| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is flr [H]
Identifier: 150008782
GI number: 150008782
Start: 2558620
End: 2559180
Strand: Direct
Name: flr [H]
Synonym: BDI_2172
Alternate gene names: 150008782
Gene position: 2558620-2559180 (Clockwise)
Preceding gene: 150008781
Following gene: 150008784
Centisome position: 53.18
GC content: 45.99
Gene sequence:
>561_bases ATGAGAAAGAATTTTGGTGCGAAGCCTTTGAGCTATCCGCAACCCGTATTTATTATCGCCACGTATGGAGAAGATGGAAC TCCCGATGCGATGAACGCCGCTTGGGGCGGTATCAGTGAGATGAATGAGATCAGCATGTGTCTTAGCGCCGGTCACAAGA CAGTTAAGAATATCCTGAAGCGTAGAGCTTTCACGGTAAGCATGGCAGATGCCGATCATGTCGTGGCTTGTGATTATGTA GGCATCGTGTCGGGCAATAAAGTTACCGACAAGTTTGCCAAAGCAGGATTTCACGCTACAAAATCAGACTTCGTAGATGC TCCGTTGATCGACGAATTGGCCGTGGCTATCGAATGTAAATTGAAAGATTACGATCCGGATACTTGCATACTCCGTGGCG AGATCGTAAATGTCAGTGTTGACGAGCGTGTACTTGATGAGAACGGCAAGGTGAATGTAGCTAAAGCCGCTCCCATCATC TTTGATCCATTCAACAACGACTATTTGAGAGTGGGCGAAAAGGTAGGAAATGCCTTTTCCGATGGAAAACAATTGAAATA A
Upstream 100 bases:
>100_bases ATTGCGGAAAGCCTATCCGGATGTGAACTGGCAAAAAGGGAAGTTGATGAACGGAGCGACAGAAGAAGATATCAAGAATT GGACTAAAAAATAAATGATT
Downstream 100 bases:
>100_bases ATGACAGGGTAATAGCAATTAGTATTGATAGTAGCCTAGATTACTATCAATACTAATTTTGGAAACTATGTAATCAAATT CTGTTATAAACCAATTTAGA
Product: putative flavoredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MRKNFGAKPLSYPQPVFIIATYGEDGTPDAMNAAWGGISEMNEISMCLSAGHKTVKNILKRRAFTVSMADADHVVACDYV GIVSGNKVTDKFAKAGFHATKSDFVDAPLIDELAVAIECKLKDYDPDTCILRGEIVNVSVDERVLDENGKVNVAKAAPII FDPFNNDYLRVGEKVGNAFSDGKQLK
Sequences:
>Translated_186_residues MRKNFGAKPLSYPQPVFIIATYGEDGTPDAMNAAWGGISEMNEISMCLSAGHKTVKNILKRRAFTVSMADADHVVACDYV GIVSGNKVTDKFAKAGFHATKSDFVDAPLIDELAVAIECKLKDYDPDTCILRGEIVNVSVDERVLDENGKVNVAKAAPII FDPFNNDYLRVGEKVGNAFSDGKQLK >Mature_186_residues MRKNFGAKPLSYPQPVFIIATYGEDGTPDAMNAAWGGISEMNEISMCLSAGHKTVKNILKRRAFTVSMADADHVVACDYV GIVSGNKVTDKFAKAGFHATKSDFVDAPLIDELAVAIECKLKDYDPDTCILRGEIVNVSVDERVLDENGKVNVAKAAPII FDPFNNDYLRVGEKVGNAFSDGKQLK
Specific function: Participates in the reduction of bisulfite from hydrogen [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 20205; Mature: 20205
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKNFGAKPLSYPQPVFIIATYGEDGTPDAMNAAWGGISEMNEISMCLSAGHKTVKNILK CCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH RRAFTVSMADADHVVACDYVGIVSGNKVTDKFAKAGFHATKSDFVDAPLIDELAVAIECK HHEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHCCCCCCHHHEEEEEEEE LKDYDPDTCILRGEIVNVSVDERVLDENGKVNVAKAAPIIFDPFNNDYLRVGEKVGNAFS ECCCCCCEEEEEEEEEEEEHHHHHHCCCCCEEEEECCCEEECCCCCCHHHHHHHHCCHHC DGKQLK CCCCCC >Mature Secondary Structure MRKNFGAKPLSYPQPVFIIATYGEDGTPDAMNAAWGGISEMNEISMCLSAGHKTVKNILK CCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH RRAFTVSMADADHVVACDYVGIVSGNKVTDKFAKAGFHATKSDFVDAPLIDELAVAIECK HHEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHCCCCCCHHHEEEEEEEE LKDYDPDTCILRGEIVNVSVDERVLDENGKVNVAKAAPIIFDPFNNDYLRVGEKVGNAFS ECCCCCCEEEEEEEEEEEEHHHHHHCCCCCEEEEECCCEEECCCCCCHHHHHHHHCCHHC DGKQLK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10860809; 8387752 [H]