| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is purM [H]
Identifier: 150008711
GI number: 150008711
Start: 2485014
End: 2486180
Strand: Direct
Name: purM [H]
Synonym: BDI_2101
Alternate gene names: 150008711
Gene position: 2485014-2486180 (Clockwise)
Preceding gene: 150008710
Following gene: 150008712
Centisome position: 51.65
GC content: 47.22
Gene sequence:
>1167_bases ATGAGTGATCAACGTTATAACCTGCGAGGCGTTTCCGCTTCAAAAGAAGATGTTCACAATGCGATAAAGAACATCGATAA GGGAATTTTTCCGAAAGCGTTCTGTAAGATCATCCCCGATATCTTAGGCGGTGATCCTGAATATTGTAATATTATGCACG CGGATGGCGCCGGTACCAAATCGTCCTTGGCGTATATGTACTGGAAAGAGACCGGAGATCTTTCGGTGTGGAAAGGTATC GCCCAAGACGCTCTTATCATGAATATCGACGACCTGCTCTGCGTAGGTGCCGTAGACAATATCTTGGTCTCTTCTACAAT TGGACGTAACAAGCTGTTGGTTCCGGGCGAGGTGATCTCGGCGATCATCAATGGAACAGATGAGTTGCTGGCAGAGTTAC GTGAGATGGGCGTTGGTTGCTACGCGACAGGTGGCGAGACCGCAGACGTTGGCGACTTAGTTCGTACCATCATCGTAGAT AGTACGGTCACTTGCCGCATGAAACGTTCGGACGTAATCGATAATAAGAATATCCAAGGAGGAGACGTGATCGTAGGTCT GGCATCTTCCGGACAAGCCACTTACGAGAAAGAATACAATGGAGGTATGGGTAGCAACGGCTTGACCTCTGCCCGCCATG ATGTTTTCTCTAAGTATTTAGCGAAAAAATATCCGGAAAGCTACGATGCCGCCGTTCCCAAAGAATTGGTTTACTCCGGA GGATTGAAACTTACGGATAAGATCGAGGAATTAGGGATCGATGCCGGAAAGATGGTGCTTTCGCCTACACGTACCTATGC GCCGGTAATTAAGGTATTGCTTGATAAACTACGCTCTCAAATCCATGGTATGGTACATTGTTCGGGAGGGGCCCAGACAA AAGTCATGCATTTCGTAGAGAACAAGCGTGTAACTAAGGACAATCTCTTCCCTATCCCACCGTTATTCCGCACGATTCAG GAGCAGAGCGGTACGGACTGGAGCGAGATGTACAAGGTATTCAATATGGGACACCGGATGGAGATATACATCGCTCCCGA GCATGCGGAAGAAGTAATCGGCATCTCAAAAAGCTTTGGTATTGATGCGCAAATCGTGGGCTTCGTAGAGGAAGCTGATA AAAATGAATTGATTATCGAAAGCGAGAAAGGTCGCTTCACCTATTAA
Upstream 100 bases:
>100_bases AAAAAAGACAAAGATTACATCCCGGAGGAAGGAGATGTCTTAAAACTTAGATAAGTAACATAAAAAAGTATTACCTTTGC GGTTCAAATAATATAGTACA
Downstream 100 bases:
>100_bases TAAAGATAAATGGCCGAAAATAGTTTACTTGGTAAATTAGACGGATTAGTGAGCCGTTTCGAGGAAGTCGGTACCCTTAT TACCGACCCGGCGGTGATCG
Product: putative phosphoribosylformylglycinamidine cyclo-ligase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSDQRYNLRGVSASKEDVHNAIKNIDKGIFPKAFCKIIPDILGGDPEYCNIMHADGAGTKSSLAYMYWKETGDLSVWKGI AQDALIMNIDDLLCVGAVDNILVSSTIGRNKLLVPGEVISAIINGTDELLAELREMGVGCYATGGETADVGDLVRTIIVD STVTCRMKRSDVIDNKNIQGGDVIVGLASSGQATYEKEYNGGMGSNGLTSARHDVFSKYLAKKYPESYDAAVPKELVYSG GLKLTDKIEELGIDAGKMVLSPTRTYAPVIKVLLDKLRSQIHGMVHCSGGAQTKVMHFVENKRVTKDNLFPIPPLFRTIQ EQSGTDWSEMYKVFNMGHRMEIYIAPEHAEEVIGISKSFGIDAQIVGFVEEADKNELIIESEKGRFTY
Sequences:
>Translated_388_residues MSDQRYNLRGVSASKEDVHNAIKNIDKGIFPKAFCKIIPDILGGDPEYCNIMHADGAGTKSSLAYMYWKETGDLSVWKGI AQDALIMNIDDLLCVGAVDNILVSSTIGRNKLLVPGEVISAIINGTDELLAELREMGVGCYATGGETADVGDLVRTIIVD STVTCRMKRSDVIDNKNIQGGDVIVGLASSGQATYEKEYNGGMGSNGLTSARHDVFSKYLAKKYPESYDAAVPKELVYSG GLKLTDKIEELGIDAGKMVLSPTRTYAPVIKVLLDKLRSQIHGMVHCSGGAQTKVMHFVENKRVTKDNLFPIPPLFRTIQ EQSGTDWSEMYKVFNMGHRMEIYIAPEHAEEVIGISKSFGIDAQIVGFVEEADKNELIIESEKGRFTY >Mature_387_residues SDQRYNLRGVSASKEDVHNAIKNIDKGIFPKAFCKIIPDILGGDPEYCNIMHADGAGTKSSLAYMYWKETGDLSVWKGIA QDALIMNIDDLLCVGAVDNILVSSTIGRNKLLVPGEVISAIINGTDELLAELREMGVGCYATGGETADVGDLVRTIIVDS TVTCRMKRSDVIDNKNIQGGDVIVGLASSGQATYEKEYNGGMGSNGLTSARHDVFSKYLAKKYPESYDAAVPKELVYSGG LKLTDKIEELGIDAGKMVLSPTRTYAPVIKVLLDKLRSQIHGMVHCSGGAQTKVMHFVENKRVTKDNLFPIPPLFRTIQE QSGTDWSEMYKVFNMGHRMEIYIAPEHAEEVIGISKSFGIDAQIVGFVEEADKNELIIESEKGRFTY
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 42493; Mature: 42362
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQRYNLRGVSASKEDVHNAIKNIDKGIFPKAFCKIIPDILGGDPEYCNIMHADGAGTK CCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC SSLAYMYWKETGDLSVWKGIAQDALIMNIDDLLCVGAVDNILVSSTIGRNKLLVPGEVIS CCEEEEEEECCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHH AIINGTDELLAELREMGVGCYATGGETADVGDLVRTIIVDSTVTCRMKRSDVIDNKNIQG HHHCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC GDVIVGLASSGQATYEKEYNGGMGSNGLTSARHDVFSKYLAKKYPESYDAAVPKELVYSG CCEEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC GLKLTDKIEELGIDAGKMVLSPTRTYAPVIKVLLDKLRSQIHGMVHCSGGAQTKVMHFVE CCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHH NKRVTKDNLFPIPPLFRTIQEQSGTDWSEMYKVFNMGHRMEIYIAPEHAEEVIGISKSFG CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCC IDAQIVGFVEEADKNELIIESEKGRFTY CCHHEEEHHHHCCCCCEEEECCCCCCCC >Mature Secondary Structure SDQRYNLRGVSASKEDVHNAIKNIDKGIFPKAFCKIIPDILGGDPEYCNIMHADGAGTK CCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC SSLAYMYWKETGDLSVWKGIAQDALIMNIDDLLCVGAVDNILVSSTIGRNKLLVPGEVIS CCEEEEEEECCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHH AIINGTDELLAELREMGVGCYATGGETADVGDLVRTIIVDSTVTCRMKRSDVIDNKNIQG HHHCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC GDVIVGLASSGQATYEKEYNGGMGSNGLTSARHDVFSKYLAKKYPESYDAAVPKELVYSG CCEEEEECCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC GLKLTDKIEELGIDAGKMVLSPTRTYAPVIKVLLDKLRSQIHGMVHCSGGAQTKVMHFVE CCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHH NKRVTKDNLFPIPPLFRTIQEQSGTDWSEMYKVFNMGHRMEIYIAPEHAEEVIGISKSFG CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCC IDAQIVGFVEEADKNELIIESEKGRFTY CCHHEEEHHHHCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA