| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is ptpA [H]
Identifier: 150008856
GI number: 150008856
Start: 2632704
End: 2634938
Strand: Direct
Name: ptpA [H]
Synonym: BDI_2246
Alternate gene names: 150008856
Gene position: 2632704-2634938 (Clockwise)
Preceding gene: 150008852
Following gene: 150008857
Centisome position: 54.72
GC content: 47.38
Gene sequence:
>2235_bases ATGAAACTAAATAAATTAATAGCGATCGCCACGATCAGCCTTCTGTCGGGAGGTATAAGCATGGCACAAAAAGCGTTGAA TCTTGAGGATATCGTTGCCGGTAACGTCATACAAACAAAAGGCATCGGAAGCATGACTTGGCTAAAAGACGGTGAACGTT ATAGCCGCTTGGAAAATAATAAGCAAACCGGAGGCACGGATATCGTCGCCTATCAAGCAAAAGATAACTCCCGTGAAGTC ATTATCCCCTCATCCCTATTGACAGACAAATCTACAGGAAAGCCTATTCCCGCACGTAGTATCTCTTGGAGTGCGGATAA TGAGAAAGTCTTGATTTATAACAATACCCAACGGGTATGGCGTTATGATACCCGGGGTGACTATTGGGTATTAAACCTAA AGGACGGCGCTTTACGTCAATTGGGAAAAGGAATGCCGGAATCCTCCATGATGTTCGCTAAATTCTCTCCGGATGGCACA CGTGTGGCCTATGTTTCCAACAATAATATATATGTAGAAGATATAGACTCCGGGAAAATCACGCAGCTAACAAAAGACGG AAGCGATACGATTGTCAACGGAACTTTCGATTGGGTATATGAGGAGGAGTTCAGTTGCCGGGATGGTTTCCGCTGGAGCC CGGACGGAAAGCATATCGCCTATTGGCAAAGCGATACGAAAGGAACGGGAGTGTTCGACATTATTAATAATGTAGACTCC ATCTACGCAAAGGTAATCCATTTCCCATACCCCAAGGCAGGAACCACCAATTCAGCCGTAAAAGTAGGCTACGTTTCCTC TACCGGCGGGAACACCACTTGGATCGCCATACCCGGAGATCCCCGGAACAACTACCTGCCCCGTATGGAATTCATCCCCG AAAGCGACGAGTTGTTCATACAGCAACTAAACCGCCCGCAGAATACAAATAAGGTATGGATCGCCAAGATATCCGATAAC TCGCTGAATAATATCTTCACTGATACGGATGCCGCATGGCTGGACACGAATGATAACATACAATGGTTAAAGGACAACCG CTATTTCACATGGGAAAGCGAGCGTAGTGGCTGGCGACACTTATACCGGATAAGCCGGGACGGAAAAGAGATACAACCCA TCACCAAAGGTGATTTTGATTATATCTCGCCGGTCGGGACCGATCTACAAAAGGGCTGGGTCTATTTCATCGCCTCCCCG GACAATTTCACCCAACGTTACTTGTACCGGGCTAAAGCATTCGGCAATGGGGAAGTGGAGCGTGTAAGCCCCATGGAACA ATCCGGACAGCACCGCTACAATATGTCACCCACCGGCAAATGGGCCATACATACGTATAGTAACGCCTCTACCCCATCCG TTATCGACATGGTTTCTTTCCCGAAACATCAATCCGTACGCATGCTTGAGGATAATGCCCAAGCCAAGGACCAATACGCC GCCTTAGGATTAAACCCGAAAGAATTTATCAAGGTCAAGTCCGGCAATCTAACCTTGGACGCATGGATGATAAAACCTGT CGATTTCGACGCATCCAAGAAATACCCGGTTATCATAGAGGTATACGGCGAGCCGGCGAGCGCCACCGTACAAGATGTAT GGGGTAACGGAGATTTATGGCAACAATATATGGCGAACCAAGGTTATATCGTGGTAAGTATCGAGAACCGGGGTGCGAAT ACTCCCCGTGGACGTGAATGGCGGAAATGTATTTACGGGGAAGTGGGTACTTTCGCTTCCGAAGACCAGAGCAGGGGTAT TCTGGATATGACCCGTCAATATCCGTTTATCGATGCCAACAGGATCGGTATTACCGGATGGAGCGGTGGTGGTAGCCAGA CCTTAAACTGCATGTTCCGTTATCCGAAAATATTCCATACTGGTATAGCGATCGCTTTTGTAGCCGACCAACGTTTATAC GACACGATCTACCAAGAACGTTACATGAATACTCCGCAGAACAATCCGGAAGGCTACCACAAAGGTTCCCCGATTACCTA TGCCGAGGGACTGGAAGGTAATCTGCTGCTTATTCATGGTACGGGAGATGATAACGTGCATTACCAAAATTGCGAGATGC TGGTGAACAAGTTGATCAAGAACGGAAAGATGTTTACGCAAATCAGTTACCCGATGCGTAGCCATAGCATCAACGAAAGG GAAGGAACAACTCTTCACCTACGTAAGACAATGGCTAAATACTGGCTGGAACATCTTCCGGCCGGTGGTAAATAG
Upstream 100 bases:
>100_bases TTATTCTTGATTTCCGAGGCGCGAATATACAAATCCATTTTGTTATATCAACTAACTTTCCGTTCTTTGCATAAATATAG TAGTAACCAACTAATACAAC
Downstream 100 bases:
>100_bases TTAATCCACGATTCGATGAAACAATTTTTATTGCGATTAGTGATCTTGGCAGGAATCAGTTTCCTGCCAACGGTGTCCAA CGCCCAATTAAGGGAAAAGG
Product: dipeptidyl aminopeptidase
Products: NA
Alternate protein names: PTP; Prolyl tripeptidyl peptidase A [H]
Number of amino acids: Translated: 744; Mature: 744
Protein sequence:
>744_residues MKLNKLIAIATISLLSGGISMAQKALNLEDIVAGNVIQTKGIGSMTWLKDGERYSRLENNKQTGGTDIVAYQAKDNSREV IIPSSLLTDKSTGKPIPARSISWSADNEKVLIYNNTQRVWRYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGT RVAYVSNNNIYVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTGVFDIINNVDS IYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRMEFIPESDELFIQQLNRPQNTNKVWIAKISDN SLNNIFTDTDAAWLDTNDNIQWLKDNRYFTWESERSGWRHLYRISRDGKEIQPITKGDFDYISPVGTDLQKGWVYFIASP DNFTQRYLYRAKAFGNGEVERVSPMEQSGQHRYNMSPTGKWAIHTYSNASTPSVIDMVSFPKHQSVRMLEDNAQAKDQYA ALGLNPKEFIKVKSGNLTLDAWMIKPVDFDASKKYPVIIEVYGEPASATVQDVWGNGDLWQQYMANQGYIVVSIENRGAN TPRGREWRKCIYGEVGTFASEDQSRGILDMTRQYPFIDANRIGITGWSGGGSQTLNCMFRYPKIFHTGIAIAFVADQRLY DTIYQERYMNTPQNNPEGYHKGSPITYAEGLEGNLLLIHGTGDDNVHYQNCEMLVNKLIKNGKMFTQISYPMRSHSINER EGTTLHLRKTMAKYWLEHLPAGGK
Sequences:
>Translated_744_residues MKLNKLIAIATISLLSGGISMAQKALNLEDIVAGNVIQTKGIGSMTWLKDGERYSRLENNKQTGGTDIVAYQAKDNSREV IIPSSLLTDKSTGKPIPARSISWSADNEKVLIYNNTQRVWRYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGT RVAYVSNNNIYVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTGVFDIINNVDS IYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRMEFIPESDELFIQQLNRPQNTNKVWIAKISDN SLNNIFTDTDAAWLDTNDNIQWLKDNRYFTWESERSGWRHLYRISRDGKEIQPITKGDFDYISPVGTDLQKGWVYFIASP DNFTQRYLYRAKAFGNGEVERVSPMEQSGQHRYNMSPTGKWAIHTYSNASTPSVIDMVSFPKHQSVRMLEDNAQAKDQYA ALGLNPKEFIKVKSGNLTLDAWMIKPVDFDASKKYPVIIEVYGEPASATVQDVWGNGDLWQQYMANQGYIVVSIENRGAN TPRGREWRKCIYGEVGTFASEDQSRGILDMTRQYPFIDANRIGITGWSGGGSQTLNCMFRYPKIFHTGIAIAFVADQRLY DTIYQERYMNTPQNNPEGYHKGSPITYAEGLEGNLLLIHGTGDDNVHYQNCEMLVNKLIKNGKMFTQISYPMRSHSINER EGTTLHLRKTMAKYWLEHLPAGGK >Mature_744_residues MKLNKLIAIATISLLSGGISMAQKALNLEDIVAGNVIQTKGIGSMTWLKDGERYSRLENNKQTGGTDIVAYQAKDNSREV IIPSSLLTDKSTGKPIPARSISWSADNEKVLIYNNTQRVWRYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGT RVAYVSNNNIYVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTGVFDIINNVDS IYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRMEFIPESDELFIQQLNRPQNTNKVWIAKISDN SLNNIFTDTDAAWLDTNDNIQWLKDNRYFTWESERSGWRHLYRISRDGKEIQPITKGDFDYISPVGTDLQKGWVYFIASP DNFTQRYLYRAKAFGNGEVERVSPMEQSGQHRYNMSPTGKWAIHTYSNASTPSVIDMVSFPKHQSVRMLEDNAQAKDQYA ALGLNPKEFIKVKSGNLTLDAWMIKPVDFDASKKYPVIIEVYGEPASATVQDVWGNGDLWQQYMANQGYIVVSIENRGAN TPRGREWRKCIYGEVGTFASEDQSRGILDMTRQYPFIDANRIGITGWSGGGSQTLNCMFRYPKIFHTGIAIAFVADQRLY DTIYQERYMNTPQNNPEGYHKGSPITYAEGLEGNLLLIHGTGDDNVHYQNCEMLVNKLIKNGKMFTQISYPMRSHSINER EGTTLHLRKTMAKYWLEHLPAGGK
Specific function: Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1' position [H]
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI16933540, Length=747, Percent_Identity=26.2382864792503, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI18765694, Length=711, Percent_Identity=28.9732770745429, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI85787627, Length=678, Percent_Identity=24.6312684365782, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI295842403, Length=678, Percent_Identity=24.6312684365782, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI295849272, Length=674, Percent_Identity=24.6290801186944, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI295842359, Length=678, Percent_Identity=24.6312684365782, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI52426756, Length=678, Percent_Identity=24.6312684365782, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI37577089, Length=683, Percent_Identity=25.7686676427526, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI18450280, Length=683, Percent_Identity=25.7686676427526, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI86792778, Length=678, Percent_Identity=24.188790560472, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI86792774, Length=678, Percent_Identity=24.188790560472, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI86792863, Length=678, Percent_Identity=24.188790560472, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI194394146, Length=696, Percent_Identity=24.8563218390805, Blast_Score=167, Evalue=5e-41, Organism=Homo sapiens, GI37577091, Length=683, Percent_Identity=23.4260614934114, Blast_Score=119, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17508019, Length=243, Percent_Identity=37.4485596707819, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17508017, Length=243, Percent_Identity=37.4485596707819, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17550672, Length=670, Percent_Identity=24.6268656716418, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17564632, Length=627, Percent_Identity=25.0398724082935, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17564634, Length=627, Percent_Identity=25.0398724082935, Blast_Score=129, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6321817, Length=685, Percent_Identity=27.2992700729927, Blast_Score=223, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6324793, Length=734, Percent_Identity=24.9318801089918, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI45551969, Length=689, Percent_Identity=25.8345428156749, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI45550825, Length=689, Percent_Identity=25.8345428156749, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI45553511, Length=689, Percent_Identity=25.8345428156749, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI17933704, Length=760, Percent_Identity=25.5263157894737, Blast_Score=182, Evalue=9e-46, Organism=Drosophila melanogaster, GI161083744, Length=760, Percent_Identity=25.5263157894737, Blast_Score=182, Evalue=9e-46, Organism=Drosophila melanogaster, GI221331178, Length=760, Percent_Identity=25.5263157894737, Blast_Score=182, Evalue=1e-45, Organism=Drosophila melanogaster, GI24582032, Length=660, Percent_Identity=26.0606060606061, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI24582257, Length=285, Percent_Identity=30.8771929824561, Blast_Score=126, Evalue=7e-29, Organism=Drosophila melanogaster, GI45551475, Length=227, Percent_Identity=28.6343612334802, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI221372263, Length=227, Percent_Identity=28.6343612334802, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI221372266, Length=227, Percent_Identity=28.6343612334802, Blast_Score=85, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001375 - InterPro: IPR002469 [H]
Pfam domain/function: PF00930 DPPIV_N; PF00326 Peptidase_S9 [H]
EC number: =3.4.14.12 [H]
Molecular weight: Translated: 84194; Mature: 84194
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNKLIAIATISLLSGGISMAQKALNLEDIVAGNVIQTKGIGSMTWLKDGERYSRLENN CCCHHEEHHHHHHHHHCCHHHHHHHCCHHHHHCCCEEEECCCCCEEEECCCHHHHHHCCC KQTGGTDIVAYQAKDNSREVIIPSSLLTDKSTGKPIPARSISWSADNEKVLIYNNTQRVW CCCCCCEEEEEEECCCCCEEEECHHHCCCCCCCCCCCCCCEEECCCCCEEEEEECCCEEE RYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGTRVAYVSNNNIYVEDIDSGKI EECCCCCEEEEEECCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCCE TQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTGVFDIINNVDS EEEECCCCCEEEECEEEEEECCCCCCCCCCEECCCCCEEEEEECCCCCCCHHHHHHHHHH IYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRMEFIPESDELFI HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCHHHHH QQLNRPQNTNKVWIAKISDNSLNNIFTDTDAAWLDTNDNIQWLKDNRYFTWESERSGWRH HHHCCCCCCCEEEEEEECCCCCCCEECCCCCEEEECCCCEEEEECCEEEEECCCCCCCHH LYRISRDGKEIQPITKGDFDYISPVGTDLQKGWVYFIASPDNFTQRYLYRAKAFGNGEVE HHEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCE RVSPMEQSGQHRYNMSPTGKWAIHTYSNASTPSVIDMVSFPKHQSVRMLEDNAQAKDQYA ECCCHHHCCCEEECCCCCCCEEEEEECCCCCCCEEEHHCCCCCCCEEEECCCCCCCCCEE ALGLNPKEFIKVKSGNLTLDAWMIKPVDFDASKKYPVIIEVYGEPASATVQDVWGNGDLW EECCCHHHEEEEECCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEECCCCCHHH QQYMANQGYIVVSIENRGANTPRGREWRKCIYGEVGTFASEDQSRGILDMTRQYPFIDAN HHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCC RIGITGWSGGGSQTLNCMFRYPKIFHTGIAIAFVADQRLYDTIYQERYMNTPQNNPEGYH CEEEEEECCCCCCEEEEEEECCHHHHCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCC KGSPITYAEGLEGNLLLIHGTGDDNVHYQNCEMLVNKLIKNGKMFTQISYPMRSHSINER CCCCEEEECCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCC EGTTLHLRKTMAKYWLEHLPAGGK CCCEEEHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLNKLIAIATISLLSGGISMAQKALNLEDIVAGNVIQTKGIGSMTWLKDGERYSRLENN CCCHHEEHHHHHHHHHCCHHHHHHHCCHHHHHCCCEEEECCCCCEEEECCCHHHHHHCCC KQTGGTDIVAYQAKDNSREVIIPSSLLTDKSTGKPIPARSISWSADNEKVLIYNNTQRVW CCCCCCEEEEEEECCCCCEEEECHHHCCCCCCCCCCCCCCEEECCCCCEEEEEECCCEEE RYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGTRVAYVSNNNIYVEDIDSGKI EECCCCCEEEEEECCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCCE TQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTGVFDIINNVDS EEEECCCCCEEEECEEEEEECCCCCCCCCCEECCCCCEEEEEECCCCCCCHHHHHHHHHH IYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRMEFIPESDELFI HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCHHHHH QQLNRPQNTNKVWIAKISDNSLNNIFTDTDAAWLDTNDNIQWLKDNRYFTWESERSGWRH HHHCCCCCCCEEEEEEECCCCCCCEECCCCCEEEECCCCEEEEECCEEEEECCCCCCCHH LYRISRDGKEIQPITKGDFDYISPVGTDLQKGWVYFIASPDNFTQRYLYRAKAFGNGEVE HHEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCE RVSPMEQSGQHRYNMSPTGKWAIHTYSNASTPSVIDMVSFPKHQSVRMLEDNAQAKDQYA ECCCHHHCCCEEECCCCCCCEEEEEECCCCCCCEEEHHCCCCCCCEEEECCCCCCCCCEE ALGLNPKEFIKVKSGNLTLDAWMIKPVDFDASKKYPVIIEVYGEPASATVQDVWGNGDLW EECCCHHHEEEEECCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEECCCCCHHH QQYMANQGYIVVSIENRGANTPRGREWRKCIYGEVGTFASEDQSRGILDMTRQYPFIDAN HHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCC RIGITGWSGGGSQTLNCMFRYPKIFHTGIAIAFVADQRLYDTIYQERYMNTPQNNPEGYH CEEEEEECCCCCCEEEEEEECCHHHHCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCC KGSPITYAEGLEGNLLLIHGTGDDNVHYQNCEMLVNKLIKNGKMFTQISYPMRSHSINER CCCCEEEECCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCC EGTTLHLRKTMAKYWLEHLPAGGK CCCEEEHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA