| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008596
Identifier: 150008596
GI number: 150008596
Start: 2345762
End: 2348134
Strand: Reverse
Name: 150008596
Synonym: BDI_1982
Alternate gene names: NA
Gene position: 2348134-2345762 (Counterclockwise)
Preceding gene: 150008597
Following gene: 150008595
Centisome position: 48.8
GC content: 45.55
Gene sequence:
>2373_bases ATGGTACGGTTTTTACTGCTATCGCTTTGGATTTTGGCGATAGGCGGGGGTAGTGCTCAAAAGATCTCGGGACAAACGGT TTATAAAGCCCATGTTTCCGATGCGGAGGGAAATGCCGTGGAATATGCGACCGCTGTGCTTTTATCGGGAGAAAAACAGG TAGGGGGTGCCGTGGCCAATAGTGATGGCGATTTTAGCATGGAGGCGGAGGCTGGGAAGTATAGGCTTGTTGTTCAATGT CTCGGATACGAGCCTTTACGGAAAGAGCTGATCTTACCGATAAAACGGCGGGATTCCTTGATTCTAGATCTATCGAACCA TGTTCTGAGGGAAGTCGTTGTTCGAGCGAAGAATATTGAGCGGAAGGCAGACCGCTTTATCATGTCGGTCATGCCATCTG CCGGAAAGGATGGTACGGAATTATTATCGCAGGCACCGGGTGTGTGGCTCTCGGATGGAACGATCTCGATTAATGGGGCG CAAGGGGCGAAGGTGTTTGTGGATGACCGTGAGATTCGTTTAACGGGAGAGGAGCTACTGGCTTATTTGCGGTCTTTGAA ATCGGAGGATATAAAAAGGATTGAGGTAATACCGATCGCGGGAGTTGAGTATGAGGCCTCAACTAAGGGTGGAGTGATCA AGATCTCATTGCGGCGACGTCCGGATAACGGTATGCAAGGATATGTATCTTTAGGTACGTCATTGTCTCCATCTTTACAA GGGTATATTCCATCGGCGTCCGTAAATGCACGTGTCGGGAAATGGAGCTTGAATGGAGCGGTATCGGGTACTTTTACTCC CCGGGATAAAGGAGAGATGAACTCCAACAGGGAATACGGAACGGTGGGGAATAAGTTTGTGTCTCAATCTTTGTATGATA CGGATTCCAAATATGGGAATGGACGTGTCGGGGCTATTTTCGAGATCGATTCGCTGAATAGTGTCGGAGCTGAGATCGAA TATATCAATCAAGCTTCGGACGGAACATCTTGGAGTCAAACGGATTTAGTAAAGAACTCTTATCCTATGAAGAGTACGGG GAATTATCGACAGAAGGATGATTATAACACGTTTTCCGCTACGGTCAATTACTTACGTAAAATGGATGAACGAGGCTCGA TATTTAAGGTCATAGCCGATTTCGTAAATAAGCGATCAACCGGGGATAATCTCCATACGATCCGTTATGAACAATCTAAT TGGAGCCGTGATACGGTTTACCGGAGTCATGCGGCGGCGGATTATGATATGGCGACAACCGATATTTCTTTCCAAAAGAA TTTGCGTGAAAAAATGTCTTTGAAAATCGGGGCTAAATATACCTATACGTTGATGGATGATCATTCCTTGTACGAGGGTT TAAACTCTAGTGGGAGTTGGATTCCTAATGAGGAATATGGATATACCTTGAGATATAATGAAAACATTGTAGGAGCTTAC GCCTCTTTCTCTGCGGAGATCAAGAACTGGTCGTTCGTTGCGGGGGTACGTGCGGAATATTCCAAGACGTCGGATAGAAG TGAGGATTTTAGTCGGGATTATCTGGATCTTTTTCCGAACTTGAACGTGACCTATGCGTTCGATCCCATCAAGAGGTGGA TGCTGGTAGGGCAATATGCTCGTAATATCGAACGTCCTCCGTTCTATACCTTGAATCCGAATCGTATACAGAGTTCGGAC TATAGCTACCAGATCGGGAATCCTTATCTGCGTCCTACTTATATCAATCGTTTCAGTGTAACGTTGGTTTATAATTATCG TTATACGGTGACTGTAGGAGGAAACTTGCACCACGACTTGATCCGGGAGTTCTGTAAACAAGATGTGGTGAATCCCGATG TATCCTATATCACGTATGAAAATCACGATCGGGAAAACCATTGGTTTGTAGCGGTCAGCTTGCCGTATCAACCCTTTACT TGGTGTAACTTGACAGGGAATTTCATAGGCGTACGGCAGGATATCCGGATGACGGAATTGTCTTCTTTTTCGTCTCATTA TTTAGGGTTTGCCAATGCGATCGCTACCTTTACGTTGCCGGCAGGTTTTACGGTGGAGGCCCGGTATAGTGGAACGAGCC GGCTATATTCCGGTAATAGCGAGGTCGCCCCCCGGCATACGGTTGGAGTAATGGCGAGAAAGAAACTATTGAATGATAAG CTATTGTTGGCAGTTTCAGTCGATAATATCTTTAACCAAGCCAATGAGTACGCCAGTACGTTGGATGTTTATCGAACATC ATCCCGTTATGAAAACGGACTTACTGGAAGGGTCTTTAAGGTTGCGTTGACATGGAATTTCAATAGCGGAAAGAAAGTAA GGAAGAGTAAGATTGAGATAGGTTCCGAACGGAGTCGCCTGAATGAAAAATAA
Upstream 100 bases:
>100_bases AAAGGGCCTGCGGAAGGATATGCGTTGAAAAGTTGCGAGGTGAAGGATGAGGAAGCGACTTTCAAATTAAAACTGTATTA TCCGGTAAATCAATAGAGCC
Downstream 100 bases:
>100_bases TAACCGAAAGGTTGCTCAGAAATACCAATGGCCTTATCTTTGGATACGTATTTACATTTTTACATTGAATGAAGAACAAG ATAAAATAAATACAGTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; Nb-Dependent Receptor Plug; NB Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; NB-Dependent Receptor Exported Protein; Outer Membrane Receptor Family Transporter; Nb-Dependent Outer Membrane Receptor; NB-Dependent Receptor Plug Domain-Containing Protein; Outer Membrane Receptor Protein Mostly Fe Transport; Protein Containing nB-Dependent Receptor Plug Domain
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MVRFLLLSLWILAIGGGSAQKISGQTVYKAHVSDAEGNAVEYATAVLLSGEKQVGGAVANSDGDFSMEAEAGKYRLVVQC LGYEPLRKELILPIKRRDSLILDLSNHVLREVVVRAKNIERKADRFIMSVMPSAGKDGTELLSQAPGVWLSDGTISINGA QGAKVFVDDREIRLTGEELLAYLRSLKSEDIKRIEVIPIAGVEYEASTKGGVIKISLRRRPDNGMQGYVSLGTSLSPSLQ GYIPSASVNARVGKWSLNGAVSGTFTPRDKGEMNSNREYGTVGNKFVSQSLYDTDSKYGNGRVGAIFEIDSLNSVGAEIE YINQASDGTSWSQTDLVKNSYPMKSTGNYRQKDDYNTFSATVNYLRKMDERGSIFKVIADFVNKRSTGDNLHTIRYEQSN WSRDTVYRSHAAADYDMATTDISFQKNLREKMSLKIGAKYTYTLMDDHSLYEGLNSSGSWIPNEEYGYTLRYNENIVGAY ASFSAEIKNWSFVAGVRAEYSKTSDRSEDFSRDYLDLFPNLNVTYAFDPIKRWMLVGQYARNIERPPFYTLNPNRIQSSD YSYQIGNPYLRPTYINRFSVTLVYNYRYTVTVGGNLHHDLIREFCKQDVVNPDVSYITYENHDRENHWFVAVSLPYQPFT WCNLTGNFIGVRQDIRMTELSSFSSHYLGFANAIATFTLPAGFTVEARYSGTSRLYSGNSEVAPRHTVGVMARKKLLNDK LLLAVSVDNIFNQANEYASTLDVYRTSSRYENGLTGRVFKVALTWNFNSGKKVRKSKIEIGSERSRLNEK
Sequences:
>Translated_790_residues MVRFLLLSLWILAIGGGSAQKISGQTVYKAHVSDAEGNAVEYATAVLLSGEKQVGGAVANSDGDFSMEAEAGKYRLVVQC LGYEPLRKELILPIKRRDSLILDLSNHVLREVVVRAKNIERKADRFIMSVMPSAGKDGTELLSQAPGVWLSDGTISINGA QGAKVFVDDREIRLTGEELLAYLRSLKSEDIKRIEVIPIAGVEYEASTKGGVIKISLRRRPDNGMQGYVSLGTSLSPSLQ GYIPSASVNARVGKWSLNGAVSGTFTPRDKGEMNSNREYGTVGNKFVSQSLYDTDSKYGNGRVGAIFEIDSLNSVGAEIE YINQASDGTSWSQTDLVKNSYPMKSTGNYRQKDDYNTFSATVNYLRKMDERGSIFKVIADFVNKRSTGDNLHTIRYEQSN WSRDTVYRSHAAADYDMATTDISFQKNLREKMSLKIGAKYTYTLMDDHSLYEGLNSSGSWIPNEEYGYTLRYNENIVGAY ASFSAEIKNWSFVAGVRAEYSKTSDRSEDFSRDYLDLFPNLNVTYAFDPIKRWMLVGQYARNIERPPFYTLNPNRIQSSD YSYQIGNPYLRPTYINRFSVTLVYNYRYTVTVGGNLHHDLIREFCKQDVVNPDVSYITYENHDRENHWFVAVSLPYQPFT WCNLTGNFIGVRQDIRMTELSSFSSHYLGFANAIATFTLPAGFTVEARYSGTSRLYSGNSEVAPRHTVGVMARKKLLNDK LLLAVSVDNIFNQANEYASTLDVYRTSSRYENGLTGRVFKVALTWNFNSGKKVRKSKIEIGSERSRLNEK >Mature_790_residues MVRFLLLSLWILAIGGGSAQKISGQTVYKAHVSDAEGNAVEYATAVLLSGEKQVGGAVANSDGDFSMEAEAGKYRLVVQC LGYEPLRKELILPIKRRDSLILDLSNHVLREVVVRAKNIERKADRFIMSVMPSAGKDGTELLSQAPGVWLSDGTISINGA QGAKVFVDDREIRLTGEELLAYLRSLKSEDIKRIEVIPIAGVEYEASTKGGVIKISLRRRPDNGMQGYVSLGTSLSPSLQ GYIPSASVNARVGKWSLNGAVSGTFTPRDKGEMNSNREYGTVGNKFVSQSLYDTDSKYGNGRVGAIFEIDSLNSVGAEIE YINQASDGTSWSQTDLVKNSYPMKSTGNYRQKDDYNTFSATVNYLRKMDERGSIFKVIADFVNKRSTGDNLHTIRYEQSN WSRDTVYRSHAAADYDMATTDISFQKNLREKMSLKIGAKYTYTLMDDHSLYEGLNSSGSWIPNEEYGYTLRYNENIVGAY ASFSAEIKNWSFVAGVRAEYSKTSDRSEDFSRDYLDLFPNLNVTYAFDPIKRWMLVGQYARNIERPPFYTLNPNRIQSSD YSYQIGNPYLRPTYINRFSVTLVYNYRYTVTVGGNLHHDLIREFCKQDVVNPDVSYITYENHDRENHWFVAVSLPYQPFT WCNLTGNFIGVRQDIRMTELSSFSSHYLGFANAIATFTLPAGFTVEARYSGTSRLYSGNSEVAPRHTVGVMARKKLLNDK LLLAVSVDNIFNQANEYASTLDVYRTSSRYENGLTGRVFKVALTWNFNSGKKVRKSKIEIGSERSRLNEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88784; Mature: 88784
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRFLLLSLWILAIGGGSAQKISGQTVYKAHVSDAEGNAVEYATAVLLSGEKQVGGAVAN CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCHHHCCEEEC SDGDFSMEAEAGKYRLVVQCLGYEPLRKELILPIKRRDSLILDLSNHVLREVVVRAKNIE CCCCEEEECCCCCEEEEEEECCCCHHHHHHCCEECCCCCEEEEHHHHHHHHHHHHHHCCH RKADRFIMSVMPSAGKDGTELLSQAPGVWLSDGTISINGAQGAKVFVDDREIRLTGEELL HHHHHHHHHHCCCCCCCHHHHHHHCCCCEEECCEEEEECCCCCEEEEECCEEEEEHHHHH AYLRSLKSEDIKRIEVIPIAGVEYEASTKGGVIKISLRRRPDNGMQGYVSLGTSLSPSLQ HHHHHHCCCCCCEEEEEEECCCEEECCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCC GYIPSASVNARVGKWSLNGAVSGTFTPRDKGEMNSNREYGTVGNKFVSQSLYDTDSKYGN CCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC GRVGAIFEIDSLNSVGAEIEYINQASDGTSWSQTDLVKNSYPMKSTGNYRQKDDYNTFSA CEEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHH TVNYLRKMDERGSIFKVIADFVNKRSTGDNLHTIRYEQSNWSRDTVYRSHAAADYDMATT HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEC DISFQKNLREKMSLKIGAKYTYTLMDDHSLYEGLNSSGSWIPNEEYGYTLRYNENIVGAY CCHHHHHHHHHHEEEECCEEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEE ASFSAEIKNWSFVAGVRAEYSKTSDRSEDFSRDYLDLFPNLNVTYAFDPIKRWMLVGQYA ECCCHHCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH RNIERPPFYTLNPNRIQSSDYSYQIGNPYLRPTYINRFSVTLVYNYRYTVTVGGNLHHDL HCCCCCCEEECCCCCCCCCCCEEECCCCEECCEEECEEEEEEEEEEEEEEEECCCCCHHH IREFCKQDVVNPDVSYITYENHDRENHWFVAVSLPYQPFTWCNLTGNFIGVRQDIRMTEL HHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCCHHHH SSFSSHYLGFANAIATFTLPAGFTVEARYSGTSRLYSGNSEVAPRHTVGVMARKKLLNDK HHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCCE LLLAVSVDNIFNQANEYASTLDVYRTSSRYENGLTGRVFKVALTWNFNSGKKVRKSKIEI EEEEEEHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHC GSERSRLNEK CCHHHHCCCC >Mature Secondary Structure MVRFLLLSLWILAIGGGSAQKISGQTVYKAHVSDAEGNAVEYATAVLLSGEKQVGGAVAN CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCHHHCCEEEC SDGDFSMEAEAGKYRLVVQCLGYEPLRKELILPIKRRDSLILDLSNHVLREVVVRAKNIE CCCCEEEECCCCCEEEEEEECCCCHHHHHHCCEECCCCCEEEEHHHHHHHHHHHHHHCCH RKADRFIMSVMPSAGKDGTELLSQAPGVWLSDGTISINGAQGAKVFVDDREIRLTGEELL HHHHHHHHHHCCCCCCCHHHHHHHCCCCEEECCEEEEECCCCCEEEEECCEEEEEHHHHH AYLRSLKSEDIKRIEVIPIAGVEYEASTKGGVIKISLRRRPDNGMQGYVSLGTSLSPSLQ HHHHHHCCCCCCEEEEEEECCCEEECCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCC GYIPSASVNARVGKWSLNGAVSGTFTPRDKGEMNSNREYGTVGNKFVSQSLYDTDSKYGN CCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC GRVGAIFEIDSLNSVGAEIEYINQASDGTSWSQTDLVKNSYPMKSTGNYRQKDDYNTFSA CEEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHH TVNYLRKMDERGSIFKVIADFVNKRSTGDNLHTIRYEQSNWSRDTVYRSHAAADYDMATT HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEC DISFQKNLREKMSLKIGAKYTYTLMDDHSLYEGLNSSGSWIPNEEYGYTLRYNENIVGAY CCHHHHHHHHHHEEEECCEEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEE ASFSAEIKNWSFVAGVRAEYSKTSDRSEDFSRDYLDLFPNLNVTYAFDPIKRWMLVGQYA ECCCHHCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH RNIERPPFYTLNPNRIQSSDYSYQIGNPYLRPTYINRFSVTLVYNYRYTVTVGGNLHHDL HCCCCCCEEECCCCCCCCCCCEEECCCCEECCEEECEEEEEEEEEEEEEEEECCCCCHHH IREFCKQDVVNPDVSYITYENHDRENHWFVAVSLPYQPFTWCNLTGNFIGVRQDIRMTEL HHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCCHHHH SSFSSHYLGFANAIATFTLPAGFTVEARYSGTSRLYSGNSEVAPRHTVGVMARKKLLNDK HHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCCE LLLAVSVDNIFNQANEYASTLDVYRTSSRYENGLTGRVFKVALTWNFNSGKKVRKSKIEI EEEEEEHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHC GSERSRLNEK CCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA