| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is mutB [H]
Identifier: 150008907
GI number: 150008907
Start: 2696633
End: 2698780
Strand: Reverse
Name: mutB [H]
Synonym: BDI_2302
Alternate gene names: 150008907
Gene position: 2698780-2696633 (Counterclockwise)
Preceding gene: 150008908
Following gene: 150008906
Centisome position: 56.09
GC content: 48.65
Gene sequence:
>2148_bases ATGAGACCAAATTTTAAAAACATAGATATAAAGAATGCCGGATTCGCAGCTACAAACGCTGCCGAATGGGCAAAAGCCAA TGGTATCGAGCCCAATTGGAAAACACCCGAGCATATCGAGGTGAAACCTGTATATACAAAAGAAGACTTGGAGGGTATGG AGCACTTGAACTATGCTTCCGGTCTGCCTCCTTATCTACGTGGCCCGTACAGCGGTATGTACGCTATGCGTCCTTGGACA ATCCGTCAGTACGCGGGTTTCTCTACCGCTGAGGAGTCTAACGCTTTCTATCGCCGTAACTTGGCTTCCGGTCAGAAAGG TTTGTCCGTTGCGTTCGACCTTCCGACTCACCGTGGTTACGATGCCGACAACGAACGTGTGGTTGGTGATGTAGGTAAAG CGGGTGTATCTATCTGTTCCTTGGAGAACATGAAAGTGTTGTTCGATGGTATTCCTTTGAACAAGATGTCTGTTTCCATG ACCATGAATGGTGGTGTGCTTCCGGTATTGGCATTCTATATCAACGCAGGTTTGGAGCAAGGTGCTAAGTTGGAGGAAAT GGCCGGTACGATCCAGAACGATATATTGAAAGAGTTCATGGTACGTAATACCTATATTTACCCGCCTGAGTTCTCCATGA AGATTATCGCTGATATCTTCGAGTATACCTCTCAGAAGATGCCGAAGTTCAACTCTATCTCTATCTCCGGTTATCATATG CAGGAGGCTGGTGCTACGGCTGATATCGAGATGGCTTATACGTTGTGCGACGGTATGGAATATCTTCGTGCCGGTATCAA CGCCGGTATCGATGTGGATGCGTTCGCTCCCCGTTTGTCATTCTTCTGGGCTATCGGTGTAAATCACTTCATGGAGATCG CCAAGATGCGTGCGGCTCGTATGTTGTGGGCGAAGATCGTGAAGAGCTTCGGCGCTAAGAACCCGAAATCATTGGCATTG CGTACACATAGCCAGACTTCCGGTTGGTCATTGACCGAGCAAGATCCGTTCAATAACGTAGGACGTACTTGTATCGAGGC TATGGCCGCTACATTAGGACATACACAATCTTTGCATACGAACGCATTGGATGAGGCGATCGCTTTGCCGACCGATTTCT CCGCTCGTATCGCTCGTAATACACAGATTTACATTCAGGAAGAGACTAAGATCTGTAAGGAAATCGACCCGTGGGCTGGT TCTTACTATGTAGAGTCTTTGACGAATGAATTGGTACATAAAGGTTGGGCGTTGATCCAAGAGATCGAGAGCATGGGTGG TATGGCGAAAGCCATCGAGACAGGTCTTCCTAAGATGCGTATCGAGGAAGCGGCCGCTCGTACACAGGCTCGTATCGACT CAGGTGTTCAGACCATCGTTGGTGTTAACAAATATCGTTTGCCGAAGGAAGATCCGATCGATATCCTTGAGATTGATAAT ACAGCCGTACGTAACGAGCAGATCGCCGCTTTGAAGGAGTTGCGTGCTAACCGTGACGAAGCCGCTGTTCAAAAAGCTTT GGCTGATATCACGGAGTGCGTGAAGACGAAGAAGGGCAATTTATTAGAGTTGGCTGTTAAGGCTGCCGGCTTGCGTGCGT CATTGGGAGAGATCTCCGATGCTTGCGAGGTGGTTGTAGGTCGTTATAAAGCAATCATTAGAACTATTTCAGGCGTGTAT TCATCAGAAACTAAGAAAGACGCAGACTTCCAGAAAGCTTGCGAGCTTTGCGAGCAATTCGCTAAGAAAGAGGGCCGTCA GCCTCGTATCATGATCGCTAAGATGGGTCAGGACGGACATGACCGTGGCGCTAAGGTTGTTGCTACCGGTTATGCTGACT GTGGGTTCGACGTAGATATGGGACCGTTGTTCCAGACTCCGGCCGAGGCTGCCCGTCAAGCTGTAGAGAACGATGTTCAC GTAATGGGCGTTTCTTCTTTGGCCGCTGGTCATAAGACGTTGGTTCCGCAGGTTATCGAGGAGTTGAAGAAATTAGGTCG TGAGGATATCATCGTTATCGCTGGTGGTGTAATCCCGGCTCAAGACTATGACTTCTTGTATAAGGCTGGCGTTGCCGCTA TCTTTGGCCCGGGTACTTCCGTATCGAAGGCAGCTTGCCAGATCCTAGAGATCTTGTTAGGCGAATAA
Upstream 100 bases:
>100_bases GGCTCAAGGTATCGACCAGTTCGTAAATGTAAAGAGCAATGTGCTTGAGACATTGAAAGCATTCAACGCTAAATTAGGAA TCGCTTAAGTATAAACAATT
Downstream 100 bases:
>100_bases ATAGCGTTTAAACCTTGCGGTTTTTTAATAAAGAGAGGCTGGACAATTGATTTTGTCCGGCCTTTTTTAGTATTGTATAC GGGTTTATGTACTTTTGTAG
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-alpha [H]
Number of amino acids: Translated: 715; Mature: 715
Protein sequence:
>715_residues MRPNFKNIDIKNAGFAATNAAEWAKANGIEPNWKTPEHIEVKPVYTKEDLEGMEHLNYASGLPPYLRGPYSGMYAMRPWT IRQYAGFSTAEESNAFYRRNLASGQKGLSVAFDLPTHRGYDADNERVVGDVGKAGVSICSLENMKVLFDGIPLNKMSVSM TMNGGVLPVLAFYINAGLEQGAKLEEMAGTIQNDILKEFMVRNTYIYPPEFSMKIIADIFEYTSQKMPKFNSISISGYHM QEAGATADIEMAYTLCDGMEYLRAGINAGIDVDAFAPRLSFFWAIGVNHFMEIAKMRAARMLWAKIVKSFGAKNPKSLAL RTHSQTSGWSLTEQDPFNNVGRTCIEAMAATLGHTQSLHTNALDEAIALPTDFSARIARNTQIYIQEETKICKEIDPWAG SYYVESLTNELVHKGWALIQEIESMGGMAKAIETGLPKMRIEEAAARTQARIDSGVQTIVGVNKYRLPKEDPIDILEIDN TAVRNEQIAALKELRANRDEAAVQKALADITECVKTKKGNLLELAVKAAGLRASLGEISDACEVVVGRYKAIIRTISGVY SSETKKDADFQKACELCEQFAKKEGRQPRIMIAKMGQDGHDRGAKVVATGYADCGFDVDMGPLFQTPAEAARQAVENDVH VMGVSSLAAGHKTLVPQVIEELKKLGREDIIVIAGGVIPAQDYDFLYKAGVAAIFGPGTSVSKAACQILEILLGE
Sequences:
>Translated_715_residues MRPNFKNIDIKNAGFAATNAAEWAKANGIEPNWKTPEHIEVKPVYTKEDLEGMEHLNYASGLPPYLRGPYSGMYAMRPWT IRQYAGFSTAEESNAFYRRNLASGQKGLSVAFDLPTHRGYDADNERVVGDVGKAGVSICSLENMKVLFDGIPLNKMSVSM TMNGGVLPVLAFYINAGLEQGAKLEEMAGTIQNDILKEFMVRNTYIYPPEFSMKIIADIFEYTSQKMPKFNSISISGYHM QEAGATADIEMAYTLCDGMEYLRAGINAGIDVDAFAPRLSFFWAIGVNHFMEIAKMRAARMLWAKIVKSFGAKNPKSLAL RTHSQTSGWSLTEQDPFNNVGRTCIEAMAATLGHTQSLHTNALDEAIALPTDFSARIARNTQIYIQEETKICKEIDPWAG SYYVESLTNELVHKGWALIQEIESMGGMAKAIETGLPKMRIEEAAARTQARIDSGVQTIVGVNKYRLPKEDPIDILEIDN TAVRNEQIAALKELRANRDEAAVQKALADITECVKTKKGNLLELAVKAAGLRASLGEISDACEVVVGRYKAIIRTISGVY SSETKKDADFQKACELCEQFAKKEGRQPRIMIAKMGQDGHDRGAKVVATGYADCGFDVDMGPLFQTPAEAARQAVENDVH VMGVSSLAAGHKTLVPQVIEELKKLGREDIIVIAGGVIPAQDYDFLYKAGVAAIFGPGTSVSKAACQILEILLGE >Mature_715_residues MRPNFKNIDIKNAGFAATNAAEWAKANGIEPNWKTPEHIEVKPVYTKEDLEGMEHLNYASGLPPYLRGPYSGMYAMRPWT IRQYAGFSTAEESNAFYRRNLASGQKGLSVAFDLPTHRGYDADNERVVGDVGKAGVSICSLENMKVLFDGIPLNKMSVSM TMNGGVLPVLAFYINAGLEQGAKLEEMAGTIQNDILKEFMVRNTYIYPPEFSMKIIADIFEYTSQKMPKFNSISISGYHM QEAGATADIEMAYTLCDGMEYLRAGINAGIDVDAFAPRLSFFWAIGVNHFMEIAKMRAARMLWAKIVKSFGAKNPKSLAL RTHSQTSGWSLTEQDPFNNVGRTCIEAMAATLGHTQSLHTNALDEAIALPTDFSARIARNTQIYIQEETKICKEIDPWAG SYYVESLTNELVHKGWALIQEIESMGGMAKAIETGLPKMRIEEAAARTQARIDSGVQTIVGVNKYRLPKEDPIDILEIDN TAVRNEQIAALKELRANRDEAAVQKALADITECVKTKKGNLLELAVKAAGLRASLGEISDACEVVVGRYKAIIRTISGVY SSETKKDADFQKACELCEQFAKKEGRQPRIMIAKMGQDGHDRGAKVVATGYADCGFDVDMGPLFQTPAEAARQAVENDVH VMGVSSLAAGHKTLVPQVIEELKKLGREDIIVIAGGVIPAQDYDFLYKAGVAAIFGPGTSVSKAACQILEILLGE
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=698, Percent_Identity=62.4641833810888, Blast_Score=908, Evalue=0.0, Organism=Escherichia coli, GI1789284, Length=683, Percent_Identity=63.6896046852123, Blast_Score=881, Evalue=0.0, Organism=Caenorhabditis elegans, GI25144500, Length=683, Percent_Identity=63.8360175695461, Blast_Score=900, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 78370; Mature: 78370
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00544 METMALONYL_COA_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPNFKNIDIKNAGFAATNAAEWAKANGIEPNWKTPEHIEVKPVYTKEDLEGMEHLNYAS CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHC GLPPYLRGPYSGMYAMRPWTIRQYAGFSTAEESNAFYRRNLASGQKGLSVAFDLPTHRGY CCCHHHCCCCCCEEEECCEEHHHHCCCCCCHHCCHHHHHHHCCCCCCCEEEEECCCCCCC DADNERVVGDVGKAGVSICSLENMKVLFDGIPLNKMSVSMTMNGGVLPVLAFYINAGLEQ CCCCCEEECCCCCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHC GAKLEEMAGTIQNDILKEFMVRNTYIYPPEFSMKIIADIFEYTSQKMPKFNSISISGYHM CCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEE QEAGATADIEMAYTLCDGMEYLRAGINAGIDVDAFAPRLSFFWAIGVNHFMEIAKMRAAR CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLWAKIVKSFGAKNPKSLALRTHSQTSGWSLTEQDPFNNVGRTCIEAMAATLGHTQSLHT HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH NALDEAIALPTDFSARIARNTQIYIQEETKICKEIDPWAGSYYVESLTNELVHKGWALIQ HHHHHHHCCCCCCHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH EIESMGGMAKAIETGLPKMRIEEAAARTQARIDSGVQTIVGVNKYRLPKEDPIDILEIDN HHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC TAVRNEQIAALKELRANRDEAAVQKALADITECVKTKKGNLLELAVKAAGLRASLGEISD CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCHHHHHHHHHH ACEVVVGRYKAIIRTISGVYSSETKKDADFQKACELCEQFAKKEGRQPRIMIAKMGQDGH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC DRGAKVVATGYADCGFDVDMGPLFQTPAEAARQAVENDVHVMGVSSLAAGHKTLVPQVIE CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHH ELKKLGREDIIVIAGGVIPAQDYDFLYKAGVAAIFGPGTSVSKAACQILEILLGE HHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRPNFKNIDIKNAGFAATNAAEWAKANGIEPNWKTPEHIEVKPVYTKEDLEGMEHLNYAS CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHC GLPPYLRGPYSGMYAMRPWTIRQYAGFSTAEESNAFYRRNLASGQKGLSVAFDLPTHRGY CCCHHHCCCCCCEEEECCEEHHHHCCCCCCHHCCHHHHHHHCCCCCCCEEEEECCCCCCC DADNERVVGDVGKAGVSICSLENMKVLFDGIPLNKMSVSMTMNGGVLPVLAFYINAGLEQ CCCCCEEECCCCCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHC GAKLEEMAGTIQNDILKEFMVRNTYIYPPEFSMKIIADIFEYTSQKMPKFNSISISGYHM CCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEE QEAGATADIEMAYTLCDGMEYLRAGINAGIDVDAFAPRLSFFWAIGVNHFMEIAKMRAAR CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLWAKIVKSFGAKNPKSLALRTHSQTSGWSLTEQDPFNNVGRTCIEAMAATLGHTQSLHT HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH NALDEAIALPTDFSARIARNTQIYIQEETKICKEIDPWAGSYYVESLTNELVHKGWALIQ HHHHHHHCCCCCCHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH EIESMGGMAKAIETGLPKMRIEEAAARTQARIDSGVQTIVGVNKYRLPKEDPIDILEIDN HHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC TAVRNEQIAALKELRANRDEAAVQKALADITECVKTKKGNLLELAVKAAGLRASLGEISD CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCHHHHHHHHHH ACEVVVGRYKAIIRTISGVYSSETKKDADFQKACELCEQFAKKEGRQPRIMIAKMGQDGH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC DRGAKVVATGYADCGFDVDMGPLFQTPAEAARQAVENDVHVMGVSSLAAGHKTLVPQVIE CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHH ELKKLGREDIIVIAGGVIPAQDYDFLYKAGVAAIFGPGTSVSKAACQILEILLGE HHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566763; 12949112 [H]