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The map label for this gene is epsA [H]

Identifier: 150008834

GI number: 150008834

Start: 2614465

End: 2615256

Strand: Reverse

Name: epsA [H]

Synonym: BDI_2224

Alternate gene names: 150008834

Gene position: 2615256-2614465 (Counterclockwise)

Preceding gene: 150008835

Following gene: 150008833

Centisome position: 54.36

GC content: 48.86

Gene sequence:

>792_bases
ATGAAAATCAGATACATTTTATTCTTATTGACCGTGGCTTTCCTGCTGGGATCATGTGCCACACCGGAAGTCGCTTATTT
CACGGACCTGAAACCGGGTACCGCAGAGCAAGTCTTGAACCCGCTGGAAATCCGGGTGCGTCCCGAAGACAAGATCTCAA
TACTGGTCAACAGCAAGGACCCCTTGTTGATGAACCTTTTCAATCTTCCGATCATATCCAGGCAGATCGGTACGGCATCG
GGAACATCCAATAGCCAGGGGATATCAGGATATACGATCAACAAGGATGGAGATATCGATTTTCCAGTGTTGGGGCATAT
CCATGTGGCGGGAATGACACGCGAGGAAATCGCCTCGTATATAAAAGAGGAACTGGTTTCGAAGAATCTCGTGAAAGACC
CCGTTGTTACAGTTGAGTTCATGAACCTGACCGTTTCCGTGTTGGGTGAGGTTGCCAACCCCGGACGTTTCAATATCGAC
AAGGACAAGCTGACGCTTTTGGACGCTTTAAGCATGGCCGGAGACCTTACCGTCTACGGGAAACGGGAGAATGTCTTGGT
ACAACGGGAGGAAAACGGCAAACAGACCTTGTATCAGGTCAACCTGAATTCGGGATATGACCTTTATGCCTCTCCCGTGT
ATTATCTGCAGCAGAACGATATCGTTTATGTGGAACCCAACTCGATGAAAGCACGGCAGGCGACTGTCAACGGCAATAAC
GTCCGTTCTGCCTCCTTCTGGATGTCGTTGGCCTCATTGCTGACCACCATTACCGTGTTGATCGTAAAATAA

Upstream 100 bases:

>100_bases
GGCGATATCCTGATATGGACTCTTGCCAACATCAGGCTGACGAAATCTATCGGACAACTTCAATCGGAACAGAAAACCAA
CAAATAAAAATCAATAAAAT

Downstream 100 bases:

>100_bases
CATAGAATCAGATATGATGACTATAAACCCAAAAAATACAAAACCGGGACAGCAAGATGATTTCCTGCGGATACAGGATC
TGTTGTTCCTGTGCCTTGCG

Product: BexD/CtrA/VexA family polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKIRYILFLLTVAFLLGSCATPEVAYFTDLKPGTAEQVLNPLEIRVRPEDKISILVNSKDPLLMNLFNLPIISRQIGTAS
GTSNSQGISGYTINKDGDIDFPVLGHIHVAGMTREEIASYIKEELVSKNLVKDPVVTVEFMNLTVSVLGEVANPGRFNID
KDKLTLLDALSMAGDLTVYGKRENVLVQREENGKQTLYQVNLNSGYDLYASPVYYLQQNDIVYVEPNSMKARQATVNGNN
VRSASFWMSLASLLTTITVLIVK

Sequences:

>Translated_263_residues
MKIRYILFLLTVAFLLGSCATPEVAYFTDLKPGTAEQVLNPLEIRVRPEDKISILVNSKDPLLMNLFNLPIISRQIGTAS
GTSNSQGISGYTINKDGDIDFPVLGHIHVAGMTREEIASYIKEELVSKNLVKDPVVTVEFMNLTVSVLGEVANPGRFNID
KDKLTLLDALSMAGDLTVYGKRENVLVQREENGKQTLYQVNLNSGYDLYASPVYYLQQNDIVYVEPNSMKARQATVNGNN
VRSASFWMSLASLLTTITVLIVK
>Mature_263_residues
MKIRYILFLLTVAFLLGSCATPEVAYFTDLKPGTAEQVLNPLEIRVRPEDKISILVNSKDPLLMNLFNLPIISRQIGTAS
GTSNSQGISGYTINKDGDIDFPVLGHIHVAGMTREEIASYIKEELVSKNLVKDPVVTVEFMNLTVSVLGEVANPGRFNID
KDKLTLLDALSMAGDLTVYGKRENVLVQREENGKQTLYQVNLNSGYDLYASPVYYLQQNDIVYVEPNSMKARQATVNGNN
VRSASFWMSLASLLTTITVLIVK

Specific function: Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 29110; Mature: 29110

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRYILFLLTVAFLLGSCATPEVAYFTDLKPGTAEQVLNPLEIRVRPEDKISILVNSKD
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCEEEEECCCCEEEEEEECCC
PLLMNLFNLPIISRQIGTASGTSNSQGISGYTINKDGDIDFPVLGHIHVAGMTREEIASY
CEEEHHHCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCHHHHHHH
IKEELVSKNLVKDPVVTVEFMNLTVSVLGEVANPGRFNIDKDKLTLLDALSMAGDLTVYG
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
KRENVLVQREENGKQTLYQVNLNSGYDLYASPVYYLQQNDIVYVEPNSMKARQATVNGNN
CCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEECCCEEEECCCCCCEEEEECCCCC
VRSASFWMSLASLLTTITVLIVK
CCHHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MKIRYILFLLTVAFLLGSCATPEVAYFTDLKPGTAEQVLNPLEIRVRPEDKISILVNSKD
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCEEEEECCCCEEEEEEECCC
PLLMNLFNLPIISRQIGTASGTSNSQGISGYTINKDGDIDFPVLGHIHVAGMTREEIASY
CEEEHHHCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCHHHHHHH
IKEELVSKNLVKDPVVTVEFMNLTVSVLGEVANPGRFNIDKDKLTLLDALSMAGDLTVYG
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
KRENVLVQREENGKQTLYQVNLNSGYDLYASPVYYLQQNDIVYVEPNSMKARQATVNGNN
CCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEECCCEEEECCCCCCEEEEECCCCC
VRSASFWMSLASLLTTITVLIVK
CCHHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]