| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008864
Identifier: 150008864
GI number: 150008864
Start: 2644689
End: 2645243
Strand: Direct
Name: 150008864
Synonym: BDI_2254
Alternate gene names: NA
Gene position: 2644689-2645243 (Clockwise)
Preceding gene: 150008863
Following gene: 150008865
Centisome position: 54.97
GC content: 45.59
Gene sequence:
>555_bases ATGAACGAACAGATACAACAAATCGCAGAGCGTCTGGCCGGATTACGGGACGCACTGGAGATTACGCCGGAAGAAATGGC AAAGGTCTGCAACCTCACGACTGAGCAATATTTGCTGCTGGAAAGCGGCACGGTTGATATTTCCGTTAGCGTATTGCACC AGATCTCACAGGCTTATGGCGTAGAATTAACCACGTTGATGTTTGGCGACGAGCCTAAAATGAGTACGTACTTTATTACT CGTAACGGAAAAGGTGTTGCCGTAGAGCGTACGAAAGCCTATAAGTACCAATCATTGGCCGCCGGTTTCGTCGGACGTAA AGCGGACCCCTTCTTGGTAACCGTACATCCCAAACCAGAGGATGAGCCGATGTATCTCAATTCCCATCCGGGGCAAGAAT ACAATATGGTATTAAAAGGACGTCTGTTACTACAGATCAACAATAAAGATCTTATCTTAGAAGAAGGTGATAGTATTTAT TTTAACTCAGAGCTTCCTCACGGTATGAAAGCGCTGGATGGGGAAAAGGTCAGTTTCTTGGCCGTCATTTTATAA
Upstream 100 bases:
>100_bases TATCCATACCTGTTAATTAGAAAAGAAAACAAGGGCTTTCACCTTCTTTTTGCTTTTTATTCCTATCTTTGGAGCGACAT AATACAATAACTTCAGCAAA
Downstream 100 bases:
>100_bases ACGATCAACAGCATGTTAGAAAGATTTATAGATAAAACGACGTTTGAGTCGCAAGAAGATTTTATTAAAAACTTCAAGAT CAAGGTTCCGGAGAACTTCA
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; MerR Family Transcriptional Regulator; Transcription Regulator; Phosphate Butyryltransferase; Cupin Domain-Containing Protein; Helix-Turn-Helix Transcriptional Regulator PuuR; Transcriptional Regulator MerR Family; Cupin Sensor Transcriptional Regulator; Transcriptional Regulator-Like Protein; HTH-Type Transcriptional Regulator; XRE Family-Like Protein; Transcriptional Regulator XRE Family With Cupin Sensor; Transcriptional Regulator With Cupin Domain; Epoxidase; Cupin 2 Barrel Domain-Containing Protein; Helix-Turn-Helix Domain-Containing Protein; Regulatory Protein; Helix-Turn-Helix Domain Protein; Cupin 2 Conserved Barrel Domain Protein; Phosphotransbutyrylase; Helix-Turn-Helix Family Protein
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYGVELTTLMFGDEPKMSTYFIT RNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPEDEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIY FNSELPHGMKALDGEKVSFLAVIL
Sequences:
>Translated_184_residues MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYGVELTTLMFGDEPKMSTYFIT RNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPEDEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIY FNSELPHGMKALDGEKVSFLAVIL >Mature_184_residues MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYGVELTTLMFGDEPKMSTYFIT RNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPEDEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIY FNSELPHGMKALDGEKVSFLAVIL
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20582; Mature: 20582
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYG CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHC VELTTLMFGDEPKMSTYFITRNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPE CEEEEEEECCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC DEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIYFNSELPHGMKALDGEKVSFL CCCEEEECCCCCCEEEEEEEEEEEEECCCEEEEECCCEEEECCCCCCCCHHCCCCCEEEE AVIL EEEC >Mature Secondary Structure MNEQIQQIAERLAGLRDALEITPEEMAKVCNLTTEQYLLLESGTVDISVSVLHQISQAYG CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHC VELTTLMFGDEPKMSTYFITRNGKGVAVERTKAYKYQSLAAGFVGRKADPFLVTVHPKPE CEEEEEEECCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC DEPMYLNSHPGQEYNMVLKGRLLLQINNKDLILEEGDSIYFNSELPHGMKALDGEKVSFL CCCEEEECCCCCCEEEEEEEEEEEEECCCEEEEECCCEEEECCCCCCCCHHCCCCCEEEE AVIL EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA