIAGVSMEFSQFFGGTSLLILVGVVLDTLQQVES
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
HLLMRHYDGLLKSGRIKGRTGSVAAY
HHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAVETIKNIWKIEDLRNRILTTLLLVAIYRFGTYVVLPGIDPKALTALQEQTRGGLLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCHHHH
LDMFSGGAFSNASIFALGIMPYISASIVMQLLAIAVPSFQKLQREGESGRRKINQWTRYL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
TIAILLFQGPTYLVNLSVQLKAAGAALPGGIWFTISSTIILAAGSMFILWLGERITDKGV
HHHHHHHCCCEEEEEEEEEEEECCCCCCCCEEEEHHHHHHHHCCCHHEEECCCHHHCCCC
GNGISFIILVGIIARLPHSLFQEFVSRTSEKTGGLVMFLFEMLFLLLVIAGAILLVQGTR
CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
KVPVQYAKRIIGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPISIVGFSSTGEQSGF
CCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCE
WAAFMDNTGFWYNFVFAVLIILFTYFYTAITINPTQMSDDLKRNNGFIPGVKPGKNTKDY
EEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCCCCCCCCCHHH
LDTIMDRITLPGAFFLALVAIMPAFARIAGVSMEFSQFFGGTSLLILVGVVLDTLQQVES
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
HLLMRHYDGLLKSGRIKGRTGSVAAY
HHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA