BacMap

Definition	Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession	NC_009615
Length	4,811,379

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The map label for this gene is yhaQ [H]

Identifier: 150008465

GI number: 150008465

Start: 2203937

End: 2204809

Strand: Direct

Name: yhaQ [H]

Synonym: BDI_1849

Alternate gene names: 150008465

Gene position: 2203937-2204809 (Clockwise)

Preceding gene: 150008464

Following gene: 150008466

Centisome position: 45.81

GC content: 46.96

Gene sequence:

>873_bases
ATGAATTTCCTTGAGACAGAAAACGTGGTAAAACAGTACGCCGGGCATCTGGCGCTGAACAAGGTAAGTATCCAAGTTCC
TCAAGGAACAATCTTTGGATTACTGGGGCCTAACGGAGCGGGCAAGACGACCTTGATCCGGATCATCAACCGGATTACGG
CACCGGATAGCGGAATCGTTCGCTTCAACGGCCATGAATCCAGCCCGGAAGACATCTACCAGATCGGTTATTTGCCGGAA
GAGAGAGGGTTGTATAAAAAGATGAAAGTCGGGGAGCAGGCGATCTATCTGGCACAATTGAAAGGTCTCTCCTACCCAGA
GGCACGCAGTCGTTTGACCCGTTGGTTCGAGAAATTTGACATCATGCCTTGGTGGAATCGCAAACTGGAAGAGCTGTCGA
AAGGTATGCAGCAGAAAGTACAGTTCATCATTACCGTGATACACGAACCCGAGCTATTGATCTTTGACGAGCCATTTAGC
GGATTCGATCCGGTCAACGCCGATCGCCTTAAACAAGAGATATTGGAATTGAAGGCAGCCGGACATACCATTATATTCTC
AACTCACAACATGTCCTCCGTTGAGGAGATTTGTGACGAGATTGCTTTAATCAATCGCTCTGAGGTCGTCCTGTCCGGCA
ATGTCAAGGAGGTACGGGAACGGTTTAAGAGTAATACCTATATATTAAATGTACGCAAGGAGACTGGAGGTATTGAGGAG
TTAAGGATACGCAAGGAAGAAAATATCAGTAACTCCGATTGGCTTACCCGGCTGGCGTCCCAATATGAGATTCTTTCCTT
CACGGAGGAGATCCCTTCTATGAATGACATTTTTATCAACACCGTTTCCGGTACAAACACATCAAAGGTATGA

Upstream 100 bases:

>100_bases
GATTTAATGAAACAGAATGCCCACCTCAACGAGATCAAGAACGTGCTCTGCAAAGAGCTGGGTGAGCGTATCGTATTAAA
AATGTAATAAAAAAACATCT

Downstream 100 bases:

>100_bases
GCAAAATTGGATTAATCATCAAACGGGAATATCTCCGGAGAGTAAGTAAAAAGTCATTTATCCTGCTCACGTTCCTCACA
CCGTTTCTATTCGCTGCACT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNFLETENVVKQYAGHLALNKVSIQVPQGTIFGLLGPNGAGKTTLIRIINRITAPDSGIVRFNGHESSPEDIYQIGYLPE
ERGLYKKMKVGEQAIYLAQLKGLSYPEARSRLTRWFEKFDIMPWWNRKLEELSKGMQQKVQFIITVIHEPELLIFDEPFS
GFDPVNADRLKQEILELKAAGHTIIFSTHNMSSVEEICDEIALINRSEVVLSGNVKEVRERFKSNTYILNVRKETGGIEE
LRIRKEENISNSDWLTRLASQYEILSFTEEIPSMNDIFINTVSGTNTSKV

Sequences:

>Translated_290_residues
MNFLETENVVKQYAGHLALNKVSIQVPQGTIFGLLGPNGAGKTTLIRIINRITAPDSGIVRFNGHESSPEDIYQIGYLPE
ERGLYKKMKVGEQAIYLAQLKGLSYPEARSRLTRWFEKFDIMPWWNRKLEELSKGMQQKVQFIITVIHEPELLIFDEPFS
GFDPVNADRLKQEILELKAAGHTIIFSTHNMSSVEEICDEIALINRSEVVLSGNVKEVRERFKSNTYILNVRKETGGIEE
LRIRKEENISNSDWLTRLASQYEILSFTEEIPSMNDIFINTVSGTNTSKV
>Mature_290_residues
MNFLETENVVKQYAGHLALNKVSIQVPQGTIFGLLGPNGAGKTTLIRIINRITAPDSGIVRFNGHESSPEDIYQIGYLPE
ERGLYKKMKVGEQAIYLAQLKGLSYPEARSRLTRWFEKFDIMPWWNRKLEELSKGMQQKVQFIITVIHEPELLIFDEPFS
GFDPVNADRLKQEILELKAAGHTIIFSTHNMSSVEEICDEIALINRSEVVLSGNVKEVRERFKSNTYILNVRKETGGIEE
LRIRKEENISNSDWLTRLASQYEILSFTEEIPSMNDIFINTVSGTNTSKV

Specific function: Unknown

COG id: COG4152

COG function: function code R; ABC-type uncharacterized transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=252, Percent_Identity=28.968253968254, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI27436953, Length=241, Percent_Identity=29.8755186721992, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI105990541, Length=232, Percent_Identity=32.3275862068966, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI27881501, Length=212, Percent_Identity=28.7735849056604, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI30795238, Length=212, Percent_Identity=28.7735849056604, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI6005701, Length=245, Percent_Identity=27.3469387755102, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI27477115, Length=227, Percent_Identity=27.3127753303965, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI45446740, Length=244, Percent_Identity=26.6393442622951, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI47078218, Length=244, Percent_Identity=26.6393442622951, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI116734710, Length=239, Percent_Identity=27.6150627615063, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI27262624, Length=251, Percent_Identity=26.2948207171315, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI27262626, Length=251, Percent_Identity=26.2948207171315, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI21536376, Length=294, Percent_Identity=26.530612244898, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI31657092, Length=216, Percent_Identity=25.9259259259259, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI150417984, Length=218, Percent_Identity=28.8990825688073, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI9955963, Length=240, Percent_Identity=28.3333333333333, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI46592915, Length=205, Percent_Identity=25.3658536585366, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI46592956, Length=205, Percent_Identity=25.3658536585366, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI46592898, Length=205, Percent_Identity=25.3658536585366, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI46592971, Length=205, Percent_Identity=25.3658536585366, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI46592978, Length=205, Percent_Identity=25.3658536585366, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI46592964, Length=205, Percent_Identity=25.3658536585366, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI87081782, Length=294, Percent_Identity=27.5510204081633, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI48994943, Length=228, Percent_Identity=31.5789473684211, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1786319, Length=299, Percent_Identity=28.0936454849498, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=27.2727272727273, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1789593, Length=224, Percent_Identity=27.6785714285714, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI87081791, Length=221, Percent_Identity=28.9592760180996, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787792, Length=221, Percent_Identity=30.316742081448, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1788450, Length=261, Percent_Identity=27.9693486590038, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787089, Length=214, Percent_Identity=27.5700934579439, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788761, Length=213, Percent_Identity=28.169014084507, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786398, Length=214, Percent_Identity=32.2429906542056, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789032, Length=224, Percent_Identity=25.8928571428571, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788225, Length=229, Percent_Identity=26.6375545851528, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789864, Length=238, Percent_Identity=26.890756302521, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1787712, Length=209, Percent_Identity=26.7942583732057, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789586, Length=227, Percent_Identity=28.1938325991189, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790739, Length=223, Percent_Identity=27.3542600896861, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788165, Length=229, Percent_Identity=28.82096069869, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789672, Length=213, Percent_Identity=28.169014084507, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790190, Length=229, Percent_Identity=24.0174672489083, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=24.2152466367713, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787370, Length=217, Percent_Identity=24.4239631336406, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790467, Length=222, Percent_Identity=25.6756756756757, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1788210, Length=222, Percent_Identity=31.0810810810811, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48995001, Length=216, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787759, Length=241, Percent_Identity=27.3858921161826, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790525, Length=228, Percent_Identity=23.6842105263158, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786253, Length=224, Percent_Identity=26.3392857142857, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788472, Length=216, Percent_Identity=26.8518518518519, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789873, Length=196, Percent_Identity=27.0408163265306, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786872, Length=212, Percent_Identity=25.4716981132075, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1786563, Length=224, Percent_Identity=24.1071428571429, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788644, Length=227, Percent_Identity=27.7533039647577, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI87081834, Length=220, Percent_Identity=26.3636363636364, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082267, Length=229, Percent_Identity=24.4541484716157, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790544, Length=242, Percent_Identity=21.4876033057851, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786345, Length=227, Percent_Identity=23.7885462555066, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87082268, Length=219, Percent_Identity=26.4840182648402, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786803, Length=231, Percent_Identity=22.9437229437229, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788897, Length=217, Percent_Identity=25.3456221198157, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI48994883, Length=222, Percent_Identity=27.4774774774775, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1789991, Length=212, Percent_Identity=25, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787500, Length=217, Percent_Identity=27.6497695852535, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=252, Percent_Identity=26.984126984127, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17510237, Length=233, Percent_Identity=26.1802575107296, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17565586, Length=234, Percent_Identity=27.7777777777778, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71983523, Length=235, Percent_Identity=28.936170212766, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71983510, Length=235, Percent_Identity=28.936170212766, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71983516, Length=235, Percent_Identity=28.936170212766, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193202349, Length=213, Percent_Identity=24.8826291079812, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=235, Percent_Identity=24.2553191489362, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17539902, Length=222, Percent_Identity=24.3243243243243, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6319856, Length=225, Percent_Identity=28.8888888888889, Blast_Score=83, Evalue=5e-17,
Organism=Drosophila melanogaster, GI116007328, Length=243, Percent_Identity=28.8065843621399, Blast_Score=117, Evalue=6e-27,
Organism=Drosophila melanogaster, GI28574150, Length=243, Percent_Identity=28.8065843621399, Blast_Score=117, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24650855, Length=176, Percent_Identity=34.6590909090909, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24643674, Length=244, Percent_Identity=27.0491803278689, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24650853, Length=176, Percent_Identity=34.6590909090909, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI221512771, Length=220, Percent_Identity=28.1818181818182, Blast_Score=104, Evalue=8e-23,
Organism=Drosophila melanogaster, GI281362751, Length=176, Percent_Identity=34.6590909090909, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI221500365, Length=205, Percent_Identity=26.8292682926829, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI116007184, Length=217, Percent_Identity=26.7281105990783, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI85725262, Length=216, Percent_Identity=28.7037037037037, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI28573573, Length=226, Percent_Identity=23.0088495575221, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28573571, Length=226, Percent_Identity=23.0088495575221, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24666092, Length=241, Percent_Identity=25.7261410788382, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24582014, Length=205, Percent_Identity=29.2682926829268, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24582012, Length=205, Percent_Identity=29.2682926829268, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI85726357, Length=212, Percent_Identity=28.3018867924528, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648314, Length=220, Percent_Identity=23.1818181818182, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI281363262, Length=249, Percent_Identity=24.0963855421687, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24653245, Length=249, Percent_Identity=24.0963855421687, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571209, Length=220, Percent_Identity=22.7272727272727, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85816269, Length=206, Percent_Identity=25.2427184466019, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580553, Length=206, Percent_Identity=25.2427184466019, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85724864, Length=206, Percent_Identity=25.2427184466019, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580555, Length=206, Percent_Identity=25.2427184466019, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221500419, Length=220, Percent_Identity=26.3636363636364, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17136592, Length=224, Percent_Identity=25.4464285714286, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574744, Length=220, Percent_Identity=22.7272727272727, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 33097; Mature: 33097

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLETENVVKQYAGHLALNKVSIQVPQGTIFGLLGPNGAGKTTLIRIINRITAPDSGIV
CCCCHHHHHHHHHHCCEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEE
RFNGHESSPEDIYQIGYLPEERGLYKKMKVGEQAIYLAQLKGLSYPEARSRLTRWFEKFD
EECCCCCCHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
IMPWWNRKLEELSKGMQQKVQFIITVIHEPELLIFDEPFSGFDPVNADRLKQEILELKAA
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC
GHTIIFSTHNMSSVEEICDEIALINRSEVVLSGNVKEVRERFKSNTYILNVRKETGGIEE
CCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCEEEEEECCCCCHHH
LRIRKEENISNSDWLTRLASQYEILSFTEEIPSMNDIFINTVSGTNTSKV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MNFLETENVVKQYAGHLALNKVSIQVPQGTIFGLLGPNGAGKTTLIRIINRITAPDSGIV
CCCCHHHHHHHHHHCCEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEE
RFNGHESSPEDIYQIGYLPEERGLYKKMKVGEQAIYLAQLKGLSYPEARSRLTRWFEKFD
EECCCCCCHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
IMPWWNRKLEELSKGMQQKVQFIITVIHEPELLIFDEPFSGFDPVNADRLKQEILELKAA
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC
GHTIIFSTHNMSSVEEICDEIALINRSEVVLSGNVKEVRERFKSNTYILNVRKETGGIEE
CCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCEEEEEECCCCCHHH
LRIRKEENISNSDWLTRLASQYEILSFTEEIPSMNDIFINTVSGTNTSKV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]