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The map label for this gene is yibD [C]

Identifier: 150008823

GI number: 150008823

Start: 2601672

End: 2602628

Strand: Reverse

Name: yibD [C]

Synonym: BDI_2213

Alternate gene names: 150008823

Gene position: 2602628-2601672 (Counterclockwise)

Preceding gene: 150008824

Following gene: 150008822

Centisome position: 54.09

GC content: 33.23

Gene sequence:

>957_bases
ATGAAATCCCCATTAGTTTCAATACTTATTCCACTATATAATGCCGAAGATTTTATCATCGAGACCCTCGAATGTTGTGT
TAATCAAACATACAAAAACATTGAGGTTATTGTAGTTGATGATGAAAGTAAAGATAATTCCTATGCAATAGCAATGGAGT
ATAGCAAAAGCCATCCTCAGGTTAAAATATATAAGCAAGTTAATTCAGGAGCTTGTCGTGCAAGAAATTTTGCTTTTGAG
AAAAGTGTGGGTGATTATGTTATTTATTTAGATGCAGATGACCTCATCAGTACGCAATTCGTTGAGCAACATATTTCTGT
TTTAAGAAAAACCGACGGTAATTGCATGAGTTTTTGTTCATGGGGAAAATTCGCTAATAGTACGGATAAATGTAACTTTT
TTGACATAGGAATATACAGAGATTATCCTCATGGCTTTGACTTGCTACTTGATATGTGGGATAGAGGTGTAATGCTTCAA
ACCTCATGTTACATGACTCCTCGTAAGTTGGTAATACAATCAGGTGGCTGGGACGAATCTGTAATCAAAAATCAAGATGG
TGATTTTTTTTCTCGTGTTTTAGTTTTATCAAAAGATGTTAAATATGTACCAGACGTTAAAGTATATTACCGTACTGGGA
ATTATGCGAGTGTGAGCAGAAATATGAGTGAAGCAGCTGCATCTTCTATACTTTATACATTATGCAGCTATCGAAATACT
ATCTTCACGTATGAAAACAGTAAAAGAACTCGCTCTATACTCAGCATGAAATATACAAATTTCATTTATATTTATGGAAA
CTTATATCCCCATCTTTATAATTTAGCAAAACAAGAAATCAAGTCTTTAAATACGGGATATGTTCTTAAACACGTGCCAC
ATCGAGTGAAACAAATATCTCAAATAATAGGTTTTGACAACTTCATGACTTTACGCAAATTGCTATTCAAAAAGTAA

Upstream 100 bases:

>100_bases
AATTGTTTATTTGGCATATATGCTATACAATAAATTGAAATAATATACGAAAATTACTATAATCTAGCAATATAGATAAA
CAATTGCATTAAAAAAGCAT

Downstream 100 bases:

>100_bases
ATAATAACACTATTTTACATGAAACGTATATTATACATAGGAATCTATAACGACGGCTCTACATCTAAGATGAGGGCAGA
CATAATCAATGAAATACTAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKSPLVSILIPLYNAEDFIIETLECCVNQTYKNIEVIVVDDESKDNSYAIAMEYSKSHPQVKIYKQVNSGACRARNFAFE
KSVGDYVIYLDADDLISTQFVEQHISVLRKTDGNCMSFCSWGKFANSTDKCNFFDIGIYRDYPHGFDLLLDMWDRGVMLQ
TSCYMTPRKLVIQSGGWDESVIKNQDGDFFSRVLVLSKDVKYVPDVKVYYRTGNYASVSRNMSEAAASSILYTLCSYRNT
IFTYENSKRTRSILSMKYTNFIYIYGNLYPHLYNLAKQEIKSLNTGYVLKHVPHRVKQISQIIGFDNFMTLRKLLFKK

Sequences:

>Translated_318_residues
MKSPLVSILIPLYNAEDFIIETLECCVNQTYKNIEVIVVDDESKDNSYAIAMEYSKSHPQVKIYKQVNSGACRARNFAFE
KSVGDYVIYLDADDLISTQFVEQHISVLRKTDGNCMSFCSWGKFANSTDKCNFFDIGIYRDYPHGFDLLLDMWDRGVMLQ
TSCYMTPRKLVIQSGGWDESVIKNQDGDFFSRVLVLSKDVKYVPDVKVYYRTGNYASVSRNMSEAAASSILYTLCSYRNT
IFTYENSKRTRSILSMKYTNFIYIYGNLYPHLYNLAKQEIKSLNTGYVLKHVPHRVKQISQIIGFDNFMTLRKLLFKK
>Mature_318_residues
MKSPLVSILIPLYNAEDFIIETLECCVNQTYKNIEVIVVDDESKDNSYAIAMEYSKSHPQVKIYKQVNSGACRARNFAFE
KSVGDYVIYLDADDLISTQFVEQHISVLRKTDGNCMSFCSWGKFANSTDKCNFFDIGIYRDYPHGFDLLLDMWDRGVMLQ
TSCYMTPRKLVIQSGGWDESVIKNQDGDFFSRVLVLSKDVKYVPDVKVYYRTGNYASVSRNMSEAAASSILYTLCSYRNT
IFTYENSKRTRSILSMKYTNFIYIYGNLYPHLYNLAKQEIKSLNTGYVLKHVPHRVKQISQIIGFDNFMTLRKLLFKK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=89, Percent_Identity=42.6966292134831, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36786; Mature: 36786

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPLVSILIPLYNAEDFIIETLECCVNQTYKNIEVIVVDDESKDNSYAIAMEYSKSHPQ
CCCCCEEHEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC
VKIYKQVNSGACRARNFAFEKSVGDYVIYLDADDLISTQFVEQHISVLRKTDGNCMSFCS
EEEEEECCCCCCHHHCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
WGKFANSTDKCNFFDIGIYRDYPHGFDLLLDMWDRGVMLQTSCYMTPRKLVIQSGGWDES
CCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCHH
VIKNQDGDFFSRVLVLSKDVKYVPDVKVYYRTGNYASVSRNMSEAAASSILYTLCSYRNT
HHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCE
IFTYENSKRTRSILSMKYTNFIYIYGNLYPHLYNLAKQEIKSLNTGYVLKHVPHRVKQIS
EEEECCCHHHHHHHHEEECCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QIIGFDNFMTLRKLLFKK
HHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKSPLVSILIPLYNAEDFIIETLECCVNQTYKNIEVIVVDDESKDNSYAIAMEYSKSHPQ
CCCCCEEHEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC
VKIYKQVNSGACRARNFAFEKSVGDYVIYLDADDLISTQFVEQHISVLRKTDGNCMSFCS
EEEEEECCCCCCHHHCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
WGKFANSTDKCNFFDIGIYRDYPHGFDLLLDMWDRGVMLQTSCYMTPRKLVIQSGGWDES
CCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCHH
VIKNQDGDFFSRVLVLSKDVKYVPDVKVYYRTGNYASVSRNMSEAAASSILYTLCSYRNT
HHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCE
IFTYENSKRTRSILSMKYTNFIYIYGNLYPHLYNLAKQEIKSLNTGYVLKHVPHRVKQIS
EEEECCCHHHHHHHHEEECCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QIIGFDNFMTLRKLLFKK
HHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]