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The map label for this gene is yrbE [H]

Identifier: 150008660

GI number: 150008660

Start: 2416152

End: 2417465

Strand: Direct

Name: yrbE [H]

Synonym: BDI_2050

Alternate gene names: 150008660

Gene position: 2416152-2417465 (Clockwise)

Preceding gene: 150008653

Following gene: 150008662

Centisome position: 50.22

GC content: 50.84

Gene sequence:

>1314_bases
ATGACAACTCGAAGAGATTTTCTCCGGCAGACCGCTTTGCTCGGTGCCGGACTTACCATCAGTCCTTTTTTCATTAAAGC
CGGGAGCGCTGGTGTGGGCGCAAACGATAAGATAGGCGTCGGGCTTATCGGATGTAACGGCATGGGATTCGAAGACCTGA
AAGCGTTCCTTCGTAATCCGGAAGTAGAGTGTATCGCCTTGTCGGATATTGACGAGAACGTATTGAATAATCGGGCGGCA
GAGACCGAGAAGATCACCGGGAAGAAAGTAAAGCATTTATATAAAGACTGGCGTAAATTGATAGACAATAAGGATATCGA
TCTCGTAATCGTAGGTACTCCCGATCATTGGCACTGCCTGCAAATGGTATCCGCTTGCCAAGCCGGGAAGGATGTGTATT
GTGAGAAACCGCTGGGAAATAGTATCGAGGAATGTAACATCATGGTACGGGCGGCGCAGAAATACAACCGGGTCGTGCAG
GTAGGCCAATGGCAACGTAGCGATCCGCATTGGCAGGACGCCATGCAATTCGTACATAGCGGACAGCTGGGTAAGATACG
CACCGTACGTGTATTCTCTTATCAAGGTTGGTGCCCCTCTATCCCCGTCAAGCCGGACGAGGCGGTGCCCGCCGGAGTGG
ACTATGATATGTGGCTGGGGCCGGCCCCGAAACGTCCGTTCAATCGGAACCGTTTTCATTTCACATTCCGTTGGTTCTGG
GATTATGCGGGAGGTTTGATGACGGACTGGGGCGTACATTTACTGGATTACGCATTGTATGGCATGAACGTCACCGCACC
GGAGTCTATCATGGCTTCCGGAGGTAAATTTGGTTATCCGGATGACGCTTGCGAGACCCCGGACTTATTGCAAACCATTT
ATACATTCAAGGACTTCACCGTTATGTGGGATCATGCGATCGGCATTGACGACGGGGCCTACGGACGGAATCATGGCCTA
GGATTCGTTGGCGAGAACGGTACCTTGGTGATCGATCGTGGCGGCTGGGAGGTTATTCCGGAAAAGGTAAACGGACAGGC
CCGCATGGAGGCTGTTCCCTTGAAGAAGTCATACGGAGAGGGTGGCTTGAATTTGCATGCGAAGAATCATTTGGAATGTA
TCAAGAGCCGGAACCGGAATTGCAATGCCAGCGTAGAGATCGGGGCGCATATCGCCAAGTTCTCCCAATTAGGGAATATA
GCCTATCGCACGGGTAAGAAATTATCGTGGGATGGAAAGAGTTTCCATGATACGGAGGCGGATAAACTATTGTGCAAGGA
ATACAGGGCACCGTGGGAATTACCGAAAATATAA

Upstream 100 bases:

>100_bases
ATACTTCATCGACTAAGTAAGTAGTTAAAAAGCTATTATCATTTGCGATTGTAAAGGATTTCGCTTAATATTGCAAATAC
TTTAAATCAATAGTAATACC

Downstream 100 bases:

>100_bases
GGATCTAGTTGTAGGGACGGGGCACGCCCCGTCTCTACAACTGGGTATTTATTGATGTTCGGGGCGTAACAGGTCGTTCA
CCGTCTTCACGGGGTTGAAT

Product: putative NADH-dependent dyhydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MTTRRDFLRQTALLGAGLTISPFFIKAGSAGVGANDKIGVGLIGCNGMGFEDLKAFLRNPEVECIALSDIDENVLNNRAA
ETEKITGKKVKHLYKDWRKLIDNKDIDLVIVGTPDHWHCLQMVSACQAGKDVYCEKPLGNSIEECNIMVRAAQKYNRVVQ
VGQWQRSDPHWQDAMQFVHSGQLGKIRTVRVFSYQGWCPSIPVKPDEAVPAGVDYDMWLGPAPKRPFNRNRFHFTFRWFW
DYAGGLMTDWGVHLLDYALYGMNVTAPESIMASGGKFGYPDDACETPDLLQTIYTFKDFTVMWDHAIGIDDGAYGRNHGL
GFVGENGTLVIDRGGWEVIPEKVNGQARMEAVPLKKSYGEGGLNLHAKNHLECIKSRNRNCNASVEIGAHIAKFSQLGNI
AYRTGKKLSWDGKSFHDTEADKLLCKEYRAPWELPKI

Sequences:

>Translated_437_residues
MTTRRDFLRQTALLGAGLTISPFFIKAGSAGVGANDKIGVGLIGCNGMGFEDLKAFLRNPEVECIALSDIDENVLNNRAA
ETEKITGKKVKHLYKDWRKLIDNKDIDLVIVGTPDHWHCLQMVSACQAGKDVYCEKPLGNSIEECNIMVRAAQKYNRVVQ
VGQWQRSDPHWQDAMQFVHSGQLGKIRTVRVFSYQGWCPSIPVKPDEAVPAGVDYDMWLGPAPKRPFNRNRFHFTFRWFW
DYAGGLMTDWGVHLLDYALYGMNVTAPESIMASGGKFGYPDDACETPDLLQTIYTFKDFTVMWDHAIGIDDGAYGRNHGL
GFVGENGTLVIDRGGWEVIPEKVNGQARMEAVPLKKSYGEGGLNLHAKNHLECIKSRNRNCNASVEIGAHIAKFSQLGNI
AYRTGKKLSWDGKSFHDTEADKLLCKEYRAPWELPKI
>Mature_436_residues
TTRRDFLRQTALLGAGLTISPFFIKAGSAGVGANDKIGVGLIGCNGMGFEDLKAFLRNPEVECIALSDIDENVLNNRAAE
TEKITGKKVKHLYKDWRKLIDNKDIDLVIVGTPDHWHCLQMVSACQAGKDVYCEKPLGNSIEECNIMVRAAQKYNRVVQV
GQWQRSDPHWQDAMQFVHSGQLGKIRTVRVFSYQGWCPSIPVKPDEAVPAGVDYDMWLGPAPKRPFNRNRFHFTFRWFWD
YAGGLMTDWGVHLLDYALYGMNVTAPESIMASGGKFGYPDDACETPDLLQTIYTFKDFTVMWDHAIGIDDGAYGRNHGLG
FVGENGTLVIDRGGWEVIPEKVNGQARMEAVPLKKSYGEGGLNLHAKNHLECIKSRNRNCNASVEIGAHIAKFSQLGNIA
YRTGKKLSWDGKSFHDTEADKLLCKEYRAPWELPKI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 48952; Mature: 48821

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRRDFLRQTALLGAGLTISPFFIKAGSAGVGANDKIGVGLIGCNGMGFEDLKAFLRNP
CCCHHHHHHHHHHHCCCCEECEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCC
EVECIALSDIDENVLNNRAAETEKITGKKVKHLYKDWRKLIDNKDIDLVIVGTPDHWHCL
CEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH
QMVSACQAGKDVYCEKPLGNSIEECNIMVRAAQKYNRVVQVGQWQRSDPHWQDAMQFVHS
HHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
GQLGKIRTVRVFSYQGWCPSIPVKPDEAVPAGVDYDMWLGPAPKRPFNRNRFHFTFRWFW
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
DYAGGLMTDWGVHLLDYALYGMNVTAPESIMASGGKFGYPDDACETPDLLQTIYTFKDFT
HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCEE
VMWDHAIGIDDGAYGRNHGLGFVGENGTLVIDRGGWEVIPEKVNGQARMEAVPLKKSYGE
EEEEEEECCCCCCCCCCCCCEEEECCCEEEEECCCCEECCHHCCCCEEEEEECCHHHCCC
GGLNLHAKNHLECIKSRNRNCNASVEIGAHIAKFSQLGNIAYRTGKKLSWDGKSFHDTEA
CCCEECHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCHHHHCCCEECCCCCCCCCCHH
DKLLCKEYRAPWELPKI
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TTRRDFLRQTALLGAGLTISPFFIKAGSAGVGANDKIGVGLIGCNGMGFEDLKAFLRNP
CCHHHHHHHHHHHCCCCEECEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCC
EVECIALSDIDENVLNNRAAETEKITGKKVKHLYKDWRKLIDNKDIDLVIVGTPDHWHCL
CEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH
QMVSACQAGKDVYCEKPLGNSIEECNIMVRAAQKYNRVVQVGQWQRSDPHWQDAMQFVHS
HHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
GQLGKIRTVRVFSYQGWCPSIPVKPDEAVPAGVDYDMWLGPAPKRPFNRNRFHFTFRWFW
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
DYAGGLMTDWGVHLLDYALYGMNVTAPESIMASGGKFGYPDDACETPDLLQTIYTFKDFT
HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCEE
VMWDHAIGIDDGAYGRNHGLGFVGENGTLVIDRGGWEVIPEKVNGQARMEAVPLKKSYGE
EEEEEEECCCCCCCCCCCCCEEEECCCEEEEECCCCEECCHHCCCCEEEEEECCHHHCCC
GGLNLHAKNHLECIKSRNRNCNASVEIGAHIAKFSQLGNIAYRTGKKLSWDGKSFHDTEA
CCCEECHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCHHHHCCCEECCCCCCCCCCHH
DKLLCKEYRAPWELPKI
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]