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The map label for this gene is ypnP [H]

Identifier: 150008792

GI number: 150008792

Start: 2566948

End: 2568321

Strand: Reverse

Name: ypnP [H]

Synonym: BDI_2182

Alternate gene names: 150008792

Gene position: 2568321-2566948 (Counterclockwise)

Preceding gene: 150008793

Following gene: 150008791

Centisome position: 53.38

GC content: 49.34

Gene sequence:

>1374_bases
ATGGCAAACTCAAAAGAGATGACGGGGGGAGCTGTATTCCCTCTTCTATTCAGTTTCACGATGCCGTTATTGCTAGGGAA
CTTACTTCAGCAGACTTATTCTCTGATCGATGCCGCTATCGTTGGTAAATTTCTAGGTATTAATTCGCTGGCTGCCGTAG
GAGCCAGTACCTCGGTGATTTTCTTGATTCTGGGATTCTGTAACGGATGTTGCGCCGGTTTTGGCATCCCGGTAGCTCAG
AAGTTCGGGGCGAGGGATTATGCGACGATGCGCCGTTACGTGGCGGTGGGGTTGCAATTGGCTACGGTGATGTCCGTGGT
GATCGCCGCTGTCTCCGGTTTCTATTGCCGGGATATCTTGCGGGGGATGCAGACACCCGGGAATATCTTCGATGGGGCCT
ATGATTATTTGTTTGTTACTTTTATCGGTATTCCTTGTACATTCTTCTATAATTTGTTGGCAAGTATCATGCGGGCTTTG
GGAGATAGCAAGACTCCGTTCTGGTTCTTGCTGTTCTCTACGGTCTTGAATGTTTTCTTGGATTTATTCTGCATCTTGGG
GTTAGGATGGGGCGTGATGGGAGCGGCTATCGCTACGGTTTTCTCGCAAGGGCTTTCCGCCATTCTATGTTATTTATATA
TGCTTCGGAAATTCCCGATCTTACGGGCTACTTCCTCTGAGGACCGAAGGTTCCATGCCGGGCTGGCCCGTACCTTGTTG
GCGATGGGGGTTCCGATGGGATTGCAATTCTCTATTACCGCCATTGGCAGTATCATGTTGCAGAGCGCCAATAACGCCTT
GGGCACGGCCTGTGTCGCTGCCTTTACTTCCGCCGCCCGTATCAAGATGTTCTTCATTTGCGCTTTTGAGAGTTTGGGTA
TCGCCATGGCTACGTATTGCGGACAGAATTATGGGGCGGGAAAGCCAGAGCGTATTTTGCAGGGAATTAAGGTAAGTGCG
TTGATGATGCTTACGTATGCCGCCGCTACATGGATGATCTTGATGCTGGGGTCTCGTTGGCTGGCCTTGTTGTTTGTGGC
TCCATCTGAGGTCGAGATACTGGACTATACGGAGCAGTTTTTGCATATTTCTTGCTGGTTCTTCCCGGCTGTCGGGCTAC
TGTGTATCTTGCGTTATGCGATACAAGGGGTAGGTTTCAGCAACCTTGCGATGCTCTCGGGTGTTTCAGAGATGATCGCA
CGTATCTTGGTGAGCTTGTATGCGGTTCCCGCTTTTGGGTTCTTAGGCGTTTGCTTCGGTGATCCGTTGGCTTGGGTCGC
CGCTGACTTATTCTTGATACCTGCGTTTTTGTATGTTTATAAAAAGATAAAGAAAAGATTAGATGATGAGAAAGTATCGG
TGTCCGCAGTGTGA

Upstream 100 bases:

>100_bases
CGCTTAAAATAATAGCGGGCGGGAATTGTTTTTTATTAGTGATTGATTACCTTTGTAGCGACTTATCCGTCTTTCTTAAA
TCCTTTTATTTGTTAGATGT

Downstream 100 bases:

>100_bases
TATCCCTTCTATGTATGTAAAGAATGCAGACGGGGAACGTCTTTTAGTGTATGTTTACGAGAATGGGGAGGTCGTTCCCA
AAGATCCTGCCGCAGATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MANSKEMTGGAVFPLLFSFTMPLLLGNLLQQTYSLIDAAIVGKFLGINSLAAVGASTSVIFLILGFCNGCCAGFGIPVAQ
KFGARDYATMRRYVAVGLQLATVMSVVIAAVSGFYCRDILRGMQTPGNIFDGAYDYLFVTFIGIPCTFFYNLLASIMRAL
GDSKTPFWFLLFSTVLNVFLDLFCILGLGWGVMGAAIATVFSQGLSAILCYLYMLRKFPILRATSSEDRRFHAGLARTLL
AMGVPMGLQFSITAIGSIMLQSANNALGTACVAAFTSAARIKMFFICAFESLGIAMATYCGQNYGAGKPERILQGIKVSA
LMMLTYAAATWMILMLGSRWLALLFVAPSEVEILDYTEQFLHISCWFFPAVGLLCILRYAIQGVGFSNLAMLSGVSEMIA
RILVSLYAVPAFGFLGVCFGDPLAWVAADLFLIPAFLYVYKKIKKRLDDEKVSVSAV

Sequences:

>Translated_457_residues
MANSKEMTGGAVFPLLFSFTMPLLLGNLLQQTYSLIDAAIVGKFLGINSLAAVGASTSVIFLILGFCNGCCAGFGIPVAQ
KFGARDYATMRRYVAVGLQLATVMSVVIAAVSGFYCRDILRGMQTPGNIFDGAYDYLFVTFIGIPCTFFYNLLASIMRAL
GDSKTPFWFLLFSTVLNVFLDLFCILGLGWGVMGAAIATVFSQGLSAILCYLYMLRKFPILRATSSEDRRFHAGLARTLL
AMGVPMGLQFSITAIGSIMLQSANNALGTACVAAFTSAARIKMFFICAFESLGIAMATYCGQNYGAGKPERILQGIKVSA
LMMLTYAAATWMILMLGSRWLALLFVAPSEVEILDYTEQFLHISCWFFPAVGLLCILRYAIQGVGFSNLAMLSGVSEMIA
RILVSLYAVPAFGFLGVCFGDPLAWVAADLFLIPAFLYVYKKIKKRLDDEKVSVSAV
>Mature_456_residues
ANSKEMTGGAVFPLLFSFTMPLLLGNLLQQTYSLIDAAIVGKFLGINSLAAVGASTSVIFLILGFCNGCCAGFGIPVAQK
FGARDYATMRRYVAVGLQLATVMSVVIAAVSGFYCRDILRGMQTPGNIFDGAYDYLFVTFIGIPCTFFYNLLASIMRALG
DSKTPFWFLLFSTVLNVFLDLFCILGLGWGVMGAAIATVFSQGLSAILCYLYMLRKFPILRATSSEDRRFHAGLARTLLA
MGVPMGLQFSITAIGSIMLQSANNALGTACVAAFTSAARIKMFFICAFESLGIAMATYCGQNYGAGKPERILQGIKVSAL
MMLTYAAATWMILMLGSRWLALLFVAPSEVEILDYTEQFLHISCWFFPAVGLLCILRYAIQGVGFSNLAMLSGVSEMIAR
ILVSLYAVPAFGFLGVCFGDPLAWVAADLFLIPAFLYVYKKIKKRLDDEKVSVSAV

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 49520; Mature: 49388

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure 
ANSKEMTGGAVFPLLFSFTMPLLLGNLLQQTYSLIDAAIVGKFLGINSLAAVGASTSVI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH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CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]