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The map label for this gene is glgB [H]

Identifier: 150008352

GI number: 150008352

Start: 2039964

End: 2041982

Strand: Reverse

Name: glgB [H]

Synonym: BDI_1726

Alternate gene names: 150008352

Gene position: 2041982-2039964 (Counterclockwise)

Preceding gene: 150008355

Following gene: 150008351

Centisome position: 42.44

GC content: 46.66

Gene sequence:

>2019_bases
ATGGAGTCTCTAAATCTGATAAAAAATGACCCGTGGCTGGCCCCTTATGAGGCGGCTATAGAAGGCCGGTATCAATACGT
GATTGATAAAGAAAAGAGCTTGACGAATAATGGTAAACTAACTTTATCCGAGATGGCTTCCGGATATCTTTATTTTGGGT
TACACAAAACCACGAAAGGCTGGGTGTTCCGTGAATGGGCGCCGAATGCTACCGCTATTTATTTGATCGGAACATTCAAC
GGATGGCAGAAAGATAATAAATACAAGCTTAAACGTAAGGCGAATGGCATATGGGAGATCGCTTTGACCGATGCGCAGAT
GTGTCATGAGGACTTGTTTAAGTTGCTGGTCGAGTGGGACGGCGGTAGCGGAGAACGTATTCCCGCATGGACTCGCCGGG
TGGTGCAAGATGAGCAATCTAAGATATTTAGCGCTCAAGTATGGAACCCGGAGAAACCTTATAAATTCAAGAATAAACGA
TTCAAACCTAAGAAGTCTCCCCTTTTGATCTACGAGTGCCATATCGGTATGAGCACTAACGAGGAGAAGGTGGGGACGTA
TAATGAATTCCGTCAAAATATATTGCCTCGTGTAGCGAAGGATGGTTATAACGCCATTCAGATCATGGCTATACAAGAAC
ATCCTTATTATGGATCGTTCGGCTATCACGTAAGTAGCTTCTTCGCTGCCTCTTCCCGTTTCGGTACGCCGGACGAGTTG
AAACAACTGATCGACGAGGCGCACGGGATGGGTATCGCCGTGATCATGGACATCGTACATAGCCACGCCGTAAAGAACGA
GGTGGAGGGATTAGGCCGCTTTGACGGTTCGTATGACCAATATTTCCTGAGTGGCGAACGCCGTGAGCATCCGGCATGGG
ATTCCCTGTGCTTCAATTATGGAAAGAACGAGGTGCTTCATTTCTTATTGTCGAATTGTAAGTTCTGGCTGGAGGAGTAT
AAGTTCGATGGTTTCCGTTTCGACGGCGTGACCTCCATGCTTTACTACAGCCATGGCTTGGGCGAGGCTTTCTGTAATTA
CGGCGATTATTTTAATGGCCACCAAGATGGCGACGCTATCGCTTATCTAACCTTGGCCAATAAATTGATCCATGAGGTGA
ATCCGGGCGCTATAACGATCGCCGAGGAGGTGAGTGGCATGCCGGGTTTGGCAGCCAAGGTCGAAGATGGTGGTTATGGC
TTTGATTATCGCATGGCCATGAACATCCCGGATTATTGGATCAAGACGATCAAGGAAAAGAAGGATGAGGATTGGCATCC
GTCTTCGATCTGGTGGGAGACGACGAACCGTCGTGCCGATGAGAAGACGATCAGTTATGCCGAGAGCCACGATCAAGCCT
TGGTGGGTGATAAGACGATCATCTTCCGCTTGATCGACGCCGATATGTATTGGCATATGCAAAAAGATGACCATAATTTC
ATGGTAGATAGAGGTATCGCCTTGCATAAGATGATCCGTTTGGTTACGGCTTCTACCATTAATGGCGGTTATCTGAACTT
CATGGGAAATGAGTTTGGGCATCCGGAGTGGATCGACTTCCCAAGGGAGGGCAATGGATGGTCTTATAAATACGCTCGCC
GCCAATGGAATTTGGTGGACAACTTGGATTTGAAGTACCATTTCTTGGGCGATTTCGACCGTGAGATGTTGGAATTGATC
GGGGATGTGAAGAATTTCCAAGATACCCCTATCCAGAAGGTTTGGGATAATGATGGCGATCAGATATTGGCTTATATGCG
TAAAGACTTGGTTTTTGTGTTCAACTTTAGCCCGACGAAATCGTTCACGGATTACGGTTTCTTGGTTCCGAAGGGAGAAT
ATGAGGTCGTATTGAACACTGACGCTACCCGTTTCGGGGGGTTTGGCTTGGCTGATGATACCATAAGGCATTTCACGCAA
TTTGATCCGTTATATAAGAAAGAAAAGAAAGAATGGCTGAAACTTTATATCCCGGCACGTAGCGCCGTCGTATTAAGGAA
AGTGAAGGTCAAAAAGTAA

Upstream 100 bases:

>100_bases
ATCTTTATACGGTTTACCGCGAATATAAGAAATATCCTAATATTATCAATGGGTATGTTTTTTTCTTTTATCTTTGCCGA
GAACCAAATTATAATAAATC

Downstream 100 bases:

>100_bases
AACTCTATACACAAAACACGTTATGTTATATCCATTTACATTTAAGCCGATCCTCAAGAAGGTGATTTGGGGCGGTTCAG
ATATCTGCCCGTTTAAGGGT

Product: 1,4-alpha-glucan branching protein

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 672; Mature: 672

Protein sequence:

>672_residues
MESLNLIKNDPWLAPYEAAIEGRYQYVIDKEKSLTNNGKLTLSEMASGYLYFGLHKTTKGWVFREWAPNATAIYLIGTFN
GWQKDNKYKLKRKANGIWEIALTDAQMCHEDLFKLLVEWDGGSGERIPAWTRRVVQDEQSKIFSAQVWNPEKPYKFKNKR
FKPKKSPLLIYECHIGMSTNEEKVGTYNEFRQNILPRVAKDGYNAIQIMAIQEHPYYGSFGYHVSSFFAASSRFGTPDEL
KQLIDEAHGMGIAVIMDIVHSHAVKNEVEGLGRFDGSYDQYFLSGERREHPAWDSLCFNYGKNEVLHFLLSNCKFWLEEY
KFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGHQDGDAIAYLTLANKLIHEVNPGAITIAEEVSGMPGLAAKVEDGGYG
FDYRMAMNIPDYWIKTIKEKKDEDWHPSSIWWETTNRRADEKTISYAESHDQALVGDKTIIFRLIDADMYWHMQKDDHNF
MVDRGIALHKMIRLVTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSYKYARRQWNLVDNLDLKYHFLGDFDREMLELI
GDVKNFQDTPIQKVWDNDGDQILAYMRKDLVFVFNFSPTKSFTDYGFLVPKGEYEVVLNTDATRFGGFGLADDTIRHFTQ
FDPLYKKEKKEWLKLYIPARSAVVLRKVKVKK

Sequences:

>Translated_672_residues
MESLNLIKNDPWLAPYEAAIEGRYQYVIDKEKSLTNNGKLTLSEMASGYLYFGLHKTTKGWVFREWAPNATAIYLIGTFN
GWQKDNKYKLKRKANGIWEIALTDAQMCHEDLFKLLVEWDGGSGERIPAWTRRVVQDEQSKIFSAQVWNPEKPYKFKNKR
FKPKKSPLLIYECHIGMSTNEEKVGTYNEFRQNILPRVAKDGYNAIQIMAIQEHPYYGSFGYHVSSFFAASSRFGTPDEL
KQLIDEAHGMGIAVIMDIVHSHAVKNEVEGLGRFDGSYDQYFLSGERREHPAWDSLCFNYGKNEVLHFLLSNCKFWLEEY
KFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGHQDGDAIAYLTLANKLIHEVNPGAITIAEEVSGMPGLAAKVEDGGYG
FDYRMAMNIPDYWIKTIKEKKDEDWHPSSIWWETTNRRADEKTISYAESHDQALVGDKTIIFRLIDADMYWHMQKDDHNF
MVDRGIALHKMIRLVTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSYKYARRQWNLVDNLDLKYHFLGDFDREMLELI
GDVKNFQDTPIQKVWDNDGDQILAYMRKDLVFVFNFSPTKSFTDYGFLVPKGEYEVVLNTDATRFGGFGLADDTIRHFTQ
FDPLYKKEKKEWLKLYIPARSAVVLRKVKVKK
>Mature_672_residues
MESLNLIKNDPWLAPYEAAIEGRYQYVIDKEKSLTNNGKLTLSEMASGYLYFGLHKTTKGWVFREWAPNATAIYLIGTFN
GWQKDNKYKLKRKANGIWEIALTDAQMCHEDLFKLLVEWDGGSGERIPAWTRRVVQDEQSKIFSAQVWNPEKPYKFKNKR
FKPKKSPLLIYECHIGMSTNEEKVGTYNEFRQNILPRVAKDGYNAIQIMAIQEHPYYGSFGYHVSSFFAASSRFGTPDEL
KQLIDEAHGMGIAVIMDIVHSHAVKNEVEGLGRFDGSYDQYFLSGERREHPAWDSLCFNYGKNEVLHFLLSNCKFWLEEY
KFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGHQDGDAIAYLTLANKLIHEVNPGAITIAEEVSGMPGLAAKVEDGGYG
FDYRMAMNIPDYWIKTIKEKKDEDWHPSSIWWETTNRRADEKTISYAESHDQALVGDKTIIFRLIDADMYWHMQKDDHNF
MVDRGIALHKMIRLVTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSYKYARRQWNLVDNLDLKYHFLGDFDREMLELI
GDVKNFQDTPIQKVWDNDGDQILAYMRKDLVFVFNFSPTKSFTDYGFLVPKGEYEVVLNTDATRFGGFGLADDTIRHFTQ
FDPLYKKEKKEWLKLYIPARSAVVLRKVKVKK

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=683, Percent_Identity=47.1449487554905, Blast_Score=595, Evalue=1e-170,
Organism=Escherichia coli, GI1789839, Length=654, Percent_Identity=26.9113149847095, Blast_Score=187, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17554896, Length=676, Percent_Identity=45.5621301775148, Blast_Score=575, Evalue=1e-164,
Organism=Caenorhabditis elegans, GI32564391, Length=603, Percent_Identity=46.6003316749585, Blast_Score=539, Evalue=1e-153,
Organism=Saccharomyces cerevisiae, GI6320826, Length=694, Percent_Identity=47.9827089337176, Blast_Score=580, Evalue=1e-166,
Organism=Drosophila melanogaster, GI28573410, Length=679, Percent_Identity=45.360824742268, Blast_Score=576, Evalue=1e-164,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 77965; Mature: 77965

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLNLIKNDPWLAPYEAAIEGRYQYVIDKEKSLTNNGKLTLSEMASGYLYFGLHKTTKG
CCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEHHHHHCCEEEEEEEECCCC
WVFREWAPNATAIYLIGTFNGWQKDNKYKLKRKANGIWEIALTDAQMCHEDLFKLLVEWD
CEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHEEEEC
GGSGERIPAWTRRVVQDEQSKIFSAQVWNPEKPYKFKNKRFKPKKSPLLIYECHIGMSTN
CCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
EEKVGTYNEFRQNILPRVAKDGYNAIQIMAIQEHPYYGSFGYHVSSFFAASSRFGTPDEL
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHH
KQLIDEAHGMGIAVIMDIVHSHAVKNEVEGLGRFDGSYDQYFLSGERREHPAWDSLCFNY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHC
GKNEVLHFLLSNCKFWLEEYKFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGHQDGDAI
CHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEE
AYLTLANKLIHEVNPGAITIAEEVSGMPGLAAKVEDGGYGFDYRMAMNIPDYWIKTIKEK
EHHHHHHHHHHHCCCCEEEEHHHHCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHC
KDEDWHPSSIWWETTNRRADEKTISYAESHDQALVGDKTIIFRLIDADMYWHMQKDDHNF
CCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEECCCEEEEEEECCCEEEEEECCCCCE
MVDRGIALHKMIRLVTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSYKYARRQWNLVD
EEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
NLDLKYHFLGDFDREMLELIGDVKNFQDTPIQKVWDNDGDQILAYMRKDLVFVFNFSPTK
CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCEEEEEECCCCC
SFTDYGFLVPKGEYEVVLNTDATRFGGFGLADDTIRHFTQFDPLYKKEKKEWLKLYIPAR
CCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCEEEEEECCC
SAVVLRKVKVKK
CEEEHHHHCCCC
>Mature Secondary Structure
MESLNLIKNDPWLAPYEAAIEGRYQYVIDKEKSLTNNGKLTLSEMASGYLYFGLHKTTKG
CCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEHHHHHCCEEEEEEEECCCC
WVFREWAPNATAIYLIGTFNGWQKDNKYKLKRKANGIWEIALTDAQMCHEDLFKLLVEWD
CEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHEEEEC
GGSGERIPAWTRRVVQDEQSKIFSAQVWNPEKPYKFKNKRFKPKKSPLLIYECHIGMSTN
CCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
EEKVGTYNEFRQNILPRVAKDGYNAIQIMAIQEHPYYGSFGYHVSSFFAASSRFGTPDEL
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHH
KQLIDEAHGMGIAVIMDIVHSHAVKNEVEGLGRFDGSYDQYFLSGERREHPAWDSLCFNY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHC
GKNEVLHFLLSNCKFWLEEYKFDGFRFDGVTSMLYYSHGLGEAFCNYGDYFNGHQDGDAI
CHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEE
AYLTLANKLIHEVNPGAITIAEEVSGMPGLAAKVEDGGYGFDYRMAMNIPDYWIKTIKEK
EHHHHHHHHHHHCCCCEEEEHHHHCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHC
KDEDWHPSSIWWETTNRRADEKTISYAESHDQALVGDKTIIFRLIDADMYWHMQKDDHNF
CCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEECCCEEEEEEECCCEEEEEECCCCCE
MVDRGIALHKMIRLVTASTINGGYLNFMGNEFGHPEWIDFPREGNGWSYKYARRQWNLVD
EEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
NLDLKYHFLGDFDREMLELIGDVKNFQDTPIQKVWDNDGDQILAYMRKDLVFVFNFSPTK
CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCEEEEEECCCCC
SFTDYGFLVPKGEYEVVLNTDATRFGGFGLADDTIRHFTQFDPLYKKEKKEWLKLYIPAR
CCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCEEEEEECCC
SAVVLRKVKVKK
CEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA