| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is ubiE [H]
Identifier: 150008602
GI number: 150008602
Start: 2352204
End: 2352947
Strand: Direct
Name: ubiE [H]
Synonym: BDI_1988
Alternate gene names: 150008602
Gene position: 2352204-2352947 (Clockwise)
Preceding gene: 150008601
Following gene: 150008603
Centisome position: 48.89
GC content: 47.18
Gene sequence:
>744_bases ATGACACAGTATGGTTCAGAGACAATACTTCCTTATAACAAAGAGGAACAAAAGGGCACGCAAGTCAAACGTATGTTCGA CTCGATAGCCGAAACGTATGATCAACTCAACCATACTCTCTCATTTGGTATCGACAAGATATGGCGCAGGAAAGGGATCG CTTTCCTGCGTCCTTTCTCTCCTAAAACGATACTGGATATCGCTACCGGTACCGGAGACTTGGCTATCTCCATGTACAAA AAGCTGCGACCCGACCATATCGTCGGTGCCGACATCTCGTTAGGCATGATGGAAGTGGGACGGAAAAAAGTAGCTGCCGC CGGTTATTCGGAGCATATATCCTTCGAGCAACAGGACTGTACGGCCTTGACCTACGAGGAAAACTCGTTCGATGCCGTAA CCGCCGCTTTCGGGGTTCGTAATTTTGAGAACATAGAGCAAGGTATCTCAGAGATGTACCGGGTGCTGAAACCCGGTGGA CATATCATGATCTTGGAACTTTCCACACCGGAACATTTTCCCATGAGACAACTCTACCAGATCTATTCAAAGACCGTCAT CCCCTTTATCGGACGTCTACTCTCTAAAGAAAAAGTCGCGTATAATTATTTGCCGGCTTCCATCAAGGTAGTTCCTCAGG GAAAGGTCATGACGGATTTACTCACCCGCCAAGGCTTCAAGCAGGCCCGTGTACGGACCTTTACCTTCGGGATCTGTTCA TTATATACAGGATCTAAAGAATAA
Upstream 100 bases:
>100_bases ATCACAGGGGAGACTTTCGTAAAAGGCGAGACTGATAACTTGCTGAACCGCATCGAGAAAAACGTTACTGAATATTTACA GAATAAATAAGATACCGCAC
Downstream 100 bases:
>100_bases ACAATAAAAAGGTTATGCAGAAATATGGCTTACTGGGATATCCCCTCGGACATTCGTTTTCTAAAACGTATTTCAACCAG AAGTTTGAGGCGGAGAAGAT
Product: ubiquinone/menaquinone biosynthesis methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTQYGSETILPYNKEEQKGTQVKRMFDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYK KLRPDHIVGADISLGMMEVGRKKVAAAGYSEHISFEQQDCTALTYEENSFDAVTAAFGVRNFENIEQGISEMYRVLKPGG HIMILELSTPEHFPMRQLYQIYSKTVIPFIGRLLSKEKVAYNYLPASIKVVPQGKVMTDLLTRQGFKQARVRTFTFGICS LYTGSKE
Sequences:
>Translated_247_residues MTQYGSETILPYNKEEQKGTQVKRMFDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYK KLRPDHIVGADISLGMMEVGRKKVAAAGYSEHISFEQQDCTALTYEENSFDAVTAAFGVRNFENIEQGISEMYRVLKPGG HIMILELSTPEHFPMRQLYQIYSKTVIPFIGRLLSKEKVAYNYLPASIKVVPQGKVMTDLLTRQGFKQARVRTFTFGICS LYTGSKE >Mature_246_residues TQYGSETILPYNKEEQKGTQVKRMFDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYKK LRPDHIVGADISLGMMEVGRKKVAAAGYSEHISFEQQDCTALTYEENSFDAVTAAFGVRNFENIEQGISEMYRVLKPGGH IMILELSTPEHFPMRQLYQIYSKTVIPFIGRLLSKEKVAYNYLPASIKVVPQGKVMTDLLTRQGFKQARVRTFTFGICSL YTGSKE
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: COG2226
COG function: function code H; Methylase involved in ubiquinone/menaquinone biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Homo sapiens, GI116063536, Length=279, Percent_Identity=30.1075268817204, Blast_Score=154, Evalue=1e-37, Organism=Escherichia coli, GI48994983, Length=246, Percent_Identity=34.1463414634146, Blast_Score=161, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17557039, Length=235, Percent_Identity=31.9148936170213, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6323526, Length=266, Percent_Identity=31.9548872180451, Blast_Score=128, Evalue=1e-30, Organism=Drosophila melanogaster, GI24641702, Length=259, Percent_Identity=32.8185328185328, Blast_Score=155, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.-
Molecular weight: Translated: 27962; Mature: 27830
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS01183 UBIE_1 ; PS01184 UBIE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQYGSETILPYNKEEQKGTQVKRMFDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC PKTILDIATGTGDLAISMYKKLRPDHIVGADISLGMMEVGRKKVAAAGYSEHISFEQQDC CCEEEEEECCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCC TALTYEENSFDAVTAAFGVRNFENIEQGISEMYRVLKPGGHIMILELSTPEHFPMRQLYQ EEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH IYSKTVIPFIGRLLSKEKVAYNYLPASIKVVPQGKVMTDLLTRQGFKQARVRTFTFGICS HHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHH LYTGSKE HCCCCCC >Mature Secondary Structure TQYGSETILPYNKEEQKGTQVKRMFDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC PKTILDIATGTGDLAISMYKKLRPDHIVGADISLGMMEVGRKKVAAAGYSEHISFEQQDC CCEEEEEECCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCC TALTYEENSFDAVTAAFGVRNFENIEQGISEMYRVLKPGGHIMILELSTPEHFPMRQLYQ EEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH IYSKTVIPFIGRLLSKEKVAYNYLPASIKVVPQGKVMTDLLTRQGFKQARVRTFTFGICS HHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHH LYTGSKE HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]