Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150008864

Identifier: 150008864

GI number: 150008864

Start: 2644689

End: 2645243

Strand: Direct

Name: 150008864

Synonym: BDI_2254

Alternate gene names: NA

Gene position: 2644689-2645243 (Clockwise)

Preceding gene: 150008863

Following gene: 150008865

Centisome position: 54.97

GC content: 45.59

Gene sequence:

>555_bases
ATGAACGAACAGATACAACAAATCGCAGAGCGTCTGGCCGGATTACGGGACGCACTGGAGATTACGCCGGAAGAAATGGC
AAAGGTCTGCAACCTCACGACTGAGCAATATTTGCTGCTGGAAAGCGGCACGGTTGATATTTCCGTTAGCGTATTGCACC
AGATCTCACAGGCTTATGGCGTAGAATTAACCACGTTGATGTTTGGCGACGAGCCTAAAATGAGTACGTACTTTATTACT
CGTAACGGAAAAGGTGTTGCCGTAGAGCGTACGAAAGCCTATAAGTACCAATCATTGGCCGCCGGTTTCGTCGGACGTAA
AGCGGACCCCTTCTTGGTAACCGTACATCCCAAACCAGAGGATGAGCCGATGTATCTCAATTCCCATCCGGGGCAAGAAT
ACAATATGGTATTAAAAGGACGTCTGTTACTACAGATCAACAATAAAGATCTTATCTTAGAAGAAGGTGATAGTATTTAT
TTTAACTCAGAGCTTCCTCACGGTATGAAAGCGCTGGATGGGGAAAAGGTCAGTTTCTTGGCCGTCATTTTATAA

Upstream 100 bases:

>100_bases
TATCCATACCTGTTAATTAGAAAAGAAAACAAGGGCTTTCACCTTCTTTTTGCTTTTTATTCCTATCTTTGGAGCGACAT
AATACAATAACTTCAGCAAA

Downstream 100 bases:

>100_bases
ACGATCAACAGCATGTTAGAAAGATTTATAGATAAAACGACGTTTGAGTCGCAAGAAGATTTTATTAAAAACTTCAAGAT
CAAGGTTCCGGAGAACTTCA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; MerR Family Transcriptional Regulator; Transcription Regulator; Phosphate Butyryltransferase; Cupin Domain-Containing Protein; Helix-Turn-Helix Transcriptional Regulator PuuR; Transcriptional Regulator MerR Family; Cupin Sensor Transcriptional Regulator; Transcriptional Regulator-Like Protein; HTH-Type Transcriptional Regulator; XRE Family-Like Protein; Transcriptional Regulator XRE Family With Cupin Sensor; Transcriptional Regulator With Cupin Domain; Epoxidase; Cupin 2 Barrel Domain-Containing Protein; Helix-Turn-Helix Domain-Containing Protein; Regulatory Protein; Helix-Turn-Helix Domain Protein; Cupin 2 Conserved Barrel Domain Protein; Phosphotransbutyrylase; Helix-Turn-Helix Family Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYGVELTTLMFGDEPKMSTYFIT
RNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPEDEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIY
FNSELPHGMKALDGEKVSFLAVIL

Sequences:

>Translated_184_residues
MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYGVELTTLMFGDEPKMSTYFIT
RNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPEDEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIY
FNSELPHGMKALDGEKVSFLAVIL
>Mature_184_residues
MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYGVELTTLMFGDEPKMSTYFIT
RNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPEDEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIY
FNSELPHGMKALDGEKVSFLAVIL

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20582; Mature: 20582

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYG
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHC
VELTTLMFGDEPKMSTYFITRNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPE
CEEEEEEECCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
DEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIYFNSELPHGMKALDGEKVSFL
CCCEEEECCCCCCEEEEEEEEEEEEECCCEEEEECCCEEEECCCCCCCCHHCCCCCEEEE
AVIL
EEEC
>Mature Secondary Structure
MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYG
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHC
VELTTLMFGDEPKMSTYFITRNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPE
CEEEEEEECCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
DEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIYFNSELPHGMKALDGEKVSFL
CCCEEEECCCCCCEEEEEEEEEEEEECCCEEEEECCCEEEECCCCCCCCHHCCCCCEEEE
AVIL
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA