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The map label for this gene is rsmI [H]

Identifier: 150008795

GI number: 150008795

Start: 2571496

End: 2572200

Strand: Reverse

Name: rsmI [H]

Synonym: BDI_2185

Alternate gene names: 150008795

Gene position: 2572200-2571496 (Counterclockwise)

Preceding gene: 150008797

Following gene: 150008794

Centisome position: 53.46

GC content: 49.93

Gene sequence:

>705_bases
ATGCGAGCATCTCTTTTCCTTATACCAGTTACCTTGGGCGATACGGAACATCGCCGTGTTTTACCAGAGTACAACCGTGA
CGTGATCTTATCCATCCGGCATTTTATCGTGGAAAACGTGCGTACGGCACGCCGTTTCTTGAAAAAGGTGGAGCCGGGGA
TCGTGATCGATGACTTGACATTTTATGAGCTGAATAAACATACCTCCCCGGAACAAGTAGCTGGTTATCTGGCTCCTTTG
GCGAAAGGCGAGAGCGTAGGCGTGATCTCGGAGGCGGGTTGTCCGGCGATCGCTGATCCGGGTGCTGACGTAGTAGCTAT
CGCCCAACGGAAGGATTATCCGGTGGTACCGTTGGTGGGGCCTTCGTCTATCTTGATGTCGGTGATGGGATCGGGCTTTA
ACGGACAGAGTTTCGCTTTTCACGGTTATCTGCCGATTGATGCTTCCGAGCGAACGAACACGATCAAGAAATTGGAGGGA
AGGATCTATTCCGAGCATCAGACGCAATTGTTTATCGAGACTCCTTACCGGAATAATAAACTGGCCGAGGAGTTGATCCG
TACGTGCCGTCCGTCTACGAAACTGTGTATCGCCTCGAATATAACCTGTGAGGATGAGTATATCCATACTCGCCCGGTCA
AGGAATGGGCGGGTAAAGTTCCCGATCTGAGCAAGAAGCCTACTATTTTCCTAATCTATAAATAA

Upstream 100 bases:

>100_bases
CCAAGTAAAGCCCGTGTACGGGTAATAAAATCAATAGGAAGTGCCATGATTATTCTGTTAGTTTGCGGCAAAAATACTAC
TTTCGCGGAAAACAAACAGT

Downstream 100 bases:

>100_bases
GAGGATTGATATGAGTTATCAAGCGCACGAGACAGCGGTAATCGATGCCGGTTGTGAGATCGGGGAAGGAACCCATATCT
GGCATTTTTCCCATATCATG

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRASLFLIPVTLGDTEHRRVLPEYNRDVILSIRHFIVENVRTARRFLKKVEPGIVIDDLTFYELNKHTSPEQVAGYLAPL
AKGESVGVISEAGCPAIADPGADVVAIAQRKDYPVVPLVGPSSILMSVMGSGFNGQSFAFHGYLPIDASERTNTIKKLEG
RIYSEHQTQLFIETPYRNNKLAEELIRTCRPSTKLCIASNITCEDEYIHTRPVKEWAGKVPDLSKKPTIFLIYK

Sequences:

>Translated_234_residues
MRASLFLIPVTLGDTEHRRVLPEYNRDVILSIRHFIVENVRTARRFLKKVEPGIVIDDLTFYELNKHTSPEQVAGYLAPL
AKGESVGVISEAGCPAIADPGADVVAIAQRKDYPVVPLVGPSSILMSVMGSGFNGQSFAFHGYLPIDASERTNTIKKLEG
RIYSEHQTQLFIETPYRNNKLAEELIRTCRPSTKLCIASNITCEDEYIHTRPVKEWAGKVPDLSKKPTIFLIYK
>Mature_234_residues
MRASLFLIPVTLGDTEHRRVLPEYNRDVILSIRHFIVENVRTARRFLKKVEPGIVIDDLTFYELNKHTSPEQVAGYLAPL
AKGESVGVISEAGCPAIADPGADVVAIAQRKDYPVVPLVGPSSILMSVMGSGFNGQSFAFHGYLPIDASERTNTIKKLEG
RIYSEHQTQLFIETPYRNNKLAEELIRTCRPSTKLCIASNITCEDEYIHTRPVKEWAGKVPDLSKKPTIFLIYK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=234, Percent_Identity=23.5042735042735, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 26186; Mature: 26186

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASLFLIPVTLGDTEHRRVLPEYNRDVILSIRHFIVENVRTARRFLKKVEPGIVIDDLT
CCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCE
FYELNKHTSPEQVAGYLAPLAKGESVGVISEAGCPAIADPGADVVAIAQRKDYPVVPLVG
EEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEC
PSSILMSVMGSGFNGQSFAFHGYLPIDASERTNTIKKLEGRIYSEHQTQLFIETPYRNNK
HHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCEECCCCEEEEEECCCCCCH
LAEELIRTCRPSTKLCIASNITCEDEYIHTRPVKEWAGKVPDLSKKPTIFLIYK
HHHHHHHHCCCCCCEEEECCCCCCCCCEECCCHHHHCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MRASLFLIPVTLGDTEHRRVLPEYNRDVILSIRHFIVENVRTARRFLKKVEPGIVIDDLT
CCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCE
FYELNKHTSPEQVAGYLAPLAKGESVGVISEAGCPAIADPGADVVAIAQRKDYPVVPLVG
EEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEC
PSSILMSVMGSGFNGQSFAFHGYLPIDASERTNTIKKLEGRIYSEHQTQLFIETPYRNNK
HHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCEECCCCEEEEEECCCCCCH
LAEELIRTCRPSTKLCIASNITCEDEYIHTRPVKEWAGKVPDLSKKPTIFLIYK
HHHHHHHHCCCCCCEEEECCCCCCCCCEECCCHHHHCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]