| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150008517
Identifier: 150008517
GI number: 150008517
Start: 2260486
End: 2261340
Strand: Direct
Name: 150008517
Synonym: BDI_1903
Alternate gene names: NA
Gene position: 2260486-2261340 (Clockwise)
Preceding gene: 150008516
Following gene: 150008518
Centisome position: 46.98
GC content: 44.91
Gene sequence:
>855_bases ATGATAAGACATATCTATAAAATAATGATAGCGATCGTTTGCTGCCTATTGGCTATTCCAAGCGAAGCGCAAACGAAGGC CGAGAAGAACGGATGGCGTCTAGGGATGCAATCCTATAGTTTCCACCTGTTCCCTTTGACGGAAGCTCTCGATAAGACAC AAGAACTGGGATTGAAATACATCGAGATTTATCCCGGCCATAAGCTCGGTGGTAAATGGGGAGATAAAGTATTCGATTTC AACCTTGATGCGCAGACCCAGAAAGAGATCAAGGAGCTTGCGGCATCCAAAGGTATCAAGATCGTAGGAACCGGGGTGTA TGTAGCCGAAAAGTCGTCCGATTGGGAAAAGATGTTCAAATTCGCGAAAGCGATGGACCTAGAGTTCATTACTTGCGAAC CGGCTTTAAGTGACTGGGACTTGGTAGAAAAATTGTCCAAGCAATACAACATTAAGATCTCCGTCCATAATCACCCGCAG CCTTCCGACTACTGGAAACCTGAGAACCTGTTGAAAGCCATCTCCGGACGCAGTCAATCGCTTGGTTCTTGTTCCGATGT GGGGCATTGGCGTCGGGAGGGGCTAAACCAGATTGATTGCTTAAAGCAACTCAAAGGTCGAATCATCTCTTTGCATTTCA AGGATATCGCCCCGAAAAAAGCAGGAGAGAATGAGCAGCACGACGTGATCTGGGGCACAGGCATCCTAGATGTAAAGGGA ATGTTGAAAGAACTCAAATCCCAGAATTTCAAGGGAGTATTCTCTATCGAGTATGAATACAACTGGGAAAACTCTGTACC GGACATTAAAGAATGTATCCAATACTTCAATAAAACCGCAAACGAAATCTTATAA
Upstream 100 bases:
>100_bases TAACGCTGCGGAAATGGCCAACGAATGGATCAAGCATACGTATAACAACGGTTTCTCTTTGCCGGATATGCCAAGATAAA CCTTTTAATAACAGCCAAAT
Downstream 100 bases:
>100_bases TAGGGATTAGCATTAATTGACAGGTAGTAAGCGTATAGGCCCAAGGGACGTTCTCCTAGCCTATACGCTCCACCTTTCTA ATAATACACGGGAATAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel; Sugar Phosphate Isomerases/Epimerases; Xylose Isomerase-Like Protein
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MIRHIYKIMIAIVCCLLAIPSEAQTKAEKNGWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDF NLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQ PSDYWKPENLLKAISGRSQSLGSCSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKG MLKELKSQNFKGVFSIEYEYNWENSVPDIKECIQYFNKTANEIL
Sequences:
>Translated_284_residues MIRHIYKIMIAIVCCLLAIPSEAQTKAEKNGWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDF NLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQ PSDYWKPENLLKAISGRSQSLGSCSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKG MLKELKSQNFKGVFSIEYEYNWENSVPDIKECIQYFNKTANEIL >Mature_284_residues MIRHIYKIMIAIVCCLLAIPSEAQTKAEKNGWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDF NLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQ PSDYWKPENLLKAISGRSQSLGSCSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKG MLKELKSQNFKGVFSIEYEYNWENSVPDIKECIQYFNKTANEIL
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32479; Mature: 32479
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRHIYKIMIAIVCCLLAIPSEAQTKAEKNGWRLGMQSYSFHLFPLTEALDKTQELGLKY CHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCEEEEEEHHHHHHHHHHCCCEE IEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFK EEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHH FAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISGRSQS HHHHCCCEEEEECCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCC LGSCSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKG CCCHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEHHCCCCCCCCCCCCCEEEECCHHHHHH MLKELKSQNFKGVFSIEYEYNWENSVPDIKECIQYFNKTANEIL HHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRHIYKIMIAIVCCLLAIPSEAQTKAEKNGWRLGMQSYSFHLFPLTEALDKTQELGLKY CHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCEEEEEEHHHHHHHHHHCCCEE IEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFK EEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHH FAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISGRSQS HHHHCCCEEEEECCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCC LGSCSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKG CCCHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEHHCCCCCCCCCCCCCEEEECCHHHHHH MLKELKSQNFKGVFSIEYEYNWENSVPDIKECIQYFNKTANEIL HHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA