| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yeiJ [C]
Identifier: 150008443
GI number: 150008443
Start: 2175970
End: 2177286
Strand: Direct
Name: yeiJ [C]
Synonym: BDI_1825
Alternate gene names: 150008443
Gene position: 2175970-2177286 (Clockwise)
Preceding gene: 150008442
Following gene: 150008444
Centisome position: 45.23
GC content: 45.25
Gene sequence:
>1317_bases ATGATTGGAGAACAAGGAGGATTCGGACTGGTCTCACTTTTAAGAGGTCTGCTTGGGATCATTACGATTTTAGGTATCGC CTATGCGATGAGTTATGATCGTAAACGGATCGATTGGAAATTAGTAGGTGGAGGTTTGTTCATGCAGATCGTATTCGCCT TGGCGGTTTTATATGTGCCGTTCGTCGGAAGCCTATTGGAAGGATGTGGCAAGATATTTGTTAAGTTGATGGACTTCACG GATGCCGGTCTTACTTTCTTATTAGGCCCGTATGCCTCTAAAGCGGCAGGATTCAGTTTCTTGCTTCATTCGCTACCGAT TGTTATTTTCTTCTCCGCCTTGGTTTCCATGTTTTACCATTGGGGGATTATCCAGAAAGTAGTCGGTGCCTTTGCGTGGG TATTGCGTAAATTCATGAATATATCCGGCTCGGAGGGATTAGTGGCCGCCGGTAATATTTTTATGGGAATGACAGAATCT CCTGTGTTGATCAAGAATTACCTGCCGACAATGAATCGTTCGGAGATATTTTTGGTCATGGTATCCGGAATGGGTACGAT CGCCGGTTCCGTAATGGGTACTTACATAGGTATGTTGGGAGGAACAGACCCGGCGGCGAAGGTTTTATTCGCCACTCACT TGCTCTCGGCTTCCGTAATGGCAGTACCGGGTTCAATCGTTTTAGCGAAAATGCTTTGTCCGCAGACGGAAGAAGCCACG GACCATGTAGCTATCTCCGGCAAGGAAAAAGAGAACTCGAATATTCTAGATGCCATCTCATCGGGTACGGTTACCGGCGT AAAGTTGATGACGAATATTGCCGCGATGTTATTGGTATTCATATCCCTTGTAGCGTTAGCGAATTATATTACGGAAGGTG TGATAGGGCGTTATACCGGACTGAATGACTGGATTGTAAAGATTACGGACGGTAAGGCGCAGGGCTTGACCTTCCAATTT ATACTGGGCGTAATCACCTCTCCTTTCATGTGGTTGATCGGGGTTCCCAGCCAAGACATCATGTTAGTTGGTTCTTTATT GGGACAAAAGACCATATTGAACGAATTTGTCGCCTATTTCCAATTACAGCAATGGAAAGATGCCGGATTATTCATGTATG AGAAATCGATCTTGATGTCTACTTATATCCTTTGCGGATTCGCTAATATATCGTCTATCGGTATCTTATTAGGCGGATTG GGCGTATTAGCCCCGGAAAAACGAGGATTAATTTCACGTATCGGCGTACCGGCTATGATCGGCGGAGCCTTGGTCTCTGT GCTATCGGCTACTATAATTGGTATGATCCTTGGGTAA
Upstream 100 bases:
>100_bases ACGAGCGATTGGAAGACGCTATAGCGGACGAAAATTACGAATACGCGAAAATGTATAAAGACGAGTTGCGCCGTCGAGAA GAAGAGGAGGACACAAACAA
Downstream 100 bases:
>100_bases TTGAAAATTGAGAATTGAGAATTGAAAATTAGATGGTCATGCAGATTTTTTATACACCAGATATAGCTATCAAGCCGGAA TTACCGGAAGAAGAAGCAGG
Product: nucleoside transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MIGEQGGFGLVSLLRGLLGIITILGIAYAMSYDRKRIDWKLVGGGLFMQIVFALAVLYVPFVGSLLEGCGKIFVKLMDFT DAGLTFLLGPYASKAAGFSFLLHSLPIVIFFSALVSMFYHWGIIQKVVGAFAWVLRKFMNISGSEGLVAAGNIFMGMTES PVLIKNYLPTMNRSEIFLVMVSGMGTIAGSVMGTYIGMLGGTDPAAKVLFATHLLSASVMAVPGSIVLAKMLCPQTEEAT DHVAISGKEKENSNILDAISSGTVTGVKLMTNIAAMLLVFISLVALANYITEGVIGRYTGLNDWIVKITDGKAQGLTFQF ILGVITSPFMWLIGVPSQDIMLVGSLLGQKTILNEFVAYFQLQQWKDAGLFMYEKSILMSTYILCGFANISSIGILLGGL GVLAPEKRGLISRIGVPAMIGGALVSVLSATIIGMILG
Sequences:
>Translated_438_residues MIGEQGGFGLVSLLRGLLGIITILGIAYAMSYDRKRIDWKLVGGGLFMQIVFALAVLYVPFVGSLLEGCGKIFVKLMDFT DAGLTFLLGPYASKAAGFSFLLHSLPIVIFFSALVSMFYHWGIIQKVVGAFAWVLRKFMNISGSEGLVAAGNIFMGMTES PVLIKNYLPTMNRSEIFLVMVSGMGTIAGSVMGTYIGMLGGTDPAAKVLFATHLLSASVMAVPGSIVLAKMLCPQTEEAT DHVAISGKEKENSNILDAISSGTVTGVKLMTNIAAMLLVFISLVALANYITEGVIGRYTGLNDWIVKITDGKAQGLTFQF ILGVITSPFMWLIGVPSQDIMLVGSLLGQKTILNEFVAYFQLQQWKDAGLFMYEKSILMSTYILCGFANISSIGILLGGL GVLAPEKRGLISRIGVPAMIGGALVSVLSATIIGMILG >Mature_438_residues MIGEQGGFGLVSLLRGLLGIITILGIAYAMSYDRKRIDWKLVGGGLFMQIVFALAVLYVPFVGSLLEGCGKIFVKLMDFT DAGLTFLLGPYASKAAGFSFLLHSLPIVIFFSALVSMFYHWGIIQKVVGAFAWVLRKFMNISGSEGLVAAGNIFMGMTES PVLIKNYLPTMNRSEIFLVMVSGMGTIAGSVMGTYIGMLGGTDPAAKVLFATHLLSASVMAVPGSIVLAKMLCPQTEEAT DHVAISGKEKENSNILDAISSGTVTGVKLMTNIAAMLLVFISLVALANYITEGVIGRYTGLNDWIVKITDGKAQGLTFQF ILGVITSPFMWLIGVPSQDIMLVGSLLGQKTILNEFVAYFQLQQWKDAGLFMYEKSILMSTYILCGFANISSIGILLGGL GVLAPEKRGLISRIGVPAMIGGALVSVLSATIIGMILG
Specific function: Unknown
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI227116277, Length=435, Percent_Identity=36.0919540229885, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI42542381, Length=432, Percent_Identity=34.4907407407407, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI11545853, Length=381, Percent_Identity=34.9081364829396, Blast_Score=220, Evalue=2e-57, Organism=Escherichia coli, GI1788485, Length=435, Percent_Identity=32.183908045977, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI1788488, Length=435, Percent_Identity=33.1034482758621, Blast_Score=222, Evalue=3e-59, Organism=Escherichia coli, GI1788737, Length=420, Percent_Identity=28.3333333333333, Blast_Score=149, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17560276, Length=416, Percent_Identity=29.3269230769231, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI71991794, Length=432, Percent_Identity=29.1666666666667, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI25146537, Length=218, Percent_Identity=27.0642201834862, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI45552519, Length=411, Percent_Identity=31.6301703163017, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI45552517, Length=411, Percent_Identity=31.6301703163017, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI19921868, Length=411, Percent_Identity=31.6301703163017, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI281360430, Length=428, Percent_Identity=30.3738317757009, Blast_Score=195, Evalue=6e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 46686; Mature: 46686
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGEQGGFGLVSLLRGLLGIITILGIAYAMSYDRKRIDWKLVGGGLFMQIVFALAVLYVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHH FVGSLLEGCGKIFVKLMDFTDAGLTFLLGPYASKAAGFSFLLHSLPIVIFFSALVSMFYH HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGIIQKVVGAFAWVLRKFMNISGSEGLVAAGNIFMGMTESPVLIKNYLPTMNRSEIFLVM HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCCCCCHHHHHCCCCCCCCEEEEE VSGMGTIAGSVMGTYIGMLGGTDPAAKVLFATHLLSASVMAVPGSIVLAKMLCPQTEEAT ECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC DHVAISGKEKENSNILDAISSGTVTGVKLMTNIAAMLLVFISLVALANYITEGVIGRYTG CCEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LNDWIVKITDGKAQGLTFQFILGVITSPFMWLIGVPSQDIMLVGSLLGQKTILNEFVAYF CCCEEEEEECCCCCCHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHH QLQQWKDAGLFMYEKSILMSTYILCGFANISSIGILLGGLGVLAPEKRGLISRIGVPAMI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHH GGALVSVLSATIIGMILG HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIGEQGGFGLVSLLRGLLGIITILGIAYAMSYDRKRIDWKLVGGGLFMQIVFALAVLYVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHH FVGSLLEGCGKIFVKLMDFTDAGLTFLLGPYASKAAGFSFLLHSLPIVIFFSALVSMFYH HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGIIQKVVGAFAWVLRKFMNISGSEGLVAAGNIFMGMTESPVLIKNYLPTMNRSEIFLVM HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCCCCCCHHHHHCCCCCCCCEEEEE VSGMGTIAGSVMGTYIGMLGGTDPAAKVLFATHLLSASVMAVPGSIVLAKMLCPQTEEAT ECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC DHVAISGKEKENSNILDAISSGTVTGVKLMTNIAAMLLVFISLVALANYITEGVIGRYTG CCEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LNDWIVKITDGKAQGLTFQFILGVITSPFMWLIGVPSQDIMLVGSLLGQKTILNEFVAYF CCCEEEEEECCCCCCHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHH QLQQWKDAGLFMYEKSILMSTYILCGFANISSIGILLGGLGVLAPEKRGLISRIGVPAMI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHH GGALVSVLSATIIGMILG HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]