| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008411
Identifier: 150008411
GI number: 150008411
Start: 2133013
End: 2134458
Strand: Reverse
Name: 150008411
Synonym: BDI_1787
Alternate gene names: NA
Gene position: 2134458-2133013 (Counterclockwise)
Preceding gene: 150008412
Following gene: 150008406
Centisome position: 44.36
GC content: 47.37
Gene sequence:
>1446_bases ATGGTTCTCTTTTCTTTATTAATGGTCTTGATTTGCTTGAACGCATGTTCTGGAGCGAAGATCTCGGACAATGTAACGGT GTATGTCACGACAAACGATCGTGCGAAAGATTTCGTGAGAAGTGAGATCGCCTTGGGGGACAAACAAGCCGCCTCGCCTT GCGTGATAACGATAGACCCTTCGGTGCGCTATCAGACGATGGATGGCTTTGGTGCCGCCGTGACAGGCTCTACCTGCTAT AACTTGATGCGGATGGCTCCCGAGGATCGGACAGCTTTCCTGAAAGAGACTTTCTCTGATACGGAGGGGATGGGGTATAG CTATATCCGTATCTCGATTGGCTGCTCGGACTTTTCTTTAAGTGAGTATACTTGTTGTGACACGAAGGGTGTCGAGAATT TCGCCTTGCAGAGCGAGGAGAAGGAGTATGTGATACCGATCTTGAAGGAGATCTTGGCGATCAGCCCTTCTATAAAAATC TTGGGATCGCCTTGGACTTGTCCAAGATGGATGAAGGTGGATAACTTAAAGGATTTGCGCCCGTTCGAGTCGTGGACTAG CGGACAGTTGAATCCCGCTTATTATCAAGATTACGCTACCTATTTCGTGAAATGGATACAGGCGATGGAGGCCGAGGGGA TTCCTATCGAGGCGATAACTCCCCAAAACGAACCTTTGAACCGAGGAAATTCCGCTTCCTTATTTATGGGATGGGAGGAG CAACTCTCTTTCGTGCGTGACGCTCTAGGCCCTAAACTGAAAGAGACTGGCCTCAAGACGAAGATCTACGCTTTCGACCA TAATTACAATTACGATAATATGTTGGAGCAGCAAGGCTATCCGATGAAAATCTACGAGGATGAGAATGCCGCTTCTTTCC TGACAGGTGCCGCTTACCATAATTACGGGGGCGACCGGGAGGAGTTGAATAACGTAAACGGCAAGTTCCCCGATAAAGAA TTAATATTTACGGAAACTTCTATCGGCATGTGGAATGATGGACGTAACTTAGAGAAACGCTTGATGGAAGATATGGAGGA GACGGCCTTGGGTACGGTGAATAACTGGTGTAAGGCAGTTATCGTATGGAACTTGATGCTGGATAACGAGCGGGGACCGA ACCGAGAGGGTGGTTGCCAGACTTGTTATGGTGCCGTGGATATCGATCGCTCGGATTATAAGACGATTACCCGGAATTCT CATTATTATATTATCGGTCATTTATCCTCTGTGGTGAAGCCGGGGGCAGTACGGATCGGCTCTAAAGGGTATACGGCTGA TGGGATTATGTATTCCGCCTTCGAGAATTTAGATGGAACGGAAGCGCTCGTATTACTAAATAATACGGACGGGACTAAAA ATATAACGGTAAACAGTGGCGAACGTTCGTTTACCTATGAGGTTCCCGCTAAAGCAGTCGCTTCTTTCCGTTGGAATCTT TACTAA
Upstream 100 bases:
>100_bases CGATGGCCGCTCCCGCCTTTCACATCTTAAAGAATCACGTGAGGATGATCTTGAAGGGTTCAGAAACCCGGTAATTTGAT TAACTATTAATTTAATACGT
Downstream 100 bases:
>100_bases TAGGAGGGGGTGTTAAAAGTTGGTATTATGGCACGCAGATTTAGCAGATTTACGCAGATAATATATTGATTTTCATGTCA TAAATCTGCGGTCATCTGCT
Product: beta-glycosidase
Products: NA
Alternate protein names: Glucan Endo-1 6-Beta-Glucosidase; Glycoside Hydrolase Family; O-Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; O-Glycosyl Hydrolase; Glycosyl Hydrolase; Ricin B Lectin; O-Glycosyl Hydrolase Family Protein; Glycoside Hydrolase; Lysosomal Glucosyl Ceramidase-Like Protein; Glycosy Hydrolase Family Protein; Glucan EndO-1 6-Beta-Glucosidase; Helix-Turn-Helix AraC Type; Glycosyl Hydrolase Family; LPXTG-Motif Cell Wall Anchor Domain Protein; Glycosyl Hydrolases Family; Endo-1 6-Beta-D-Glucanase; Cellulosome Protein Dockerin Type I
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MVLFSLLMVLICLNACSGAKISDNVTVYVTTNDRAKDFVRSEIALGDKQAASPCVITIDPSVRYQTMDGFGAAVTGSTCY NLMRMAPEDRTAFLKETFSDTEGMGYSYIRISIGCSDFSLSEYTCCDTKGVENFALQSEEKEYVIPILKEILAISPSIKI LGSPWTCPRWMKVDNLKDLRPFESWTSGQLNPAYYQDYATYFVKWIQAMEAEGIPIEAITPQNEPLNRGNSASLFMGWEE QLSFVRDALGPKLKETGLKTKIYAFDHNYNYDNMLEQQGYPMKIYEDENAASFLTGAAYHNYGGDREELNNVNGKFPDKE LIFTETSIGMWNDGRNLEKRLMEDMEETALGTVNNWCKAVIVWNLMLDNERGPNREGGCQTCYGAVDIDRSDYKTITRNS HYYIIGHLSSVVKPGAVRIGSKGYTADGIMYSAFENLDGTEALVLLNNTDGTKNITVNSGERSFTYEVPAKAVASFRWNL Y
Sequences:
>Translated_481_residues MVLFSLLMVLICLNACSGAKISDNVTVYVTTNDRAKDFVRSEIALGDKQAASPCVITIDPSVRYQTMDGFGAAVTGSTCY NLMRMAPEDRTAFLKETFSDTEGMGYSYIRISIGCSDFSLSEYTCCDTKGVENFALQSEEKEYVIPILKEILAISPSIKI LGSPWTCPRWMKVDNLKDLRPFESWTSGQLNPAYYQDYATYFVKWIQAMEAEGIPIEAITPQNEPLNRGNSASLFMGWEE QLSFVRDALGPKLKETGLKTKIYAFDHNYNYDNMLEQQGYPMKIYEDENAASFLTGAAYHNYGGDREELNNVNGKFPDKE LIFTETSIGMWNDGRNLEKRLMEDMEETALGTVNNWCKAVIVWNLMLDNERGPNREGGCQTCYGAVDIDRSDYKTITRNS HYYIIGHLSSVVKPGAVRIGSKGYTADGIMYSAFENLDGTEALVLLNNTDGTKNITVNSGERSFTYEVPAKAVASFRWNL Y >Mature_481_residues MVLFSLLMVLICLNACSGAKISDNVTVYVTTNDRAKDFVRSEIALGDKQAASPCVITIDPSVRYQTMDGFGAAVTGSTCY NLMRMAPEDRTAFLKETFSDTEGMGYSYIRISIGCSDFSLSEYTCCDTKGVENFALQSEEKEYVIPILKEILAISPSIKI LGSPWTCPRWMKVDNLKDLRPFESWTSGQLNPAYYQDYATYFVKWIQAMEAEGIPIEAITPQNEPLNRGNSASLFMGWEE QLSFVRDALGPKLKETGLKTKIYAFDHNYNYDNMLEQQGYPMKIYEDENAASFLTGAAYHNYGGDREELNNVNGKFPDKE LIFTETSIGMWNDGRNLEKRLMEDMEETALGTVNNWCKAVIVWNLMLDNERGPNREGGCQTCYGAVDIDRSDYKTITRNS HYYIIGHLSSVVKPGAVRIGSKGYTADGIMYSAFENLDGTEALVLLNNTDGTKNITVNSGERSFTYEVPAKAVASFRWNL Y
Specific function: Unknown
COG id: COG5520
COG function: function code M; O-Glycosyl hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI54607043, Length=472, Percent_Identity=25.8474576271186, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI54607045, Length=472, Percent_Identity=25.8474576271186, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI54607047, Length=472, Percent_Identity=25.8474576271186, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI284807150, Length=470, Percent_Identity=25.7446808510638, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI284807152, Length=406, Percent_Identity=25.1231527093596, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17542884, Length=469, Percent_Identity=28.997867803838, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI115532470, Length=499, Percent_Identity=26.25250501002, Blast_Score=148, Evalue=5e-36, Organism=Caenorhabditis elegans, GI115532472, Length=472, Percent_Identity=26.9067796610169, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI193204210, Length=407, Percent_Identity=28.992628992629, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17539758, Length=464, Percent_Identity=25.4310344827586, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17539756, Length=461, Percent_Identity=24.9457700650759, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI25151335, Length=354, Percent_Identity=27.683615819209, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI161078544, Length=438, Percent_Identity=27.3972602739726, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI21355305, Length=489, Percent_Identity=27.19836400818, Blast_Score=138, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53985; Mature: 53985
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLFSLLMVLICLNACSGAKISDNVTVYVTTNDRAKDFVRSEIALGDKQAASPCVITIDP CHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECC SVRYQTMDGFGAAVTGSTCYNLMRMAPEDRTAFLKETFSDTEGMGYSYIRISIGCSDFSL CEEEEECCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCC SEYTCCDTKGVENFALQSEEKEYVIPILKEILAISPSIKILGSPWTCPRWMKVDNLKDLR CCEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEECCCCCCCC PFESWTSGQLNPAYYQDYATYFVKWIQAMEAEGIPIEAITPQNEPLNRGNSASLFMGWEE CCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEECHHH QLSFVRDALGPKLKETGLKTKIYAFDHNYNYDNMLEQQGYPMKIYEDENAASFLTGAAYH HHHHHHHHHCCCHHHCCCEEEEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHCCCHHH NYGGDREELNNVNGKFPDKELIFTETSIGMWNDGRNLEKRLMEDMEETALGTVNNWCKAV CCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE IVWNLMLDNERGPNREGGCQTCYGAVDIDRSDYKTITRNSHYYIIGHLSSVVKPGAVRIG EEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCEEEEEEHHHHCCCCCEEEC SKGYTADGIMYSAFENLDGTEALVLLNNTDGTKNITVNSGERSFTYEVPAKAVASFRWNL CCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEECCHHHHHHHCCCC Y C >Mature Secondary Structure MVLFSLLMVLICLNACSGAKISDNVTVYVTTNDRAKDFVRSEIALGDKQAASPCVITIDP CHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECC SVRYQTMDGFGAAVTGSTCYNLMRMAPEDRTAFLKETFSDTEGMGYSYIRISIGCSDFSL CEEEEECCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCC SEYTCCDTKGVENFALQSEEKEYVIPILKEILAISPSIKILGSPWTCPRWMKVDNLKDLR CCEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEECCCCCCCC PFESWTSGQLNPAYYQDYATYFVKWIQAMEAEGIPIEAITPQNEPLNRGNSASLFMGWEE CCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEECHHH QLSFVRDALGPKLKETGLKTKIYAFDHNYNYDNMLEQQGYPMKIYEDENAASFLTGAAYH HHHHHHHHHCCCHHHCCCEEEEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHCCCHHH NYGGDREELNNVNGKFPDKELIFTETSIGMWNDGRNLEKRLMEDMEETALGTVNNWCKAV CCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE IVWNLMLDNERGPNREGGCQTCYGAVDIDRSDYKTITRNSHYYIIGHLSSVVKPGAVRIG EEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCEEEEEEHHHHCCCCCEEEC SKGYTADGIMYSAFENLDGTEALVLLNNTDGTKNITVNSGERSFTYEVPAKAVASFRWNL CCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEECCHHHHHHHCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA