| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008751
Identifier: 150008751
GI number: 150008751
Start: 2525401
End: 2526372
Strand: Direct
Name: 150008751
Synonym: BDI_2141
Alternate gene names: NA
Gene position: 2525401-2526372 (Clockwise)
Preceding gene: 150008750
Following gene: 150008752
Centisome position: 52.49
GC content: 48.25
Gene sequence:
>972_bases ATGACAATCCAAGATGTAAAGCAAATCAAACTGGCAGACTATCTGCAAAGTCTGGGCTATACGCCTGTAAAGCAACAAGG CAAGAACCTGTGGTATAAATCACCGCTACGGGAAGAAACGGACGCATCGTTCAAGGTAAACACTGAGCTTGAAAAATGGT ATGACTTCGGCATCGGCAAAGGCGGAAACATCCTCGCATTGGCAGCGGAACTTTACTATTCGGAAGATGTAGCCTATCTG CTGAAACGCATAGAGGAGCGGACAGCATACATCCGCCCTGCATCGTTCTCTTTTGGCAGACAGCATTCCGACAATCAGCC TTATCAGGGATTAAGGGTTGGTGAGTTGTCCTCTCCTGCTCTTATAGCCTATCTGCAAGAAAGGGGAATAAACATCGGAC TTGCCAAAAGAGAATGCAGGGAGCTTCGGTTTATGAATGCCGACAAACCCTATTTTGCCATCGGCTTTCCGAACATGGCA GGAGGATATGAAGTGCGCAACAGATACTTCAAGGGATGTGTCGCCCCGAAAGACATCACCCATATCCGACAGCAGGACGG ACAACGATGTATGTGTTACCTGTTCGAGGGGTTCATGGATTACCTCTCATTCCTTACCATCCGAGTAAGAAACAATCCGC AACACCCGCGATTGGACACACAGGACTATGTCATACTGAACTCCGTTTCCAATCTTGCGAAAGCGGAAAGCTTATTGGAA ACCTACACCCAAGTCGGCTGTTTCCTTGACAACGACACGGCAGGACGGAACACCTGCAAGAAGCTGAAAGAGAAGTTTGG GGAACGGCTGCTTGACAAGTCAATGTACTATCGTGATTATAAGGACTTGAACGACTACCTGTGCGGTAAGCCCTTGTCCC AATCGGCAGAGCCGATAAAGGAGAAGAAGCAAGTCCAATCCGCAAGGCGGATGATGCAGCCACCGAAAAAGAAAGGGGGA TTTCATCTGTAA
Upstream 100 bases:
>100_bases TTGAGAAGATGTTGAAAGTTTACAGGTCTGTATATAAACATATTACATCAACAGTTCATCAAATCAACAAATTTTCATCA ACTTCAAAACCGTATGTAAT
Downstream 100 bases:
>100_bases TATGCACGTCCGCTCTCCCAAGGTATTTAGACAGAAATACCATAGCTCAATAGGGCGTTTTCTTCACGCATTACTCCGTA ACGCTAAAAACACCCTATCG
Product: DNA primase
Products: NA
Alternate protein names: Mobilizable Transposon Excision Protein; TraP Protein; Mobilizable Transposon Protein; TransposoN-Related/Mobilization Protein; Transposon-Related/Mobilisation Protein; Conjugal Transfer Protein TraP; Transposon-Related/Mobilization Protein; Mobilizable Transposon; Conserved Protein Found In Conjugate Transposon TraP; Mobilizable Transposon Protein Excision Protein
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTIQDVKQIKLADYLQSLGYTPVKQQGKNLWYKSPLREETDASFKVNTELEKWYDFGIGKGGNILALAAELYYSEDVAYL LKRIEERTAYIRPASFSFGRQHSDNQPYQGLRVGELSSPALIAYLQERGINIGLAKRECRELRFMNADKPYFAIGFPNMA GGYEVRNRYFKGCVAPKDITHIRQQDGQRCMCYLFEGFMDYLSFLTIRVRNNPQHPRLDTQDYVILNSVSNLAKAESLLE TYTQVGCFLDNDTAGRNTCKKLKEKFGERLLDKSMYYRDYKDLNDYLCGKPLSQSAEPIKEKKQVQSARRMMQPPKKKGG FHL
Sequences:
>Translated_323_residues MTIQDVKQIKLADYLQSLGYTPVKQQGKNLWYKSPLREETDASFKVNTELEKWYDFGIGKGGNILALAAELYYSEDVAYL LKRIEERTAYIRPASFSFGRQHSDNQPYQGLRVGELSSPALIAYLQERGINIGLAKRECRELRFMNADKPYFAIGFPNMA GGYEVRNRYFKGCVAPKDITHIRQQDGQRCMCYLFEGFMDYLSFLTIRVRNNPQHPRLDTQDYVILNSVSNLAKAESLLE TYTQVGCFLDNDTAGRNTCKKLKEKFGERLLDKSMYYRDYKDLNDYLCGKPLSQSAEPIKEKKQVQSARRMMQPPKKKGG FHL >Mature_322_residues TIQDVKQIKLADYLQSLGYTPVKQQGKNLWYKSPLREETDASFKVNTELEKWYDFGIGKGGNILALAAELYYSEDVAYLL KRIEERTAYIRPASFSFGRQHSDNQPYQGLRVGELSSPALIAYLQERGINIGLAKRECRELRFMNADKPYFAIGFPNMAG GYEVRNRYFKGCVAPKDITHIRQQDGQRCMCYLFEGFMDYLSFLTIRVRNNPQHPRLDTQDYVILNSVSNLAKAESLLET YTQVGCFLDNDTAGRNTCKKLKEKFGERLLDKSMYYRDYKDLNDYLCGKPLSQSAEPIKEKKQVQSARRMMQPPKKKGGF HL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37303; Mature: 37172
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQDVKQIKLADYLQSLGYTPVKQQGKNLWYKSPLREETDASFKVNTELEKWYDFGIGK CCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCC GGNILALAAELYYSEDVAYLLKRIEERTAYIRPASFSFGRQHSDNQPYQGLRVGELSSPA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH LIAYLQERGINIGLAKRECRELRFMNADKPYFAIGFPNMAGGYEVRNRYFKGCVAPKDIT HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHH HIRQQDGQRCMCYLFEGFMDYLSFLTIRVRNNPQHPRLDTQDYVILNSVSNLAKAESLLE HHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH TYTQVGCFLDNDTAGRNTCKKLKEKFGERLLDKSMYYRDYKDLNDYLCGKPLSQSAEPIK HHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH EKKQVQSARRMMQPPKKKGGFHL HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TIQDVKQIKLADYLQSLGYTPVKQQGKNLWYKSPLREETDASFKVNTELEKWYDFGIGK CHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCC GGNILALAAELYYSEDVAYLLKRIEERTAYIRPASFSFGRQHSDNQPYQGLRVGELSSPA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH LIAYLQERGINIGLAKRECRELRFMNADKPYFAIGFPNMAGGYEVRNRYFKGCVAPKDIT HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHH HIRQQDGQRCMCYLFEGFMDYLSFLTIRVRNNPQHPRLDTQDYVILNSVSNLAKAESLLE HHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH TYTQVGCFLDNDTAGRNTCKKLKEKFGERLLDKSMYYRDYKDLNDYLCGKPLSQSAEPIK HHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH EKKQVQSARRMMQPPKKKGGFHL HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA