| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008409
Identifier: 150008409
GI number: 150008409
Start: 2129725
End: 2131221
Strand: Direct
Name: 150008409
Synonym: BDI_1785
Alternate gene names: NA
Gene position: 2129725-2131221 (Clockwise)
Preceding gene: 150008408
Following gene: 150008410
Centisome position: 44.26
GC content: 51.04
Gene sequence:
>1497_bases ATGAGATATAAAAGAATCAGATCAATCATCATGGCAGGTGTACTGGGGATGCTAAACGTCCTTTTCGCTTACTCCCAGCC GGCCGATAGTTTAGGCTATTATCTGGAACTGGCGGCACGTAACAATCCGCAGATCAACGCCGACTTCTCCCTGTATAAGG CATCTTTGGAGAAAGTCCCGCAAGCCGGAGCCTATCCGGACCCGGAACTGGAGATCGGTTTCTTCCTGAAACCGATGGAG ATCTTGTCCGGAAAGCAAATAGCGGATTTCACCTTGATGCAAATGTTCCCTTGGTTCGGTACCCGGAAGGCGGCCCGCAA CGAGGCGACCGAGATGGCCCGGATGGCTTACGAACAATTCCGTAACAGTCGCAACAACCTGTATTATGAGGTGAAGAGTC AATGGTACCAGCTTTGCAATATCAGCGAGCAATATAAAAATACGCAGGCGAACCTTCGTCTGCTAGACCAGTTGGAACAG TTGGCATTGAACCGCTTCTCCGCTCCGTCGGCGAAGGCGGGCGGTTCCTCCGTCCTACCCTCCCCCGTATCTTCTGCTCC ATCGACTCCTCCCGCCGTATCCGGTGGAGGTATGTCGGGTATGGGAGGCAGTAGCATGGGAAGCCCTACGGTACAAAGCA CGGGAGCATCCGGTAGTACGATGTCCGGAATGTCCGGCGATAGCCCTATGGGTGGAGGCTCTATGGGAAGTGGCAACTCC ATAGGCGGAATGTCGGACGTACTGCGAATCCAGATGGAGAAGGTAGAACTGGAGAATACGCTAGCCTCCTTGTTATCGCA ACGGAAAACGGCCGAGGCTGCTTTTAATACGTTGCTCAATCAGTCGCTAGCTACCCCGATTTCCGTCCCCGACTCGTTGG AACGGCTTCCTCTCTCATGGAGTGAGTCGATGGCTCTCGACAGCGTCATCTCCAACAACCCCATGCTTACCATGCTGGAG GCGGAAGGAAACGCTTACCGGGCCAAGGCGGAGATGGACAAGAAAATGAGTTACCCCATGCTAGGTATCGGCCTCCAGTA TTCCTTGATCGGGAAGAAACCAGAGGATATGTCTATGGGCTCTATGTCCGGTATGAACGGAAAGGATATGTTCATGCCCA TGCTAAAGATCAGCCTTCCTATCTTCCGTAAGAAATATAACGCACAGCAACGGGAAAGCAAGCATTATTGGAAATCCAGC GAGTTGAAGTACGAGAACACGATGAACCAACTGCAAGCCGAGTATATCCGTATTACCCAGCAATTGGAAGATGCCGCACG GAAAATCGATTTGTACCAGAAACAATACGATCTATCGTTGGCCACCTACCAACTGATCGTCCGGGAATTCTCGACAGGAA GAACGACCTTGACCGACGTGATCCAAGTGGAGCGACAAATGTTGGACTATCACTTAAAGAAAAGCGAAGCGATAGCGGAA TATAATACCCAAATCGCCGGAATCGAGAAATTAATATCCACCTCTGTAAACGAATAA
Upstream 100 bases:
>100_bases AGCATGACCATGTTTGTCGTTCCCGTCCTGCAATGCTGGTGGCGGGAGAACGCTATAAAGAAAGAACAAAAGAATAAAAT TCAAGAGGAGGTAACGACTT
Downstream 100 bases:
>100_bases GAAAATGAAAAATATAAATGAAACCGTAAAATCCAAGTACCTGATATATATCCTGTTCCTAGCGGGCGGCCTCTTGTTGG GCTGGCTCCTGTTCCATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal Ion Efflux Outer Membrane Protein Family Protein
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MRYKRIRSIIMAGVLGMLNVLFAYSQPADSLGYYLELAARNNPQINADFSLYKASLEKVPQAGAYPDPELEIGFFLKPME ILSGKQIADFTLMQMFPWFGTRKAARNEATEMARMAYEQFRNSRNNLYYEVKSQWYQLCNISEQYKNTQANLRLLDQLEQ LALNRFSAPSAKAGGSSVLPSPVSSAPSTPPAVSGGGMSGMGGSSMGSPTVQSTGASGSTMSGMSGDSPMGGGSMGSGNS IGGMSDVLRIQMEKVELENTLASLLSQRKTAEAAFNTLLNQSLATPISVPDSLERLPLSWSESMALDSVISNNPMLTMLE AEGNAYRAKAEMDKKMSYPMLGIGLQYSLIGKKPEDMSMGSMSGMNGKDMFMPMLKISLPIFRKKYNAQQRESKHYWKSS ELKYENTMNQLQAEYIRITQQLEDAARKIDLYQKQYDLSLATYQLIVREFSTGRTTLTDVIQVERQMLDYHLKKSEAIAE YNTQIAGIEKLISTSVNE
Sequences:
>Translated_498_residues MRYKRIRSIIMAGVLGMLNVLFAYSQPADSLGYYLELAARNNPQINADFSLYKASLEKVPQAGAYPDPELEIGFFLKPME ILSGKQIADFTLMQMFPWFGTRKAARNEATEMARMAYEQFRNSRNNLYYEVKSQWYQLCNISEQYKNTQANLRLLDQLEQ LALNRFSAPSAKAGGSSVLPSPVSSAPSTPPAVSGGGMSGMGGSSMGSPTVQSTGASGSTMSGMSGDSPMGGGSMGSGNS IGGMSDVLRIQMEKVELENTLASLLSQRKTAEAAFNTLLNQSLATPISVPDSLERLPLSWSESMALDSVISNNPMLTMLE AEGNAYRAKAEMDKKMSYPMLGIGLQYSLIGKKPEDMSMGSMSGMNGKDMFMPMLKISLPIFRKKYNAQQRESKHYWKSS ELKYENTMNQLQAEYIRITQQLEDAARKIDLYQKQYDLSLATYQLIVREFSTGRTTLTDVIQVERQMLDYHLKKSEAIAE YNTQIAGIEKLISTSVNE >Mature_498_residues MRYKRIRSIIMAGVLGMLNVLFAYSQPADSLGYYLELAARNNPQINADFSLYKASLEKVPQAGAYPDPELEIGFFLKPME ILSGKQIADFTLMQMFPWFGTRKAARNEATEMARMAYEQFRNSRNNLYYEVKSQWYQLCNISEQYKNTQANLRLLDQLEQ LALNRFSAPSAKAGGSSVLPSPVSSAPSTPPAVSGGGMSGMGGSSMGSPTVQSTGASGSTMSGMSGDSPMGGGSMGSGNS IGGMSDVLRIQMEKVELENTLASLLSQRKTAEAAFNTLLNQSLATPISVPDSLERLPLSWSESMALDSVISNNPMLTMLE AEGNAYRAKAEMDKKMSYPMLGIGLQYSLIGKKPEDMSMGSMSGMNGKDMFMPMLKISLPIFRKKYNAQQRESKHYWKSS ELKYENTMNQLQAEYIRITQQLEDAARKIDLYQKQYDLSLATYQLIVREFSTGRTTLTDVIQVERQMLDYHLKKSEAIAE YNTQIAGIEKLISTSVNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55176; Mature: 55176
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYKRIRSIIMAGVLGMLNVLFAYSQPADSLGYYLELAARNNPQINADFSLYKASLEKVP CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCC QAGAYPDPELEIGFFLKPMEILSGKQIADFTLMQMFPWFGTRKAARNEATEMARMAYEQF CCCCCCCCCCEEEEEECHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RNSRNNLYYEVKSQWYQLCNISEQYKNTQANLRLLDQLEQLALNRFSAPSAKAGGSSVLP HCCCCCEEEHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SPVSSAPSTPPAVSGGGMSGMGGSSMGSPTVQSTGASGSTMSGMSGDSPMGGGSMGSGNS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IGGMSDVLRIQMEKVELENTLASLLSQRKTAEAAFNTLLNQSLATPISVPDSLERLPLSW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC SESMALDSVISNNPMLTMLEAEGNAYRAKAEMDKKMSYPMLGIGLQYSLIGKKPEDMSMG HHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCC SMSGMNGKDMFMPMLKISLPIFRKKYNAQQRESKHYWKSSELKYENTMNQLQAEYIRITQ CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QLEDAARKIDLYQKQYDLSLATYQLIVREFSTGRTTLTDVIQVERQMLDYHLKKSEAIAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YNTQIAGIEKLISTSVNE HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRYKRIRSIIMAGVLGMLNVLFAYSQPADSLGYYLELAARNNPQINADFSLYKASLEKVP CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCC QAGAYPDPELEIGFFLKPMEILSGKQIADFTLMQMFPWFGTRKAARNEATEMARMAYEQF CCCCCCCCCCEEEEEECHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RNSRNNLYYEVKSQWYQLCNISEQYKNTQANLRLLDQLEQLALNRFSAPSAKAGGSSVLP HCCCCCEEEHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SPVSSAPSTPPAVSGGGMSGMGGSSMGSPTVQSTGASGSTMSGMSGDSPMGGGSMGSGNS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IGGMSDVLRIQMEKVELENTLASLLSQRKTAEAAFNTLLNQSLATPISVPDSLERLPLSW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC SESMALDSVISNNPMLTMLEAEGNAYRAKAEMDKKMSYPMLGIGLQYSLIGKKPEDMSMG HHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCC SMSGMNGKDMFMPMLKISLPIFRKKYNAQQRESKHYWKSSELKYENTMNQLQAEYIRITQ CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QLEDAARKIDLYQKQYDLSLATYQLIVREFSTGRTTLTDVIQVERQMLDYHLKKSEAIAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YNTQIAGIEKLISTSVNE HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA