| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008943
Identifier: 150008943
GI number: 150008943
Start: 2757844
End: 2760480
Strand: Direct
Name: 150008943
Synonym: BDI_2339
Alternate gene names: NA
Gene position: 2757844-2760480 (Clockwise)
Preceding gene: 150008940
Following gene: 150008944
Centisome position: 57.32
GC content: 46.64
Gene sequence:
>2637_bases ATGAAGCTAATACTACTCATAATCTTGATTATCTTCGGCTTTCAATCAAGCGCTTGGGGACAGGCGCCGACTCTCAGTAT CGAGGCTAAACAAGAACCGATCCAAGAAATCATGAAAAAAATAGAGCATCAAACAGGCATGACATTCTCCTACGATCCTT CTATTCTCAAAGGTATTTCCCGGATTACATTCAAATCTGATAACCAATCCATATCGGAATGCCTTACCCGGCTATTCCAA AAGCTCCCTCTGTCTTATCAGATAAACGGTACCCACATCATCTTGAAGAAACTCCCCCGCTCAGTAACCATCAGCGGATT CGTACGGGATAAAGCGACTACAGAATATCTAATCGGGGCCTCCGTTTATGACTCTCGCACACAAAGGGGCACAGCTACCA ATAACCACGGTTTCTTCAGTCTAACCTTACCGGTCGGGGTAGTCCGTCTGGAGACTTCCTACATCGGATACGGACGTTTC TCACATACATTCCAACCGCTCGAACGGGATACCGTGATGGAAATTCTGCTGGAAAGCGGTGAGGCATTGGCCGAAGTTGT CGTTACCGGTAGTAATGACACACAAAACCCGATACAAGCCCCTCAGATGGGAACGATTAAAATAACCCGGAAGATGATCA AGACCATCCCGACCTTATTCGGTGAGGCTGATGTGATCAAAGCCCTGCAAACCCAACCCGGCGTATCAGCCGGAACGGAA GGATTAGCCGGGATGTATGTCCGTGGGGGGAATGGAGACGAGAACCTGTATATGATAGACGGAATCCAACTGTATCAGGT CAATCATCTCGGAGGACTTTTCTCCGCTTTCAACGCCGAGGCTTTGAAAGATGTGGATTTTTATAAATCCGCTTTCCCCG CCCGCTATGGGGGAAGGCTTTCCAGCGTAGTGGATGTGCATACTAAAGATGGCAATATGAAAGAGTACCATGGTAGCGCT ATGCTAGGATTGACCTCCGGTAACTTAAATTTCGAAGGGCCGATCATTAAAGACCGGACTTCGTTCAACGCCTCCTTCCG TCGCTCTTGGCTGGATGCCTTATCCGCACCGGGTTTGGCGATCTACAATAAAATTCAGAAAAAGAAGGGGGAGAAATTCA GCGCACGCTATGCTTTTACCGATCTGAACCTAAAAGTGAACCACCATATCAATGACCGGAGCCAAGCTTACGTTAATTTC TATTTCGGACAGGATTTCCTAAAAGGAGGAAGTTCTGAGTTCTCCGTAGGTGATAATATAACCCCTTTCGAGAACAAGGA CTTTGGAAAGATGCGCTGGGGTAACATCGCATTGTCTTCCGGCTGGTCGTATGTGTTTAACAACAAGATGTTCGGTACCG TCACCTTGGCTTATTCCCATTATCAATCCAAACTAAAACAAGAGACTTCACAATACTACGGAACCGAGGGTGACAAAGAT TATTCTTCACGGTTTATCGAGACCTCAACCCGAAACGGTATCAATGATTTCGGAGTCCATGCGAACTTCGACTATATTCC TACCTTGGCACATCATATCCGTTATGGTACCGACTATCTTTACCATCGTTTCAGCCCGGAATATATCGAGGAAAAGACCT CCGAGAATTTGTCTCCGACCAAACGAACTACCGGAGACGAGCGCCTTTCAGCGAATGAGTTGGCTGTTTTCGCCGAAGAT GACTGGGCGATATCTCCCATTGTCCGGGCTAACGCCGGATTACGCCTGAACATGTACAATATACAAAAGAAGACATATGT CTCCTTAGACCCTCGTTTATCCGTACGCTTCCTGCTCACGAGGGATCTAAGCCTTAAGGCCTCATACGCCCGGATGAATC AATACGTACATCAGATTAGCGAAAGTTATATGAGTCTCCCTACCGATATGTGGATGCCGGTCAGCAAGAAATTAAAACCA TTGGTGAGTGATCAAGTATCCGTTGGCGCTTATTACAATCTGCACAAGAACTATTCCTTCTCGGTGGAAGGTTATTACAA ATGGATGAATCACTTACTGGATTATAAAGATGGTTACAACTTCTTACCCTCGTTCGTCGGTTGGGAGGAGAAACTGGCCG CCGGTAAGGGGTGGGCCTATGGAGCGGAGTTTATCGCCCGGAAAGAGACGGGGCGTATAACAGGATGGATCGGATACGGA CTAATGTGGAGCGACCGGCAGTTCGACGAGATTAATAATGGCAAACGTTTCCCCGCGAAATACGATAACCGCCATAAGCT GAATATCGTCGCAAACTGGAAGATCAACGAGAAATTGGAACTAACAGGAAGCTGGACTTTCATGACCGGAAACCGGGTTA CGGTGGCATTCGAGAATTACGAGGATTTGGGCCTCACTCCTGTCCCTCCGCTCTTACCGGAAGGAGGCTTGGACTATTTC ACGGAGCGTAATAACGTACGTCTCCCCGCTTACCACCGCTTAGATCTGGGGATTAATATTTATCGACCTAAAAAGAACGG CCATCTCGGTATCTGGAATATCAGCGTATATAACGCTTATTGCCAGATGAACCCGATAACTATCCATAAGCGGTCTTGGA TAAACTACAGCCATTATTTCGAGACGTTATCGCTCTTACCGATCATTCCGTCTATATCATATACTTATAAATTCTAA
Upstream 100 bases:
>100_bases TATTACTCTCCAAAAATAAGAAAATATCGCAATAGTAACGTGAATTGTGATAGGGGTTTTTACTATCTTTCCTGTCTCGT AATAAAAAAGGAAGTACTTC
Downstream 100 bases:
>100_bases AGAACATGAAACCTATATTCTATTTATCAATCTTATTATCCAGCCTGCTCCTAACCTCCTGCTACAGGAAGTTTGACCTA GAGGAATATCGTACTACACC
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; NB-Dependent Receptor; Nb-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB Family Protein; Ferric Aerobactin Receptor; NB Dependent Outer Membrane Protein; NB Dependent/Ligand-Gated Channel; NB Dependent Receptor; NB Dependent Receptor Domain Protein; NB-Linked Outer Membrane Protein; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Receptor Protein; NB-Dependent Receptor Plug Domain Protein; Nb Family Protein; NB Dependent Receptor Domain-Containing Protein
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MKLILLIILIIFGFQSSAWGQAPTLSIEAKQEPIQEIMKKIEHQTGMTFSYDPSILKGISRITFKSDNQSISECLTRLFQ KLPLSYQINGTHIILKKLPRSVTISGFVRDKATTEYLIGASVYDSRTQRGTATNNHGFFSLTLPVGVVRLETSYIGYGRF SHTFQPLERDTVMEILLESGEALAEVVVTGSNDTQNPIQAPQMGTIKITRKMIKTIPTLFGEADVIKALQTQPGVSAGTE GLAGMYVRGGNGDENLYMIDGIQLYQVNHLGGLFSAFNAEALKDVDFYKSAFPARYGGRLSSVVDVHTKDGNMKEYHGSA MLGLTSGNLNFEGPIIKDRTSFNASFRRSWLDALSAPGLAIYNKIQKKKGEKFSARYAFTDLNLKVNHHINDRSQAYVNF YFGQDFLKGGSSEFSVGDNITPFENKDFGKMRWGNIALSSGWSYVFNNKMFGTVTLAYSHYQSKLKQETSQYYGTEGDKD YSSRFIETSTRNGINDFGVHANFDYIPTLAHHIRYGTDYLYHRFSPEYIEEKTSENLSPTKRTTGDERLSANELAVFAED DWAISPIVRANAGLRLNMYNIQKKTYVSLDPRLSVRFLLTRDLSLKASYARMNQYVHQISESYMSLPTDMWMPVSKKLKP LVSDQVSVGAYYNLHKNYSFSVEGYYKWMNHLLDYKDGYNFLPSFVGWEEKLAAGKGWAYGAEFIARKETGRITGWIGYG LMWSDRQFDEINNGKRFPAKYDNRHKLNIVANWKINEKLELTGSWTFMTGNRVTVAFENYEDLGLTPVPPLLPEGGLDYF TERNNVRLPAYHRLDLGINIYRPKKNGHLGIWNISVYNAYCQMNPITIHKRSWINYSHYFETLSLLPIIPSISYTYKF
Sequences:
>Translated_878_residues MKLILLIILIIFGFQSSAWGQAPTLSIEAKQEPIQEIMKKIEHQTGMTFSYDPSILKGISRITFKSDNQSISECLTRLFQ KLPLSYQINGTHIILKKLPRSVTISGFVRDKATTEYLIGASVYDSRTQRGTATNNHGFFSLTLPVGVVRLETSYIGYGRF SHTFQPLERDTVMEILLESGEALAEVVVTGSNDTQNPIQAPQMGTIKITRKMIKTIPTLFGEADVIKALQTQPGVSAGTE GLAGMYVRGGNGDENLYMIDGIQLYQVNHLGGLFSAFNAEALKDVDFYKSAFPARYGGRLSSVVDVHTKDGNMKEYHGSA MLGLTSGNLNFEGPIIKDRTSFNASFRRSWLDALSAPGLAIYNKIQKKKGEKFSARYAFTDLNLKVNHHINDRSQAYVNF YFGQDFLKGGSSEFSVGDNITPFENKDFGKMRWGNIALSSGWSYVFNNKMFGTVTLAYSHYQSKLKQETSQYYGTEGDKD YSSRFIETSTRNGINDFGVHANFDYIPTLAHHIRYGTDYLYHRFSPEYIEEKTSENLSPTKRTTGDERLSANELAVFAED DWAISPIVRANAGLRLNMYNIQKKTYVSLDPRLSVRFLLTRDLSLKASYARMNQYVHQISESYMSLPTDMWMPVSKKLKP LVSDQVSVGAYYNLHKNYSFSVEGYYKWMNHLLDYKDGYNFLPSFVGWEEKLAAGKGWAYGAEFIARKETGRITGWIGYG LMWSDRQFDEINNGKRFPAKYDNRHKLNIVANWKINEKLELTGSWTFMTGNRVTVAFENYEDLGLTPVPPLLPEGGLDYF TERNNVRLPAYHRLDLGINIYRPKKNGHLGIWNISVYNAYCQMNPITIHKRSWINYSHYFETLSLLPIIPSISYTYKF >Mature_878_residues MKLILLIILIIFGFQSSAWGQAPTLSIEAKQEPIQEIMKKIEHQTGMTFSYDPSILKGISRITFKSDNQSISECLTRLFQ KLPLSYQINGTHIILKKLPRSVTISGFVRDKATTEYLIGASVYDSRTQRGTATNNHGFFSLTLPVGVVRLETSYIGYGRF SHTFQPLERDTVMEILLESGEALAEVVVTGSNDTQNPIQAPQMGTIKITRKMIKTIPTLFGEADVIKALQTQPGVSAGTE GLAGMYVRGGNGDENLYMIDGIQLYQVNHLGGLFSAFNAEALKDVDFYKSAFPARYGGRLSSVVDVHTKDGNMKEYHGSA MLGLTSGNLNFEGPIIKDRTSFNASFRRSWLDALSAPGLAIYNKIQKKKGEKFSARYAFTDLNLKVNHHINDRSQAYVNF YFGQDFLKGGSSEFSVGDNITPFENKDFGKMRWGNIALSSGWSYVFNNKMFGTVTLAYSHYQSKLKQETSQYYGTEGDKD YSSRFIETSTRNGINDFGVHANFDYIPTLAHHIRYGTDYLYHRFSPEYIEEKTSENLSPTKRTTGDERLSANELAVFAED DWAISPIVRANAGLRLNMYNIQKKTYVSLDPRLSVRFLLTRDLSLKASYARMNQYVHQISESYMSLPTDMWMPVSKKLKP LVSDQVSVGAYYNLHKNYSFSVEGYYKWMNHLLDYKDGYNFLPSFVGWEEKLAAGKGWAYGAEFIARKETGRITGWIGYG LMWSDRQFDEINNGKRFPAKYDNRHKLNIVANWKINEKLELTGSWTFMTGNRVTVAFENYEDLGLTPVPPLLPEGGLDYF TERNNVRLPAYHRLDLGINIYRPKKNGHLGIWNISVYNAYCQMNPITIHKRSWINYSHYFETLSLLPIIPSISYTYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99800; Mature: 99800
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLILLIILIIFGFQSSAWGQAPTLSIEAKQEPIQEIMKKIEHQTGMTFSYDPSILKGIS CHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECHHHHHHHH RITFKSDNQSISECLTRLFQKLPLSYQINGTHIILKKLPRSVTISGFVRDKATTEYLIGA HEEECCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCEEEEEEEECCCCCEEEEEC SVYDSRTQRGTATNNHGFFSLTLPVGVVRLETSYIGYGRFSHTFQPLERDTVMEILLESG HHHCCCCCCCCCCCCCCEEEEEECEEEEEEEECEECCCCCCCCCCCCCHHHHHHHHHHCC EALAEVVVTGSNDTQNPIQAPQMGTIKITRKMIKTIPTLFGEADVIKALQTQPGVSAGTE CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC GLAGMYVRGGNGDENLYMIDGIQLYQVNHLGGLFSAFNAEALKDVDFYKSAFPARYGGRL CCCEEEEECCCCCCCEEEECCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCHHCCCCC SSVVDVHTKDGNMKEYHGSAMLGLTSGNLNFEGPIIKDRTSFNASFRRSWLDALSAPGLA CEEEEEEECCCCCHHCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCHH IYNKIQKKKGEKFSARYAFTDLNLKVNHHINDRSQAYVNFYFGQDFLKGGSSEFSVGDNI HHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCEEEEEEECHHHHCCCCCCCCCCCCC TPFENKDFGKMRWGNIALSSGWSYVFNNKMFGTVTLAYSHYQSKLKQETSQYYGTEGDKD CCCCCCCCCCEEECCEEEECCCEEEECCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCC YSSRFIETSTRNGINDFGVHANFDYIPTLAHHIRYGTDYLYHRFSPEYIEEKTSENLSPT HHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCC KRTTGDERLSANELAVFAEDDWAISPIVRANAGLRLNMYNIQKKTYVSLDPRLSVRFLLT CCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCEEEEEECCCEEEEEECCCCEEEEEEE RDLSLKASYARMNQYVHQISESYMSLPTDMWMPVSKKLKPLVSDQVSVGAYYNLHKNYSF ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECEEEEECCCEEE SVEGYYKWMNHLLDYKDGYNFLPSFVGWEEKLAAGKGWAYGAEFIARKETGRITGWIGYG EEHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHCCCCCCCCHHHHEECCCCCEEEEEECC LMWSDRQFDEINNGKRFPAKYDNRHKLNIVANWKINEKLELTGSWTFMTGNRVTVAFENY EEECCCCHHHCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEEEEECCEEEEEECCC EDLGLTPVPPLLPEGGLDYFTERNNVRLPAYHRLDLGINIYRPKKNGHLGIWNISVYNAY CCCCCCCCCCCCCCCCCCHHCCCCCEECCCEEEEECCEEEEECCCCCCEEEEEEEEEEEE CQMNPITIHKRSWINYSHYFETLSLLPIIPSISYTYKF EEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure MKLILLIILIIFGFQSSAWGQAPTLSIEAKQEPIQEIMKKIEHQTGMTFSYDPSILKGIS CHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECHHHHHHHH RITFKSDNQSISECLTRLFQKLPLSYQINGTHIILKKLPRSVTISGFVRDKATTEYLIGA HEEECCCCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCEEEEEEEECCCCCEEEEEC SVYDSRTQRGTATNNHGFFSLTLPVGVVRLETSYIGYGRFSHTFQPLERDTVMEILLESG HHHCCCCCCCCCCCCCCEEEEEECEEEEEEEECEECCCCCCCCCCCCCHHHHHHHHHHCC EALAEVVVTGSNDTQNPIQAPQMGTIKITRKMIKTIPTLFGEADVIKALQTQPGVSAGTE CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC GLAGMYVRGGNGDENLYMIDGIQLYQVNHLGGLFSAFNAEALKDVDFYKSAFPARYGGRL CCCEEEEECCCCCCCEEEECCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCHHCCCCC SSVVDVHTKDGNMKEYHGSAMLGLTSGNLNFEGPIIKDRTSFNASFRRSWLDALSAPGLA CEEEEEEECCCCCHHCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCHH IYNKIQKKKGEKFSARYAFTDLNLKVNHHINDRSQAYVNFYFGQDFLKGGSSEFSVGDNI HHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCEEEEEEECHHHHCCCCCCCCCCCCC TPFENKDFGKMRWGNIALSSGWSYVFNNKMFGTVTLAYSHYQSKLKQETSQYYGTEGDKD CCCCCCCCCCEEECCEEEECCCEEEECCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCC YSSRFIETSTRNGINDFGVHANFDYIPTLAHHIRYGTDYLYHRFSPEYIEEKTSENLSPT HHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCC KRTTGDERLSANELAVFAEDDWAISPIVRANAGLRLNMYNIQKKTYVSLDPRLSVRFLLT CCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCEEEEEECCCEEEEEECCCCEEEEEEE RDLSLKASYARMNQYVHQISESYMSLPTDMWMPVSKKLKPLVSDQVSVGAYYNLHKNYSF ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECEEEEECCCEEE SVEGYYKWMNHLLDYKDGYNFLPSFVGWEEKLAAGKGWAYGAEFIARKETGRITGWIGYG EEHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHCCCCCCCCHHHHEECCCCCEEEEEECC LMWSDRQFDEINNGKRFPAKYDNRHKLNIVANWKINEKLELTGSWTFMTGNRVTVAFENY EEECCCCHHHCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEEEEECCEEEEEECCC EDLGLTPVPPLLPEGGLDYFTERNNVRLPAYHRLDLGINIYRPKKNGHLGIWNISVYNAY CCCCCCCCCCCCCCCCCCHHCCCCCEECCCEEEEECCEEEEECCCCCCEEEEEEEEEEEE CQMNPITIHKRSWINYSHYFETLSLLPIIPSISYTYKF EEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA