Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150008416

Identifier: 150008416

GI number: 150008416

Start: 2145751

End: 2146539

Strand: Reverse

Name: 150008416

Synonym: BDI_1797

Alternate gene names: NA

Gene position: 2146539-2145751 (Counterclockwise)

Preceding gene: 150008417

Following gene: 150008415

Centisome position: 44.61

GC content: 51.2

Gene sequence:

>789_bases
ATGAAATATAGTAACATACATTTAATTTATTTTTCTCCGACACACACGTCCGCCAAGATCGTTTACGCGATAGCGGAAGG
AATGGGTGCCACTTCGATGTCCGAGTCGGATGTCACTTGTGAGAGTCTGGATATGGAAGAGTATATTGATGATGAGCTGA
CGATTATAGCCGCTCCTGTATACGGTGGCCGTGTGGCGGAGACTGCCATGGAACGTTTTCGCATGTTCCGTTCTGCCCAC
CATGCGCCGGTAGTCCCCGTGGTATTGTATGGGAACCGGGATTATGAGGATGCCTTGAAAGAGCTCTGTGATTTAGTGTC
GGAGCAGGGGTTCGTACCTGTGGCTGCCGGAGCGTTTATCGGCGAGCATTCTTTCAGCCGCAAGGGGATGCCCATTGCCG
AGGGGCGTCCGGACGAGTCGGATCTTAAGCAGGCTACGGAATTCGGGAAAAAGATTATCGAGGAGCTGGAGAAGGTTTCC
TGCATGGAATGCTTGTCCGCCTTGGAGGTGAAAGGTAATTTCCCGTATCGGGTGAAAGGCCCTTCCACTCCTCAAGCTCC
TGTTACGGATAACGATTTATGTACGCAATGTGAGTATTGCGTGGATGTGTGTCCTACACATGCGATATCCTTGGCAGACG
AGGGTATGTATAGCGACCCGAACCTATGTATCAAATGTTGCGCCTGCGTGAAAGAGTGTCCCGAGGGCGCACGTACTTTC
GATACTCCTTACACGGCGATGCTCCATAAGAACTTTAGCGCACGCCGGGAGCCGGAGATATTCTTCTAA

Upstream 100 bases:

>100_bases
TCGGAAAAGACGGGAAGATCATTTATACGAGCAAAGGCTATACCGATGAGGAATTTGCTGAGTTAATGACTAAAATAGAG
GGTGCGTTAAAATAAGAATC

Downstream 100 bases:

>100_bases
TGGAGGACCGGGTATCCGGTATATTGTGAGGGAAAGCGTCAAAAGGCAAAAGTTCTTTTGGCGCTTTCTCTTTTTTTGTA
CCTTTGTTCGGATCGTTAAT

Product: putative ferredoxin iron-sulfur protein

Products: NA

Alternate protein names: 4Fe-4S Ferredoxin; Flavodoxin; Flavodoxin/Nitric Oxide Synthase; Iron-Sulfur Proteins

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKYSNIHLIYFSPTHTSAKIVYAIAEGMGATSMSESDVTCESLDMEEYIDDELTIIAAPVYGGRVAETAMERFRMFRSAH
HAPVVPVVLYGNRDYEDALKELCDLVSEQGFVPVAAGAFIGEHSFSRKGMPIAEGRPDESDLKQATEFGKKIIEELEKVS
CMECLSALEVKGNFPYRVKGPSTPQAPVTDNDLCTQCEYCVDVCPTHAISLADEGMYSDPNLCIKCCACVKECPEGARTF
DTPYTAMLHKNFSARREPEIFF

Sequences:

>Translated_262_residues
MKYSNIHLIYFSPTHTSAKIVYAIAEGMGATSMSESDVTCESLDMEEYIDDELTIIAAPVYGGRVAETAMERFRMFRSAH
HAPVVPVVLYGNRDYEDALKELCDLVSEQGFVPVAAGAFIGEHSFSRKGMPIAEGRPDESDLKQATEFGKKIIEELEKVS
CMECLSALEVKGNFPYRVKGPSTPQAPVTDNDLCTQCEYCVDVCPTHAISLADEGMYSDPNLCIKCCACVKECPEGARTF
DTPYTAMLHKNFSARREPEIFF
>Mature_262_residues
MKYSNIHLIYFSPTHTSAKIVYAIAEGMGATSMSESDVTCESLDMEEYIDDELTIIAAPVYGGRVAETAMERFRMFRSAH
HAPVVPVVLYGNRDYEDALKELCDLVSEQGFVPVAAGAFIGEHSFSRKGMPIAEGRPDESDLKQATEFGKKIIEELEKVS
CMECLSALEVKGNFPYRVKGPSTPQAPVTDNDLCTQCEYCVDVCPTHAISLADEGMYSDPNLCIKCCACVKECPEGARTF
DTPYTAMLHKNFSARREPEIFF

Specific function: Unknown

COG id: COG2221

COG function: function code C; Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29021; Mature: 29021

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSNIHLIYFSPTHTSAKIVYAIAEGMGATSMSESDVTCESLDMEEYIDDELTIIAAPV
CCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCCCEEEEEECC
YGGRVAETAMERFRMFRSAHHAPVVPVVLYGNRDYEDALKELCDLVSEQGFVPVAAGAFI
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHH
GEHSFSRKGMPIAEGRPDESDLKQATEFGKKIIEELEKVSCMECLSALEVKGNFPYRVKG
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
PSTPQAPVTDNDLCTQCEYCVDVCPTHAISLADEGMYSDPNLCIKCCACVKECPEGARTF
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
DTPYTAMLHKNFSARREPEIFF
CCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKYSNIHLIYFSPTHTSAKIVYAIAEGMGATSMSESDVTCESLDMEEYIDDELTIIAAPV
CCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCCCEEEEEECC
YGGRVAETAMERFRMFRSAHHAPVVPVVLYGNRDYEDALKELCDLVSEQGFVPVAAGAFI
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHH
GEHSFSRKGMPIAEGRPDESDLKQATEFGKKIIEELEKVSCMECLSALEVKGNFPYRVKG
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
PSTPQAPVTDNDLCTQCEYCVDVCPTHAISLADEGMYSDPNLCIKCCACVKECPEGARTF
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
DTPYTAMLHKNFSARREPEIFF
CCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA